Carg15875 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15875
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr08: 6863140 .. 6864060 (+)
RNA-Seq Expression	Carg15875
Synteny	Carg15875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCCTTTTCTTTTCTCCCAAAACAAAAAAAAAAAAAAAGAAATGGATTCCAAGCTCTCCGATCTCAATCTCGGAGCCACCGAGCTCCGCCTCGGCCTACCAGGAACCGCCGCCGAAAGCGACGGCTCTGCAGACAACTCTTCTGGGGTTCGAACTAACAAGAGAAATTTACAGAACGACTCTGCTCCTCCACCCAAGTATGTGCCGTTTCGATTACGACTCTTTGTTATGGTTTTTGGGTCTCTGTTTTGATTCTCAATTTGGGTTTTGTAGGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCTTTTAGGAAAAATACTCTGCTGCCAAAGAAAACAGAGGCAACCACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGATCGATGTGGGTCTCTACAAGGGGTACCCTGAACTTCTCAAGGGTTTAGAGGAGATGTTCAAGACCAGAATCGGGGCATACTGTGAAAGCGAAGGGTACCGGGGATCGGATTATGCCCCGACTTATGAAGATAAAGACGGAGATTGGATGCTGGTGGGCGATGTTCCATGGGGGTGAGTTTTTCTAATAATTCCCTGAAATTCCAAATCTGTATTTTAATTAAATTCATGAGCTTATTTGATTTGGTGATGAATTAAATGCAGGATGTTTATTTCGTCGTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTGAGAAACTAACACCTTTTTTTTTTTTAATTTACAGAACGATATGATGAATTTTTCTTCATTTTTAATTTTTGTTTTTAAGTTTTGTAAGATAAATTAGCTAATGAAATCAAATTGTAATTAACATATACTTTTATTACTACATACATTCCCGAAGTCTATTTATGGAGTGTTGTAATTACAT

mRNA sequence

CAACCCTTTTCTTTTCTCCCAAAACAAAAAAAAAAAAAAAGAAATGGATTCCAAGCTCTCCGATCTCAATCTCGGAGCCACCGAGCTCCGCCTCGGCCTACCAGGAACCGCCGCCGAAAGCGACGGCTCTGCAGACAACTCTTCTGGGGTTCGAACTAACAAGAGAAATTTACAGAACGACTCTGCTCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCTTTTAGGAAAAATACTCTGCTGCCAAAGAAAACAGAGGCAACCACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGATCGATGTGGGTCTCTACAAGGGGTACCCTGAACTTCTCAAGGGTTTAGAGGAGATGTTCAAGACCAGAATCGGGGCATACTGTGAAAGCGAAGGGTACCGGGGATCGGATTATGCCCCGACTTATGAAGATAAAGACGGAGATTGGATGCTGGTGGGCGATGTTCCATGGGGGATGTTTATTTCGTCGTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTGAGAAACTAACACCTTTTTTTTTTTTAATTTACAGAACGATATGATGAATTTTTCTTCATTTTTAATTTTTGTTTTTAAGTTTTGTAAGATAAATTAGCTAATGAAATCAAATTGTAATTAACATATACTTTTATTACTACATACATTCCCGAAGTCTATTTATGGAGTGTTGTAATTACAT

Coding sequence (CDS)

ATGGATTCCAAGCTCTCCGATCTCAATCTCGGAGCCACCGAGCTCCGCCTCGGCCTACCAGGAACCGCCGCCGAAAGCGACGGCTCTGCAGACAACTCTTCTGGGGTTCGAACTAACAAGAGAAATTTACAGAACGACTCTGCTCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCTTTTAGGAAAAATACTCTGCTGCCAAAGAAAACAGAGGCAACCACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGATCGATGTGGGTCTCTACAAGGGGTACCCTGAACTTCTCAAGGGTTTAGAGGAGATGTTCAAGACCAGAATCGGGGCATACTGTGAAAGCGAAGGGTACCGGGGATCGGATTATGCCCCGACTTATGAAGATAAAGACGGAGATTGGATGCTGGTGGGCGATGTTCCATGGGGGATGTTTATTTCGTCGTGCAAGAGGATGAGAATCATGAAAGGATCAGAAGTTGGGGGACTGAGAAACTAA

Protein sequence

MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN

Homology

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BLAST of Carg15875 vs. NCBI nr
Match: KAG6593866.1 (Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026208.1 Auxin-induced protein 22B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
           TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN
Sbjct: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 179

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BLAST of Carg15875 vs. NCBI nr
Match: XP_022930223.1 (auxin-induced protein 22B-like [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSK SDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKPSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTE+TTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTESTTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
            RIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGSEVGGLRN
Sbjct: 121 IRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWRMFISSCKRMRIMKGSEVGGLRN 179

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BLAST of Carg15875 vs. NCBI nr
Match: XP_023515196.1 (auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSKLSDLNLGATELRLGLPGTAAES+GSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKLSDLNLGATELRLGLPGTAAESNGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
            RIGAYCE EGYRGSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGSEVGGLRN
Sbjct: 121 FRIGAYCEREGYRGSDYAPTYEDKDGDWMLVGDVPWRMFISSCKRMRIMKGSEVGGLRN 179

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BLAST of Carg15875 vs. NCBI nr
Match: XP_023000550.1 (auxin-responsive protein IAA4-like [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 172/179 (96.09%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRT KR LQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTYKRILQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYP LLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPSLLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
            RIGAYCE EGYRGSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGS+VGGLRN
Sbjct: 121 FRIGAYCEREGYRGSDYAPTYEDKDGDWMLVGDVPWRMFISSCKRMRIMKGSDVGGLRN 179

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BLAST of Carg15875 vs. NCBI nr
Match: XP_022961610.1 (auxin-responsive protein IAA4-like [Cucurbita moschata])

HSP 1 Score: 315.8 bits (808), Expect = 2.3e-82
Identity = 157/180 (87.22%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MDSKLS---DLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVG 60
           MDSKLS    LNL ATELRLGLPGT    DGSADNS GVRTNKRNLQN SAPPPKSQVVG
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGT----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVG 60

Query: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEE 120
           WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK+D+G+YKGYPEL+KGLEE
Sbjct: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGYPELVKGLEE 120

Query: 121 MFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           MFK R+G Y E EGY+GSDYAPTYEDKDGDWMLVGDVPW MFISSCKR+RIMKGSEVGGL
Sbjct: 121 MFKFRMGTYREREGYQGSDYAPTYEDKDGDWMLVGDVPWQMFISSCKRLRIMKGSEVGGL 176

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BLAST of Carg15875 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.1e-58
Identity = 113/192 (58.85%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 6   SDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKR--------------------NLQN 65
           SDLNL ATELRLGLPGT  + D +    + +R NKR                    +++ 
Sbjct: 9   SDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQHVET 68

Query: 66  DSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLY 125
            SAPPPK+++VGWPPIRS+RKN++           EG GI+VKVSMDGAPYLRK+D+ +Y
Sbjct: 69  VSAPPPKAKIVGWPPIRSYRKNSV--------QEGEGDGIFVKVSMDGAPYLRKVDLKVY 128

Query: 126 KGYPELLKGLEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKR 178
            GYPELLK LE MFK  IG Y E EGY+GS+YAPTYEDKDGDWMLVGDVPW MF++SCKR
Sbjct: 129 GGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKR 188

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BLAST of Carg15875 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 6.6e-56
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 8   LNLGATELRLGLPGT-AAESDGSADNSSGVRTNKRNLQN----DSAPPPKSQVVGWPPIR 67
           +NL ATELRLGLPGT    S G ++        ++ +++    ++A PPK+Q+VGWPP+R
Sbjct: 11  VNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVR 70

Query: 68  SFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKTR 127
           S+RKN +  KK+E    +EG G YVKVSMDGAPYLRKID+ +YK YPEL+K LE MFK  
Sbjct: 71  SYRKNNVQTKKSE----SEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFS 130

Query: 128 IGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           +G Y E EGY+GSD+ PTYEDKDGDWMLVGDVPW MF+SSCKR+RIMKGSEV GL
Sbjct: 131 VGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181

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BLAST of Carg15875 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 112/183 (61.20%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 7   DLNLGATELRLGLPGT----AAESDGSADNSSGVRTNKRNLQNDS--------APPPKSQ 66
           +LNL ATELRLGLPG+       +  S   SS   +++ ++ N S         PP K+Q
Sbjct: 11  ELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVPPAKAQ 70

Query: 67  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKG 126
           VVGWPPIRS+RKN +  KK E    +EG G+YVKVSM GAPYLRKID+ +YK YPELLK 
Sbjct: 71  VVGWPPIRSYRKNNVQQKKEE---ESEGNGMYVKVSMAGAPYLRKIDLKVYKSYPELLKA 130

Query: 127 LEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEV 178
           LE MFK   G Y E EGY GS+YAPTYEDKDGDWMLVGDVPW MF+SSCKR+RIMKGSE 
Sbjct: 131 LENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEA 190

[Close]

BLAST of Carg15875 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 108/183 (59.02%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 8   LNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQND-------------SAPPPKSQ 67
           +NL  TELRLGLPGT    +     S     NKR L  D             ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 68  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKG 127
           +VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGAPYLRKID+  YKGY ELLK 
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNE--SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKA 124

Query: 128 LEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEV 178
           LE MFK  +G Y E +GY+GSD+ PTYEDKDGDWML+GDVPW MFI +CKR+RIMKGSE 
Sbjct: 125 LEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEA 184

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BLAST of Carg15875 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53
Identity = 114/203 (56.16%), Postives = 135/203 (66.50%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESD-----GSADNSSGVRTN--------KRNLQNDS 60
           M S  ++LNL ATELRLGLPG+    +     GS   SS  R++        K N+ +DS
Sbjct: 1   MGSYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDS 60

Query: 61  A-------------PPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGA 120
           +              P K QVVGWPPIRSFRKN+L  KK E     +G G+Y+KVSM GA
Sbjct: 61  SDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVE---QGDGTGMYLKVSMAGA 120

Query: 121 PYLRKIDVGLYKGYPELLKGLEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDV 178
           PYLRKID+ +YK YPELLK L+ +FK   G Y E EGY GS+YAPTYEDKDGDWMLVGDV
Sbjct: 121 PYLRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDV 180

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BLAST of Carg15875 vs. ExPASy TrEMBL
Match: A0A6J1EUG2 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111436742 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.2e-96
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSK SDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKPSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTE+TTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTESTTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
            RIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGSEVGGLRN
Sbjct: 121 IRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWRMFISSCKRMRIMKGSEVGGLRN 179

[Close]

BLAST of Carg15875 vs. ExPASy TrEMBL
Match: A0A6J1KIN8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111494790 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 172/179 (96.09%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPP 60
           MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRT KR LQNDSAPPPKSQVVGWPP
Sbjct: 1   MDSKLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTYKRILQNDSAPPPKSQVVGWPP 60

Query: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFK 120
           IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYP LLKGLEEMFK
Sbjct: 61  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPSLLKGLEEMFK 120

Query: 121 TRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGLRN 180
            RIGAYCE EGYRGSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGS+VGGLRN
Sbjct: 121 FRIGAYCEREGYRGSDYAPTYEDKDGDWMLVGDVPWRMFISSCKRMRIMKGSDVGGLRN 179

[Close]

BLAST of Carg15875 vs. ExPASy TrEMBL
Match: A0A6J1HCQ7 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 157/180 (87.22%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MDSKLS---DLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVG 60
           MDSKLS    LNL ATELRLGLPGT    DGSADNS GVRTNKRNLQN SAPPPKSQVVG
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGT----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVG 60

Query: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEE 120
           WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK+D+G+YKGYPEL+KGLEE
Sbjct: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGYPELVKGLEE 120

Query: 121 MFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           MFK R+G Y E EGY+GSDYAPTYEDKDGDWMLVGDVPW MFISSCKR+RIMKGSEVGGL
Sbjct: 121 MFKFRMGTYREREGYQGSDYAPTYEDKDGDWMLVGDVPWQMFISSCKRLRIMKGSEVGGL 176

[Close]

BLAST of Carg15875 vs. ExPASy TrEMBL
Match: A0A6J1IED3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111474863 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.5e-82
Identity = 155/180 (86.11%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MDSKLS---DLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVG 60
           MDS+LS    LNL AT+LRLGLPG     DGSADNS GVRTNKRNLQN SAPPPKSQVVG
Sbjct: 1   MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVG 60

Query: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEE 120
           WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK+D+G+YKGYPEL+KGLEE
Sbjct: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGYPELVKGLEE 120

Query: 121 MFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           MFK R+G Y E EGY+GSDYAPTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGSEVGGL
Sbjct: 121 MFKFRMGTYSEREGYQGSDYAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGL 176

[Close]

BLAST of Carg15875 vs. ExPASy TrEMBL
Match: A0A0A0LIA8 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.0e-73
Identity = 140/174 (80.46%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 6   SDLNLGATELRLGLPGTAAESDGSADNSSGVR-TNKRNLQNDSAPPPKSQVVGWPPIRSF 65
           +DLNL ATELRLGLPG  +E D S+  SS V+  NKRN QNDSAPPPK+QVVGWPPIRSF
Sbjct: 9   NDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 66  RKNTLLPKKTEA-TTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKTRI 125
           RKNTL  KKTEA TTA +GGGIYVKVSMDGAPYLRKID+ +YKGYPELLK LE+MFK  I
Sbjct: 69  RKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKFTI 128

Query: 126 GAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           G Y E EGY+GSD+APTYEDKDGDWMLVGDVPW MFISSCKRMRIMKGSEVGGL
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGL 182

[Close]

BLAST of Carg15875 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 218.4 bits (555), Expect = 4.7e-57
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 8   LNLGATELRLGLPGT-AAESDGSADNSSGVRTNKRNLQN----DSAPPPKSQVVGWPPIR 67
           +NL ATELRLGLPGT    S G ++        ++ +++    ++A PPK+Q+VGWPP+R
Sbjct: 11  VNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVR 70

Query: 68  SFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKTR 127
           S+RKN +  KK+E    +EG G YVKVSMDGAPYLRKID+ +YK YPEL+K LE MFK  
Sbjct: 71  SYRKNNVQTKKSE----SEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFS 130

Query: 128 IGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           +G Y E EGY+GSD+ PTYEDKDGDWMLVGDVPW MF+SSCKR+RIMKGSEV GL
Sbjct: 131 VGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181

[Close]

BLAST of Carg15875 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-55
Identity = 108/183 (59.02%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 8   LNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQND-------------SAPPPKSQ 67
           +NL  TELRLGLPGT    +     S     NKR L  D             ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 68  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKG 127
           +VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGAPYLRKID+  YKGY ELLK 
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNE--SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKA 124

Query: 128 LEEMFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEV 178
           LE MFK  +G Y E +GY+GSD+ PTYEDKDGDWML+GDVPW MFI +CKR+RIMKGSE 
Sbjct: 125 LEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEA 184

[Close]

BLAST of Carg15875 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 198.4 bits (503), Expect = 5.0e-51
Identity = 103/180 (57.22%), Postives = 119/180 (66.11%), Query Frame = 0


Query: 4   KLSDLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNL------QNDSAPPPKSQVVG 63
           K+++LNL  TEL LGLPG   E        S V++N + L      + +S PP K+Q+VG
Sbjct: 5   KVNELNLKDTELCLGLPG-RTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVG 64

Query: 64  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEE 123
           WPP+RS RKN                  YVKVSMDGAPYLRKID+  YK YPELLK LE 
Sbjct: 65  WPPVRSSRKN-------------NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALEN 124

Query: 124 MFKTRIGAYCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSEVGGL 178
           MFK  IG YCE EGY+GS + PTYEDKDGDWMLVGDVPW MF SSCKR+RIMKGS+   L
Sbjct: 125 MFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of Carg15875 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 98/168 (58.33%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 8   LNLGATELRLGLPGTAAES--DGSADNSSGVRTNKRNLQNDSAPPPKSQVVGWPPIRSFR 67
           LNL  TELRLGLPG   E   + S   S+  R N  + +  + PP K+Q+VGWPP+RS R
Sbjct: 7   LNLKDTELRLGLPGAQEEQQLELSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNR 66

Query: 68  KNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKTRIGA 127
           KN      +           YVKVSMDGAPYLRKID+ +YK YPELLK LE MFK  +G 
Sbjct: 67  KNNNNKNVS-----------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGE 126

Query: 128 YCESEGYRGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRMRIMKGSE 174
           Y E EGY+GS + PTYEDKDGDWMLVGDVPW MF SSC+++RIMKGSE
Sbjct: 127 YSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163

[Close]

BLAST of Carg15875 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 102/223 (45.74%), Postives = 120/223 (53.81%), Query Frame = 0


Query: 8   LNLGATELRLGLPG------TAAESDGSADNSSGV------------RTNKRNLQNDS-- 67
           +N  ATELRLGLPG       A +++G    S  V              +K +L+N    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 68  --APPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGG------------------IYV 127
              PP K+QVVGWPP+RSFRKN +  +K     A EG                     YV
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 128 KVSMDGAPYLRKIDVGLYKGYPELLKGLEEMFKT-RIGAYCES------------EGYRG 178
           KVSMDGAPYLRKID+ LYK Y +L   L +MF +  IG Y               +   G
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNG 181

The following BLAST results are available for this feature:

BLAST of Carg15875 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593866.1	1.8e-98	100.00	Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022930223.1	1.1e-95	97.77	auxin-induced protein 22B-like [Cucurbita moschata]	[more]
XP_023515196.1	1.4e-95	97.77	auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000550.1	2.9e-93	96.09	auxin-responsive protein IAA4-like [Cucurbita maxima]	[more]
XP_022961610.1	2.3e-82	87.22	auxin-responsive protein IAA4-like [Cucurbita moschata]	[more]

BLAST of Carg15875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32294	4.1e-58	58.85	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
P33077	6.6e-56	61.71	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
O24542	4.3e-55	61.20	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
Q38822	2.8e-54	59.02	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
O24543	1.1e-53	56.16	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]

BLAST of Carg15875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUG2	5.2e-96	97.77	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111436742 PE=3 SV=1	[more]
A0A6J1KIN8	1.4e-93	96.09	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111494790 PE=3 SV=1	[more]
A0A6J1HCQ7	1.1e-82	87.22	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1	[more]
A0A6J1IED3	9.5e-82	86.11	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111474863 PE=3 SV=1	[more]
A0A0A0LIA8	8.0e-73	80.46	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1	[more]

BLAST of Carg15875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	4.7e-57	61.71	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	2.0e-55	59.02	AUX/IAA transcriptional regulator family protein	[more]
AT3G23030.1	5.0e-51	57.22	indole-3-acetic acid inducible 2	[more]
AT4G14560.1	1.2e-49	58.33	indole-3-acetic acid inducible	[more]
AT3G04730.1	2.3e-40	45.74	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 79..179 e-value: 2.7E-40 score: 138.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..51
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 6..178
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 78..170
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 37..177 e-value: 4.1E-55 score: 187.3
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 6..178
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 84..171 score: 24.255136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15875-RA	Carg15875-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding