Carg15920 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTATTTCTTAGTTCCCTTTTCACTTTTTGCTTTGTTTTCAAGGATTCGAGATGGAAACCGAAGTCAACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGAGCGTTCATACGGTTCGTTCCATCTCTCTGTAAACAATCAGTCTTATGTTTGTTTAATGTTTAAAATGCTTCCAGGGTTAATATGGTAATTGATCGAATTGTTACTTTGAAGTATTTTTAAGTGGGTATAGTATCTATAGACTCGATTTCCCGTGTTTAGTCGGGATATAAAGTACACAGCTCAAATACCTTAACAAAAATTTAGGGACTAAACTTGTCATTAAACATATCTTAACGTTTTTGCAGGATTTGAGTCGGACAATACACCGAGTTCGACCTGGGAAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGTAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATGGAAATGTCGTGGGCTATAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGAGTTGAGCTTAGACATTTTCTTATCCCTTCTAAATATTTCTAAGTTTTATTTGTGTATTAACATTTAATTATTTATTATATTAGTTCATGTGAGATTGTGATATGTGGGTTATGTCACTTATGAAATAAAGTTATGCATAATTTTGATTATGTTTTAATATATAAATATAAATAAATAAATAAATATATTTGGGCTTCCACATGGCCCAATTATTGTTGGGCCTAATATGTAGGTCAATGATCCACCAATTAAAGCCCAATTCAGTCTTGCCCATGCCGAAACTAAAGCCCATACCCAAAATCGCGTGTTCTTCAAGCCCAGGTGTAAATTTAGAGTTCGATGAGAGATTCTTCTTCATAAGCCACTGTGCCTAATCGCCCATTTCCTTCCAATTTTCCGGCGAAATCTGTCTATCATCAACTAATTCACGGCCACCAAGTGGTATTCTTCAATTTGATAGTCGAGGATCTTGTATCAGCTAGGCTTATCTCCATGGCTTCCGCAATTCTGAAGCGTGTCAACGCCTCCGCAATGAGCTCGCTGGTTGAATCTATGCGAATCCGAGCTTCATCACGAGCCTTTGCGGCGGTGGCGGTCGGGACTGATATCGTCTCCGCCTCACCGGATGTTTCTCTTCAGAAGGCTCGGAGCTGGGACGAAGGTGTCTCCTCCAAGTTCTCAACGACTCCGCTTAAAGACATTTTCAAGGTCCGTTCTTAGATTGTTCGTGTATTTCTAACTCGCATTTTCTTTTGAGGTTAATTGTGTTAGTTTTTGAAGTATTGTTGTGCATTTTAGATAAAACAAAAATGTTTGATTGTTTATGAAATTGTGGGCTTTCAAGGTCAGATTTGAGCTTAATGTTTATGTTTGACGCTTTATATGGAATGATAATTTGAATGTATTCAGTCTTTATCTTATTAATCCATTGGTCATGGTATTTCAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGTAAGTCCATCTATTCAGTATTTTACAGTTGTATACATGCTATGTAAATGATGAATTCTGTACGAAATAGTTGCCGACGTATAAGTCTTCATCTCGTTTTCAACGCGGTGTGCTTCTTTGATTGGAACAAGAGCTTTTATATGCGCACTTTCATGATCAATACTTTCATCCATTGGTAAAATGAAGATTTCTTTTAGGGATCAGAAACATGCTTCGTGGTTCATCATTCATTTCTGACCTCTAAAGGATTGATTGGATATTGAGAAAAAATTTGTTAGATTTGTACAGAGAATATATGAACTTTATTTTGTACTGGTAGCTGATAAATATTTGATATATAAAACCTTATGATTCAATGAATTGTTAGCTTTATGCGATTGTGGCAGTAAATAAAGAGATTTGAACTCTGGTGAGTTCTTTATTCCAAACTAGCTTTCATCAGTTGGATCCAAGATCCAACATCGATTGGGGTGGGAAATGAAGCAATCCATATAAGAGTGTGGAAACCTCTCTCTAGTAGACGCATTTTAAAATCTTGAGAGGAAATCCAGAAGGGAAAGTCCAAAGAGGACTAATATCTGCTAGTAGTGGGTTTGGACCGTTACAAATGGTATCAGAGCCAGTCACTTACTTAGGCCTAGACCCTCTCCATAGTAGCCACGTATTAAAACTTTGAGGGGAGGCTCGAAAGGAAAAGTCCAAAAAGGACAATATTTGCTAATGGTGGGCTTGGACTATTACAGATCAACTCTATGGGACTTGATGTGATAGATATTAGATTATATAAGATCGAGAACAACACTGCTCTTATTTCTTCCCTTGGGAAGGAGTGAATAATTGAGAAAATCAAGCACAACCTCTTCTTTTGATCTTGAAAATTAAAAAATGGAAAGAAGCTGCTACTTATCATCAAACAACATTTAGCATTTAACATAATATTCAATGTTTTTGTCCTGTTTAAGTGGGTAATCATGGCATTTTGTTGAAGCTTGCTTGTACATTGTAAGTCATAAATATTCAATCGTTGATGAATGTGGAGTAGATATAAAATTGCTCTTTCTCTGTGTTTTCCAGTGTTAAATTCGTTTATACTATGATGCACATTTCAAAGTTGCATTTCCAATTTCCAGGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGCTACAAGAATAAAATGGATGAGTTCAAGGCTAAGGGAATTGATTCTGTTATTTGCGTGTCTGTAAATGACCCATATACTCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTGTAAGCTTCCTTGTCCAGACTTATAATATAGAAAGCTGCATAATTTTCATAATAATACAATCCTGACATTATCCTCTTTGTTCTAAATAGATACAATTTTACGGTGACTTCGACGGGAGCTTTCACAAGAGCCTGGAACTGAATAAAGATCTTTCTGTTGCTTTGCTCGGCCCTCGTTCTCAAAGGTACGATCGATCAATCTTGTTCTCGACATGCCAAAAGTGGTTGGATTGTGTAGGGCTGTTCTAGTTTTGGATGGAGTCCAAGTAGGTAGACAATTCTACACTCTTTGATGTTCTTCTTCTTTGTAGATGGTCAGCTTATGTTGTAGATGGGACGGTTAAGGCTCTTAACATAGAGGAAGCTCCATCTGACTTTAAGGTTACCGGGGCAGAGGTCATTTTGGATCAAATTTAGAGTCAGTTTCATGGAACCAGCACAATCTCTTGGATTCCAAATAAGATCATGCCTGTACATGAGTAATGTATCCCAGAGGCTTTCTTTTTTTGGTTGGTTTTCTTAAGTTAATCCCAGGTGATGATAGCTTGGACGCTTGGATTTCAGTTATTGTTCTTCGTATATAAAATGTTTTTGACTTGGATTCAGAAACTGGCGAATATGGAAATGAGAATTCTCCCTTCCTTAGTTTTCTATCTATTTGCAAATGCCAGACACCTTTAATTCTCCATTCTGAGGTCGGGAGTGATAGCTGTAATTAGGGTTATATGATGAATCCAACAAACCAAATCGACCTAACCCGAATTATTGGAGTTGGGTTGAGTTAGATTAGTATTGGGTAATTCTTTTAGAACCC ACTCTATTTCTTAGTTCCCTTTTCACTTTTTGCTTTGTTTTCAAGGATTCGAGATGGAAACCGAAGTCAACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGAGCGTTCATACGGATTTGAGTCGGACAATACACCGAGTTCGACCTGGGAAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGTAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATGGAAATGTCGTGGGCTATAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGATCGAGGATCTTGTATCAGCTAGGCTTATCTCCATGGCTTCCGCAATTCTGAAGCGTGTCAACGCCTCCGCAATGAGCTCGCTGGTTGAATCTATGCGAATCCGAGCTTCATCACGAGCCTTTGCGGCGGTGGCGGTCGGGACTGATATCGTCTCCGCCTCACCGGATGTTTCTCTTCAGAAGGCTCGGAGCTGGGACGAAGGTGTCTCCTCCAAGTTCTCAACGACTCCGCTTAAAGACATTTTCAAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGCTACAAGAATAAAATGGATGAGTTCAAGGCTAAGGGAATTGATTCTGTTATTTGCGTGTCTGTAAATGACCCATATACTCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTACGGTGACTTCGACGGGAGCTTTCACAAGAGCCTGGAACTGAATAAAGATCTTTCTGTTGCTTTGCTCGGCCCTCGTTCTCAAAGATGGTCAGCTTATGTTGTAGATGGGACGGTTAAGGCTCTTAACATAGAGGAAGCTCCATCTGACTTTAAGGTTACCGGGGCAGAGGTCATTTTGGATCAAATTTAGAGTCAGTTTCATGGAACCAGCACAATCTCTTGGATTCCAAATAAGATCATGCCTGTACATGAGTAATGTATCCCAGAGGCTTTCTTTTTTTGGTTGGTTTTCTTAAGTTAATCCCAGGTGATGATAGCTTGGACGCTTGGATTTCAGTTATTGTTCTTCGTATATAAAATGTTTTTGACTTGGATTCAGAAACTGGCGAATATGGAAATGAGAATTCTCCCTTCCTTAGTTTTCTATCTATTTGCAAATGCCAGACACCTTTAATTCTCCATTCTGAGGTCGGGAGTGATAGCTGTAATTAGGGTTATATGATGAATCCAACAAACCAAATCGACCTAACCCGAATTATTGGAGTTGGGTTGAGTTAGATTAGTATTGGGTAATTCTTTTAGAACCC ATGGAAACCGAAGTCAACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGAGCGTTCATACGGATTTGAGTCGGACAATACACCGAGTTCGACCTGGGAAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGTAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATGGAAATGTCGTGGGCTATAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGATCGAGGATCTTGTATCAGCTAGGCTTATCTCCATGGCTTCCGCAATTCTGAAGCGTGTCAACGCCTCCGCAATGAGCTCGCTGGTTGAATCTATGCGAATCCGAGCTTCATCACGAGCCTTTGCGGCGGTGGCGGTCGGGACTGATATCGTCTCCGCCTCACCGGATGTTTCTCTTCAGAAGGCTCGGAGCTGGGACGAAGGTGTCTCCTCCAAGTTCTCAACGACTCCGCTTAAAGACATTTTCAAGGGCAAGAAGGTCGTCATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGCTACAAGAATAAAATGGATGAGTTCAAGGCTAAGGGAATTGATTCTGTTATTTGCGTGTCTGTAAATGACCCATATACTCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTATACAATTTTACGGTGACTTCGACGGGAGCTTTCACAAGAGCCTGGAACTGAATAAAGATCTTTCTGTTGCTTTGCTCGGCCCTCGTTCTCAAAGATGGTCAGCTTATGTTGTAGATGGGACGGTTAAGGCTCTTAACATAGAGGAAGCTCCATCTGACTTTAAGGTTACCGGGGCAGAGGTCATTTTGGATCAAATTTAG METEVNDDDLLFAELTRRISLLIMDDDELPSVHTDLSRTIHRVRPGKLPLMVDYENGFVRESKGTGVFIPTRLPSPKRKHGNVVGYRIKSENKRLNSQPSSTYYFKPKKIEDLVSARLISMASAILKRVNASAMSSLVESMRIRASSRAFAAVAVGTDIVSASPDVSLQKARSWDEGVSSKFSTTPLKDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKNKMDEFKAKGIDSVICVSVNDPYTLNGWAEKLEAKDAIQFYGDFDGSFHKSLELNKDLSVALLGPRSQRWSAYVVDGTVKALNIEEAPSDFKVTGAEVILDQI Homology
BLAST of Carg15920 vs. NCBI nr
Match: KAG7026252.1 (Peroxiredoxin-2F, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 630.2 bits (1624), Expect = 9.9e-177 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
BLAST of Carg15920 vs. NCBI nr
Match: KAG6593909.1 (Peroxiredoxin-2F, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 403.3 bits (1035), Expect = 2.0e-108 Identity = 205/209 (98.09%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg15920 vs. NCBI nr
Match: XP_022930454.1 (peroxiredoxin-2F, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 391.0 bits (1003), Expect = 1.0e-104 Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of Carg15920 vs. NCBI nr
Match: XP_023514800.1 (peroxiredoxin-2F, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023521926.1 peroxiredoxin-2F, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389.0 bits (998), Expect = 3.9e-104 Identity = 197/201 (98.01%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of Carg15920 vs. NCBI nr
Match: XP_022999884.1 (peroxiredoxin-2F, mitochondrial [Cucurbita maxima]) HSP 1 Score: 387.5 bits (994), Expect = 1.1e-103 Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy Swiss-Prot
Match: Q9M7T0 (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRXIIF PE=1 SV=2) HSP 1 Score: 320.9 bits (821), Expect = 1.7e-86 Identity = 160/201 (79.60%), Postives = 175/201 (87.06%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy Swiss-Prot
Match: Q9SDD6 (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=PRXIIF PE=2 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 5.8e-79 Identity = 146/201 (72.64%), Postives = 168/201 (83.58%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy Swiss-Prot
Match: Q69TY4 (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PRXIIE-1 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-26 Identity = 74/206 (35.92%), Postives = 116/206 (56.31%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy Swiss-Prot
Match: Q9FR35 (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica OX=39947 GN=PRXIIC PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.8e-26 Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy Swiss-Prot
Match: O22711 (Peroxiredoxin-2D OS=Arabidopsis thaliana OX=3702 GN=PRXIID PE=2 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.5e-23 Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy TrEMBL
Match: A0A6J1ERF8 (Glutaredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111436895 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 4.9e-105 Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy TrEMBL
Match: A0A6J1KID1 (Glutaredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111494225 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 5.4e-104 Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy TrEMBL
Match: A0A6J1H5T0 (Glutaredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111460375 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.8e-100 Identity = 188/201 (93.53%), Postives = 198/201 (98.51%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy TrEMBL
Match: A0A6J1L053 (Glutaredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111499169 PE=3 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.4e-99 Identity = 187/201 (93.03%), Postives = 198/201 (98.51%), Query Frame = 0
BLAST of Carg15920 vs. ExPASy TrEMBL
Match: A0A5A7SS80 (Glutaredoxin-dependent peroxiredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00700 PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 2.6e-98 Identity = 185/201 (92.04%), Postives = 196/201 (97.51%), Query Frame = 0
BLAST of Carg15920 vs. TAIR 10
Match: AT3G06050.1 (peroxiredoxin IIF ) HSP 1 Score: 320.9 bits (821), Expect = 1.2e-87 Identity = 160/201 (79.60%), Postives = 175/201 (87.06%), Query Frame = 0
BLAST of Carg15920 vs. TAIR 10
Match: AT1G60740.1 (Thioredoxin superfamily protein ) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-24 Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of Carg15920 vs. TAIR 10
Match: AT1G65980.1 (thioredoxin-dependent peroxidase 1 ) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24 Identity = 61/168 (36.31%), Postives = 94/168 (55.95%), Query Frame = 0
BLAST of Carg15920 vs. TAIR 10
Match: AT1G65970.1 (thioredoxin-dependent peroxidase 2 ) HSP 1 Score: 109.4 bits (272), Expect = 5.5e-24 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of Carg15920 vs. TAIR 10
Match: AT3G52960.1 (Thioredoxin superfamily protein ) HSP 1 Score: 107.5 bits (267), Expect = 2.1e-23 Identity = 62/178 (34.83%), Postives = 95/178 (53.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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