Carg15867 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg15867
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnon-specific lipid-transfer protein 2P-like
LocationCarg_Chr08: 6740913 .. 6741221 (-)
RNA-Seq ExpressionCarg15867
SyntenyCarg15867
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGTTTGGCATCACAGTTGTTTGCTTTTTCATGGTGGCGTTTCTCACCGGAGCCCATCACGTAGGCGCACAGCAGACGTGCGACCCTCAGCTGCTAGCCATTCCATGTGGACTTGCATTCTCTGGCATGAGACCGTCTACCCGATGCTGCAATAAGCTGAGGGAGCAACAGCCATGCTACTGTGCATACCTCAATAATCCAGATTTGAAGGGTTTTGTGGACTCTCCTGCCGCGAGAAGGATTGCTAGAGACTGCAACATTACGATCCCAACTCAGGCCGAGTGCCCTGCAAGCCCTGCTTAG

mRNA sequence

ATGAAGAAGTTTGGCATCACAGTTGTTTGCTTTTTCATGGTGGCGTTTCTCACCGGAGCCCATCACGTAGGCGCACAGCAGACGTGCGACCCTCAGCTGCTAGCCATTCCATGTGGACTTGCATTCTCTGGCATGAGACCGTCTACCCGATGCTGCAATAAGCTGAGGGAGCAACAGCCATGCTACTGTGCATACCTCAATAATCCAGATTTGAAGGGTTTTGTGGACTCTCCTGCCGCGAGAAGGATTGCTAGAGACTGCAACATTACGATCCCAACTCAGGCCGAGTGCCCTGCAAGCCCTGCTTAG

Coding sequence (CDS)

ATGAAGAAGTTTGGCATCACAGTTGTTTGCTTTTTCATGGTGGCGTTTCTCACCGGAGCCCATCACGTAGGCGCACAGCAGACGTGCGACCCTCAGCTGCTAGCCATTCCATGTGGACTTGCATTCTCTGGCATGAGACCGTCTACCCGATGCTGCAATAAGCTGAGGGAGCAACAGCCATGCTACTGTGCATACCTCAATAATCCAGATTTGAAGGGTTTTGTGGACTCTCCTGCCGCGAGAAGGATTGCTAGAGACTGCAACATTACGATCCCAACTCAGGCCGAGTGCCCTGCAAGCCCTGCTTAG

Protein sequence

MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA
Homology
BLAST of Carg15867 vs. NCBI nr
Match: KAG7026200.1 (hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.1 bits (562), Expect = 4.4e-54
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 60
           MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP
Sbjct: 1   MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 60

Query: 61  CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA 103
           CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA
Sbjct: 61  CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA 102

BLAST of Carg15867 vs. NCBI nr
Match: KAG6581747.1 (hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 60
           MKKFGITVVCFF+VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP
Sbjct: 1   MKKFGITVVCFFVVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 60

Query: 61  CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA 103
           CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA
Sbjct: 61  CYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECPASPA 102

BLAST of Carg15867 vs. NCBI nr
Match: KAE8648021.1 (hypothetical protein Csa_005848 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-23
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKL 60
           MK F IT VVC F+    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKL
Sbjct: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKL 60

Query: 61  REQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 98
           RE QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 101

BLAST of Carg15867 vs. NCBI nr
Match: KAE8649342.1 (hypothetical protein Csa_014385 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-22
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0

Query: 4   FGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQ 63
           F IT VVC F+    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKLRE 
Sbjct: 6   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKLREA 65

Query: 64  QPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 98
           QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 66  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 103

BLAST of Carg15867 vs. NCBI nr
Match: XP_008444079.1 (PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA0064163.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa] >TYK02866.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 54/104 (51.92%), Postives = 64/104 (61.54%), Query Frame = 0

Query: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAF-SGMRPSTRCCNK 60
           MK F IT VVC F+    VA L G   V AQ  CD   L+  C  AF  G  P+  CC K
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLS-SCAPAFLFGGNPNQECCTK 60

Query: 61  LREQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECP 99
           LR +QPCYC Y  +P+L+ FV+S AARR+A  CNIT PT A+CP
Sbjct: 61  LRAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADCP 103

BLAST of Carg15867 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-13
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0

Query: 3  KFGITVVCFFMVA--FLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 62
          K  ++VVC  +V   FL     V    TC+P  L+        G +PS+ CC+KL+ Q+P
Sbjct: 6  KMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEP 65

Query: 63 CYCAYLNNPDLKGFVDSPAARRIARDCNITIP 93
          C C Y+ NP LK +V+SP A+++  +C +T P
Sbjct: 66 CLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYP 97

BLAST of Carg15867 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 28 TCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARDC 87
          TC P  L+   G   SG    T CC KLREQ+PC C YL NP L+ +V+SP AR++A +C
Sbjct: 2  TCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNC 61

Query: 88 NITIP 93
           + +P
Sbjct: 62 GVPVP 66

BLAST of Carg15867 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-11
Identity = 33/92 (35.87%), Postives = 42/92 (45.65%), Query Frame = 0

Query: 1   MKKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQP 60
           M+K     V   MV  L      GA   C+P  LA+       G +PS  CC  LR QQ 
Sbjct: 9   MRKEAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG 68

Query: 61  CYCAYLNNPDLKGFVDSPAARRIARDCNITIP 93
           C C Y+ +P+   +V SP AR     C I +P
Sbjct: 69  CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVP 100

BLAST of Carg15867 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.2e-11
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 28 TCDPQLLAIPCGLAFS-GMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARD 87
          TC    L+ PC  A +    PS  CCNKL+EQ+PC C YL +P+LK +V+SP AR+ A  
Sbjct: 2  TCSAVQLS-PCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASS 61

Query: 88 CNITI 92
          C + +
Sbjct: 62 CGVAL 65

BLAST of Carg15867 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-09
Identity = 24/64 (37.50%), Postives = 33/64 (51.56%), Query Frame = 0

Query: 29 CDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARDCN 88
          C    LA+      SG +PS  CC  LR QQPC+C Y  +P    ++ SP AR   + C 
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 89 ITIP 93
          + +P
Sbjct: 62 LAVP 65

BLAST of Carg15867 vs. ExPASy TrEMBL
Match: A0A0A0KZL4 (Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa_4G146240 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.7e-24
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKL 60
           MK F IT VVC F+    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKL
Sbjct: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKL 60

Query: 61  REQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 98
           RE QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 101

BLAST of Carg15867 vs. ExPASy TrEMBL
Match: A0A5A7V7R4 (Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00730 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.5e-18
Identity = 54/104 (51.92%), Postives = 64/104 (61.54%), Query Frame = 0

Query: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAF-SGMRPSTRCCNK 60
           MK F IT VVC F+    VA L G   V AQ  CD   L+  C  AF  G  P+  CC K
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLS-SCAPAFLFGGNPNQECCTK 60

Query: 61  LREQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECP 99
           LR +QPCYC Y  +P+L+ FV+S AARR+A  CNIT PT A+CP
Sbjct: 61  LRAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADCP 103

BLAST of Carg15867 vs. ExPASy TrEMBL
Match: A0A1S3BAC3 (non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487519 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.5e-18
Identity = 54/104 (51.92%), Postives = 64/104 (61.54%), Query Frame = 0

Query: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAF-SGMRPSTRCCNK 60
           MK F IT VVC F+    VA L G   V AQ  CD   L+  C  AF  G  P+  CC K
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLS-SCAPAFLFGGNPNQECCTK 60

Query: 61  LREQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAECP 99
           LR +QPCYC Y  +P+L+ FV+S AARR+A  CNIT PT A+CP
Sbjct: 61  LRAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADCP 103

BLAST of Carg15867 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14
Identity = 44/96 (45.83%), Postives = 56/96 (58.33%), Query Frame = 0

Query: 1  MKKFGITVVCFF---MVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLRE 60
          MKKF IT+   F   MVA L+GA  V     C P  L+   G   S   PS+ CCNKLRE
Sbjct: 1  MKKFPITIAFLFMAVMVALLSGA-RVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLRE 60

Query: 61 QQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPT 94
          Q+PC C Y+ NP L+ +V SP AR++A  C +  P+
Sbjct: 61 QKPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPS 95

BLAST of Carg15867 vs. ExPASy TrEMBL
Match: A0A103Y098 (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_021620 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.7e-14
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 2  KKFGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPC-GLAFSGMRPSTRCCNKLREQQP 61
          K F   ++C  M+  L+      A  TC+PQ L +PC G   SG  PS  CC KL+ QQP
Sbjct: 3  KSFSFIILCVMMIVLLSSTQKANA-ATCNPQDL-LPCAGFLSSGAPPSKACCGKLKAQQP 62

Query: 62 CYCAYLNNPDLKGFVDSPAARRIARDCNITIP 93
          C+C Y+ NP LK +++SP A+++A  C ++IP
Sbjct: 63 CFCGYVKNPSLKQYINSPNAKKVASACGVSIP 92

BLAST of Carg15867 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 28 TCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARDC 87
          TC P  LA       S   PS  CC KLREQQPC C Y+ NP L+ +V SP AR+++  C
Sbjct: 28 TCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMRNPTLRQYVSSPNARKVSNSC 87

Query: 88 NITIPT 94
           I  P+
Sbjct: 88 KIPSPS 93

BLAST of Carg15867 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-13
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 28 TCDPQLLAIPCGLAF-SGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARD 87
          TC P  L+ PC  A  S   PS  CC KL+EQ+PC C Y+ NP L+ FV +P AR++++ 
Sbjct: 30 TCSPMQLS-PCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKS 89

Query: 88 CNITIP 93
          C + IP
Sbjct: 90 CKLPIP 94

BLAST of Carg15867 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-12
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 0

Query: 4  FGITVVCFFMVAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYC 63
          F  T++   +VA     + V A   C+P  L+        G  PS  CC+K++EQQ C C
Sbjct: 11 FTCTILLILIVA---QENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCIC 70

Query: 64 AYLNNPDLKGFVDSPAARRIARDCNITIP 93
           YL NP+ K F++SP A+ IA DC+   P
Sbjct: 71 QYLKNPNFKSFLNSPNAKIIATDCHCPYP 96

BLAST of Carg15867 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0

Query: 25  AQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIA 84
           A  TCD   L+       +G+ PST CC KL+EQQPC+C Y+ +P    +V S  A++  
Sbjct: 34  ADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTL 93

Query: 85  RDCNITIPT 94
             C +  PT
Sbjct: 94  ATCGVPYPT 102

BLAST of Carg15867 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-10
Identity = 26/66 (39.39%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 28  TCDPQLLAIPCGLAFSGMRPSTRCCNKLREQQPCYCAYLNNPDLKGFVDSPAARRIARDC 87
           TCD   L+       +G  PST CC KL+E + C C Y+ NP    +V SP AR+    C
Sbjct: 37  TCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAAC 96

Query: 88  NITIPT 94
           ++  PT
Sbjct: 97  DVAYPT 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7026200.14.4e-54100.00hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6581747.11.3e-5399.02hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8648021.11.4e-2359.80hypothetical protein Csa_005848 [Cucumis sativus][more]
KAE8649342.12.6e-2259.60hypothetical protein Csa_014385 [Cucumis sativus][more]
XP_008444079.11.1e-1751.92PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA006416... [more]
Match NameE-valueIdentityDescription
Q436812.3e-1338.04Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ... [more]
P823532.0e-1247.69Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1[more]
P201453.7e-1135.87Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 ... [more]
P868098.2e-1146.15Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811... [more]
P829015.9e-0937.50Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KZL46.7e-2459.80Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A5A7V7R45.5e-1851.92Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BAC35.5e-1851.92non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487... [more]
A0A6J1GTR01.3e-1445.83non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A103Y0983.7e-1442.39Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-... [more]
Match NameE-valueIdentityDescription
AT1G48750.11.4e-1346.97Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G18280.12.4e-1346.97Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73780.13.4e-1238.20Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38170.14.9e-1139.13Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38160.15.5e-1039.39Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 24..97
e-value: 3.3E-7
score: 30.3
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 27..94
e-value: 6.9E-18
score: 66.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 40..93
IPR033872Non-specific lipid-transfer protein type 2PANTHERPTHR33214BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 1..93
NoneNo IPR availablePANTHERPTHR33214:SF44LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATEDcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15867-RACarg15867-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport