Carg15868 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGAACCACCGCACCGAAATTCTCAAACTGTTGCCACCGCCGTAACCTCCCCTAGGAGCCGCCGGATGGATTGGTTGATGGTGTTGGTGCTCATGTTTATGTATGTTGGGATATACTTAATCCACCCATTTAAACGTTTTGTGGGGAGAGATGTGATCGCCCATCTTAAATATCCATTGATGTCCGTCACTGTTCCCTTTTGGACGGTTCCAGTAAGTCATCTCTACTTGTGAGCTTATAGTAGAATAAGTCACTAACTTTAATAACTCACTAAGAAAGAGCTTATAGTAAAATAAGTTACTAACTTTGTGAATAACTTCAGGAGAATTATTAGTAGACTGGGTGGAATTGTGGGTGGAATTGTGGACTTAATGGTATTGTGGACTAAGTTTTATATTTTAATTAAGAAGACGTTAGTAATTTTAATTCTAGCTTAGAGTGAAAGTTTAGGAAACTAAGTTAGTACTTTCTCCACTCTGGAGAAGTATGCATTCTTCACGACACCATAACAAAAAATAGAGAATTAAAAAGTTAAGTGCTTAAGGTTTCTTTTCCCTTTGGTACTTGTTTCGACATAATTCCGATCATGGGTCAAATCCAACATGTTCTTTCCATTCAACTATAAACTAGATTTGCTCAATTTGAACTAGCCTAGTAAATAGAACAACAATCGTCGTTCCAAAGGTCGACAGTCCCAATTTATTCGTTATATTAAATTTTTTATAAGATTTCATTTTTAAAGTTGAGCTAAAATTACAAGAACATTTTGATTTAGAAAAGAAACTAAAGACAAGTATTTTCATAGATAATGAAAAATGTATCCTTTGAGGGAGAAAGGAGAGCCTGATAATTATTTAGTATATTGCATGGTGGTGTTAGTGGTATGCAGTTGTGGTACCAATTGCAATCTTTCTGTTGGTGTATATGCGTAGGAGAGACCCCTATCATCTTCATAATGCCATTTTAGGTGATTATGCATCAAATTTGTTTAAACCTTTTCTTTTTGCTTAATTTGTGGCTGAGCTTCTAATATGGATCACTGCAGGCATTCTCATCTCTGTGCTCGTAACAGGAGTTCTCACCGAAACAACTAAAAATGCTGTTGGTTGGCCACGCCCCGACTTCTTTTGGCGTTGCTTTCCCGATGGAAATGAAGTACGTACGCTTGTTGCTTCAAAACATGACAATTGAAACCTATTTAAATGGGGATTTGTAGAAAGGTGTATGTGAGATACCACGTCGGTTGGGGAGGAAAACACAACATTATTTATAAGGGTGTGAAAATCTCTCACTAAGCAGACGCATTTTAAAAACTTTGAGGGAAAGCCTGGGAAAACCTAAAGATGGGTGTGGAAACCTCTCCTTAGCGGATGCGTTTTAAAAACATTGAGAGGAAGTCCGAAAGAGAAAGCCCAAAGATGTGTTGGAAAAAAAGGGATAGTGAAAGAGATAGGAATAGATAGGAATAGATGAAAGCTGCCGTGCTTTATTATTGTCTACTGACTCGATGCTTAGAGGGTTACACAATTCCAGTATTTATAGCTTATACACTGGACCAGAAATAGTAAATTATGGAATTCTAGATAAATTCAAATCTACTTACCATCTCCTAAAATCTCCTAAAATCTTGGTAGTTTGAATATTTGAATCATATCTCAACTACTTTAAATCATATATTTATCCTGAATACTTTGAATCATATCTCAACACTCCCCCTTGATTCAAAGTTACAGATGTCAAGTATAGAACTTTTCTTTTGACAAGGCCTTCGTAAGTATGTCTGCCTTAACCTGTACAATGTCTGTCTCAGCCTGTATACCTTTGTTTCTTTGTCTTTCTCTATGAATCCATCTGGTGGTGTTACATAAACCTCTTCTGGTAAATCTCCATAAAACTTTTCGTTTGATAGGTCAACCATATCCCATGTTCCATCTTTCTTAACGGACTGCATCTCTACTGCCATGGCTTTCTTCCCATCTTCTTTTTCAGTTGCTTCTTCATAATTCATAGGGTATGAAATAGTAAGAGCAAACTGACATGATGCATATATGTCAGCTAAAGATTTATACTTCCTTGGAGGTGTCTCATCCGAAAGTTCTTCAAGAGAAGAAATGCTGTTCAGTGATGCTGAAGATGATGAATTTGACACACTTTGTGTTACAGTGGATGCACTGGGAGATGCACTGGAGTTGACTCTTGTCTCTTCATTTGGGGAAACTTCAACTGTAATCTTTTGCTGCTCCTGTTCTTTACTCCAACCCAACTCACGTTTTCATTAAATATTACATCTCTTCTAACTAAAATCTTTTCACTCACGGGGTTGTATAGTTTATATGCCTTTGTTTGAGTACAATAGCCAATGAAAATGCATTTTTCAGATTTTTCATCAAGCTTTTGACGAGTTTGAGGATGTTTCAAAGCATAAGCAACACAACAAAAAATTCGTAAATGACTTACCGATGGTTTCCTTCCATGCCATGCTTCATAAGGAGTTCGATTTATAACCGTCTTTGTTGGTGAAATGTTTAATAGATAAACAGATGTTGCTATGGCTTCTGCCCAAAATTGGTTTGGAAGTTTCCTTGCTTGTAATATACTTCTTGCCATCTCCACAATAGTTTCTGGAGTGTAGGGAGCTGTTAATTCCCTTTGGATGCCCTCTTCTTCACAAAACAGATTGAACTCTTTAGATATGAACTCGCCACCTTTATCTGTGCGAAGAACTTTAATGTGACAGCCACTTTGGTTCTCTACCATAGCTTTAAAAATCTGGAACTTCTGAAACGTTTCTGACTTATGTTGTAGGAAGTAAACCCAGCTCATGCGACTATAATCATCAATGAATAGTAAAAAGTATATACTCCCACCCAAGGACTTCGTTTGCATTGGCCCACATAAGTCAGCATGAATTAGTTCTAGATAATGTGAAGCTCTTTTAGCTTTTCCAACAGGAAAGGACTTCCTAATCTGCTTGCCATAAATGCATCCTTCACATAAATTAGTTGAGTCAATTCTTGGTAATCCGAAAACCATACCTTTATCCCTGAGTATTTTCAGGCTGTTCATATGAAGATGTCCATATCTGGGATGTCATAATGTTGAATCATCTTTCATGCTAGCAGTAAGAGCAAAATCCTCCATGTTAGAAACATGGAGTGGAAACATGTTATTTGAAGTCATGGCAATTTGAACTTTATGGCCTGATTTCGTGTAATGACACATGTGTTATCATCAAATAGAACTGAGTGTCCTCGGGTCATCAATTGTCCAACACTCAATAAATTGTACCCTAAATCAGGTACAAATTGAACATTATCTAATTGTTTTATCTTACCGTGACTGGTTTCGACTTTTACGGTACCTTTTCCTTCAACTTGCATCTCTTTTGTATTTTCAAGTTGCACCTTAATCTTTTGCGTCTTATCAAGCTCTTTGAATAAGGATTTGGTGCCTGTCATATGGTTCGAGCATCCGCTATCAACAAACCATAAGTTACCTTTTTCCGGATTAGTATCCATGCACGCCACAAACAGCTTTTCTTCTTCTTCTTCTTCATTCTCTGCTGCAAAATTCATTCGTTGATTTTTATACCAACAATCAGATTTTGTGTGCCCATACCTTCTACAATGGTAACATTGTATGACATTTCTTTGTTCATTGAATTGTCTCTGTCCATCACTTCTCCACCTGTTATCACGACCACCATGGAAGTTGCGAAATCCTCCTCTTCCACGACTTCTACCTACTAAATGAATATTTTCTCTTTCGTTATTGGTTGTCTCCTTCACTTGTAGTGCCTTTTCTTCGTTCCTTTCTGATGCTCTATTGATTCTTGCCTCATGAGCCTGAAGCGAGCCCATCAGTTCATCAACGGAGAGTATGGATAGATCCTTAGCTTCTTCTATGGCGGCCACCACATGGTCAAACTTTGGAGTCAAGCTTCTCAACACATTTGCAACAATTGTTTCGTTTGAAATTTTCTCTCCATAGGTACGCATCTGACTGACTATTACCATTGATCTTGACAAAAAATCAGCAATTGATTCGCCATTCGTCATGAGTAGAGTTTCAAAATCACGTCTTAGAGATTGCAATTTCACTGTCATGACCTTTGAATCTCCTAGAAACTCCTTCTGTAGAATTGACCATGCCTGCTTTGATGTGGTTGCTGCTGCAATTCGTGAAAAGATAGTCTCATGAACTGCTTGCAGAATAATGAATAGAGCCTTAGCATCGTTTTTCTTGGTTTCTCTTAGTCTCTCATTTTCTTCTATTGTGGGTTCTAATACATCAGCAAACCCGTGCTCCACCAAGTCCCATAGCTCCTACGATCTGAGCAAGGTCTTCATCTTAATGCTCCACCACTCGTATTTCTCACCATTAAAGATTAGTAACAACAGAGCAGAGGAAGAAAAACCAGCTACTACCATTTTTGTTTTCTGAAAGAAAATAATCACTCGCCCTCGTGTCGAACGAACTTGGCTCTGATACCACAATTGTTGGAAAAAAGGGATAGTGAAAGAGATAGGAATAGATAGGAATAGATGAAAGTTGCAGTGCTTTATTATTGTCTACTGACTCAATGCTTAGAGGGTTACACAATTCCAGTATTTATAGCTTATACACTGTACCAGAAATAGTAAATCATGGAAATCTAGATAAATTCAAATCTATTGACAATCTCCTGAAATCTTTTAAAATCTTGTTAGTTTGAATATTTGAATCATATCTCAACTACTTTAAATCATATATTTATCTTGAATACTTTGAATCATATTTCAACAAGATGGGTTTGGAAACCTCTCCCTAGGAGACGCGTTTTAAAAACCTTGAAGGGAAGCCTGGAAAAGGAAAGTCTAAGGAGAACAATACGTAGCAGTTGGCTTTAAGTTCTTACCATGTTTCTTGCTACTTGGGTGCCACATAGCTTATGTTGTCTGCCCCTTGAGATTTAATCAGATTTAATATCTGCTAGTGGTGGGCTTGAGTTGTTAGAGTGAATCTTGCTACTTGGGTTCTATCTTGACATAGCATCACTTATAAATGCTTATATTTTCTGCCCTTGAGATTTAATCAAATTTCATTTCGAATGTTATTCATTTGTTATATCTTTAGGTTTACGATCGAATGGGAAATGTGGTATGCCATGGGAAGAAAAGTTACGTGTTGGATGGGTACAAGAGTTTTCCAAGTGGTCATGCTTCATGTAGGCAAAAACATGCACTTTTTCTTCCCTTCACTCAACTCATTACCAATTTCAAGTCATCCCATCATATAGCTCCTAAAATATTGCCATGGAAATAGTCCTTTTTTGTAAGAAAAGAATGGTTTTGTTGGCAGGGTCATTTGCTGGTCTTGGTTTTCTCTCATTATATTTATCAGGAAAGCTGAAGGTATTTGATCATGGAGGCCATGTTGCAAAATTACTTGTGGTTCTCTTCCCTTTGTTGGTTGCTTATGTTGTTGGGATCTTTATGGTGAATGACTATATGCATCATCCCCAAGATGTCTTTTTTGGTTCTCTCATGGGTAAGTGCTTCTGATTTAATCTTTTGTTTACCTTTTCTAAAATAATTTGTAATATTTTGGTTATGGAAGAAATTATTGTTTGTGCAGGTCTTTTAGTGGCCACTCTTGTTTATTTTCAGTTCTTTCCATCCCTATTTCATCATCATCAAGGTAAGATTTCTCAAAGCTTCTTTGATTTTTGAAGCCTTTAGAATGATGTATTTGGTTTTGATGTAGATGTTTTCATCCCAACTACGGAACAATCTCGAACAAATGATCAAACAAGCGACATTCCAGTGAATGTTGTTGATAGGTCGATAGACATCGAAGCCCCTGCCCCCCTCGAAAGTAGAGAGAGGTGA ATGAGGGAACCACCGCACCGAAATTCTCAAACTGTTGCCACCGCCGTAACCTCCCCTAGGAGCCGCCGGATGGATTGGTTGATGTGGTATGCAGTTGTGGTACCAATTGCAATCTTTCTGTTGGTGTATATGCGTAGGAGAGACCCCTATCATCTTCATAATGCCATTTTAGGCATTCTCATCTCTGTGCTCGTTTACGATCGAATGGGAAATGTGGTATGCCATGGGAAGAAAAGTTACGTGTTGGATGGGTACAAGAGTTTTCCAAGTGGTCATGCTTCATGGTCATTTGCTGGTCTTGGTTTTCTCTCATTATATTTATCAGGAAAGCTGAAGGTATTTGATCATGGAGGCCATGTTGCAAAATTACTTGTGGTTCTCTTCCCTTTGTTGGTTGCTTATGTTGTTGGGATCTTTATGGTGAATGACTATATGCATCATCCCCAAGATGTCTTTTTTGGTTCTCTCATGGGTCTTTTAGTGGCCACTCTTGTTTATTTTCAGTTCTTTCCATCCCTATTTCATCATCATCAAGATGTTTTCATCCCAACTACGGAACAATCTCGAACAAATGATCAAACAAGCGACATTCCAGTGAATGTTGTTGATAGGTCGATAGACATCGAAGCCCCTGCCCCCCTCGAAAGTAGAGAGAGGTGA ATGAGGGAACCACCGCACCGAAATTCTCAAACTGTTGCCACCGCCGTAACCTCCCCTAGGAGCCGCCGGATGGATTGGTTGATGTGGTATGCAGTTGTGGTACCAATTGCAATCTTTCTGTTGGTGTATATGCGTAGGAGAGACCCCTATCATCTTCATAATGCCATTTTAGGCATTCTCATCTCTGTGCTCGTTTACGATCGAATGGGAAATGTGGTATGCCATGGGAAGAAAAGTTACGTGTTGGATGGGTACAAGAGTTTTCCAAGTGGTCATGCTTCATGGTCATTTGCTGGTCTTGGTTTTCTCTCATTATATTTATCAGGAAAGCTGAAGGTATTTGATCATGGAGGCCATGTTGCAAAATTACTTGTGGTTCTCTTCCCTTTGTTGGTTGCTTATGTTGTTGGGATCTTTATGGTGAATGACTATATGCATCATCCCCAAGATGTCTTTTTTGGTTCTCTCATGGGTCTTTTAGTGGCCACTCTTGTTTATTTTCAGTTCTTTCCATCCCTATTTCATCATCATCAAGATGTTTTCATCCCAACTACGGAACAATCTCGAACAAATGATCAAACAAGCGACATTCCAGTGAATGTTGTTGATAGGTCGATAGACATCGAAGCCCCTGCCCCCCTCGAAAGTAGAGAGAGGTGA MREPPHRNSQTVATAVTSPRSRRMDWLMWYAVVVPIAIFLLVYMRRRDPYHLHNAILGILISVLVYDRMGNVVCHGKKSYVLDGYKSFPSGHASWSFAGLGFLSLYLSGKLKVFDHGGHVAKLLVVLFPLLVAYVVGIFMVNDYMHHPQDVFFGSLMGLLVATLVYFQFFPSLFHHHQDVFIPTTEQSRTNDQTSDIPVNVVDRSIDIEAPAPLESRER Homology
BLAST of Carg15868 vs. NCBI nr
Match: KAG7026201.1 (putative lipid phosphate phosphatase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-120 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Carg15868 vs. NCBI nr
Match: XP_022955429.1 (putative lipid phosphate phosphatase 3, chloroplastic [Cucurbita moschata]) HSP 1 Score: 402.1 bits (1032), Expect = 3.0e-108 Identity = 218/293 (74.40%), Postives = 218/293 (74.40%), Query Frame = 0
BLAST of Carg15868 vs. NCBI nr
Match: XP_022980684.1 (putative lipid phosphate phosphatase 3, chloroplastic [Cucurbita maxima]) HSP 1 Score: 374.8 bits (961), Expect = 5.1e-100 Identity = 206/287 (71.78%), Postives = 209/287 (72.82%), Query Frame = 0
BLAST of Carg15868 vs. NCBI nr
Match: KAG6581739.1 (Lipid phosphate phosphatase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96 Identity = 190/227 (83.70%), Postives = 202/227 (88.99%), Query Frame = 0
BLAST of Carg15868 vs. NCBI nr
Match: XP_038879949.1 (putative lipid phosphate phosphatase 3, chloroplastic [Benincasa hispida]) HSP 1 Score: 310.8 bits (795), Expect = 9.1e-81 Identity = 177/290 (61.03%), Postives = 192/290 (66.21%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy Swiss-Prot
Match: Q8LFD1 (Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPP3 PE=2 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy Swiss-Prot
Match: Q9ZU49 (Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=LPP1 PE=2 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 9.6e-41 Identity = 88/176 (50.00%), Postives = 115/176 (65.34%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy Swiss-Prot
Match: Q9XI60 (Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=LPP2 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 9.0e-39 Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy Swiss-Prot
Match: Q0WNG6 (Probable lipid phosphate phosphatase 4 OS=Arabidopsis thaliana OX=3702 GN=LPP4 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35 Identity = 82/171 (47.95%), Postives = 105/171 (61.40%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy Swiss-Prot
Match: Q9UUA6 (Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dpp1 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20 Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy TrEMBL
Match: A0A6J1GW89 (putative lipid phosphate phosphatase 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457457 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108 Identity = 218/293 (74.40%), Postives = 218/293 (74.40%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy TrEMBL
Match: A0A6J1IZY7 (putative lipid phosphate phosphatase 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479980 PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100 Identity = 206/287 (71.78%), Postives = 209/287 (72.82%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy TrEMBL
Match: A0A5A7V7P5 (Putative lipid phosphate phosphatase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00640 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72 Identity = 174/312 (55.77%), Postives = 189/312 (60.58%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy TrEMBL
Match: A0A1S3B9L2 (putative lipid phosphate phosphatase 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487513 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72 Identity = 174/312 (55.77%), Postives = 189/312 (60.58%), Query Frame = 0
BLAST of Carg15868 vs. ExPASy TrEMBL
Match: A0A1S4DV35 (putative lipid phosphate phosphatase 3, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487513 PE=3 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 6.8e-66 Identity = 145/219 (66.21%), Postives = 156/219 (71.23%), Query Frame = 0
BLAST of Carg15868 vs. TAIR 10
Match: AT3G02600.1 (lipid phosphate phosphatase 3 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Carg15868 vs. TAIR 10
Match: AT3G02600.2 (lipid phosphate phosphatase 3 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Carg15868 vs. TAIR 10
Match: AT3G02600.3 (lipid phosphate phosphatase 3 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Carg15868 vs. TAIR 10
Match: AT3G02600.4 (lipid phosphate phosphatase 3 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Carg15868 vs. TAIR 10
Match: AT3G02600.5 (lipid phosphate phosphatase 3 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|