Carg15862 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15862
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Carg_Chr08: 6605606 .. 6606800 (-)
RNA-Seq Expression	Carg15862
Synteny	Carg15862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGGGCGAAGACTCAAAGACGAGAGCGGAAGCAGGAGTTGAAATCCAGGTGCGTTTTGTGTTATATAACTTCATGCTCTGTAACCATACGGAAATGGCGTAACGCTTTTGAGGTATGGAATAATATAGGAGAGAGGAGAAATATTCTTCTTCTACAGGCCCAAAGTTGGAAAGCAACAGGTCCATGGCCCCGACGACGTGCAGCGCTTGTACATTATTCTGCGTCCGGAGTCAGGGGAGAGGGCGGTGGAGGAGAAACAACTCCCTAATGCAAGTAGCCGCCGCACCCAGGTTCACTCATTAACCCATATCTCCACTCCTTTTCACCCTTTTAGGAATATGCTTTTTGGAACTTCGAGCATGTTGTTGTTGTTCCTTGGTGCCACAACCTCTAATGCTTTGATACCACTTATTGTTGTTGTTCTTAGGCTTTAATAACTTAAGAGTTGTTTTACCTATTTTACCTAGGAAGTGAACATTGAAAAGCAACCCCTGTTGCGGTTCATGATTATGGGTCGAAAAAGCCTGCCAAACCCAGCCCAAAAGCGTCGACCATACTGGGGATTCGTAGACATGGTGACAACCAATGTCCAAGACGTCAAGGCCGCCCTCCAAGAAGGTAAACCCTCGGATCACTTCAGCATCATTTCTTTTTTAAATCCCAGCATTTCCAATGTGTAGCAGGGGAATACGACAGTTCGACGAGAGGACATCGACACATTTCGGCTGCAAGAGCTGTAGGCGAAGGCATCTACCGGTTAGTAAGGCATAAACAACCAGACACACAAAAGAGCAAGAAAAGCTACCACACACATTTGATCTACAAGCTGGAGTTTCCCTCAGAGGATGAGGAAAACGAGCCTCAAAACTCGTTTAACATTGGAAGGGAGGGCTCGTTCCTGATAATGATAAAGAACCCAGATGTAGAGGGGGATGGTTCTCGCAACAAACGAAGGGCTCAATTCCCAGCCCACCTACAAGGGGAGTTTGGGCATACGCGGTTTCACCCAGCAGACCCCCCGGACTACTTGAATTTTGAAGGGTGCGAGTTCTTGCTCATATCCGCGTCGGATGATATAGAACAGGAGCTGGGGTTGGAGCTCACCACTGCGCCCCATGAATGTGACTTGGTGAAGATGTTTGGCGAGACGACTTCCACCCAGCCTCTTCTCAAGGGCACTTGGGTCTAA

mRNA sequence

ATGGGAGAGGGCGAAGACTCAAAGACGAGAGCGGAAGCAGGAGTTGAAATCCAGGAGAGAGGAGAAATATTCTTCTTCTACAGGCCCAAAGTTGGAAAGCAACAGGTCCATGGCCCCGACGACGTGCAGCGCTTGTACATTATTCTGCGTCCGGAGTCAGGGGAGAGGGCGGTGGAGGAGAAACAACTCCCTAATGCAAGTAGCCGCCGCACCCAGGAAGTGAACATTGAAAAGCAACCCCTGTTGCGGTTCATGATTATGGGTCGAAAAAGCCTGCCAAACCCAGCCCAAAAGCGTCGACCATACTGGGGATTCGTAGACATGGTGACAACCAATGTCCAAGACGTCAAGGCCGCCCTCCAAGAAGGGGAATACGACAGTTCGACGAGAGGACATCGACACATTTCGGCTGCAAGAGCTGTAGGCGAAGGCATCTACCGGTTAGTAAGGCATAAACAACCAGACACACAAAAGAGCAAGAAAAGCTACCACACACATTTGATCTACAAGCTGGAGTTTCCCTCAGAGGATGAGGAAAACGAGCCTCAAAACTCGTTTAACATTGGAAGGGAGGGCTCGTTCCTGATAATGATAAAGAACCCAGATGTAGAGGGGGATGGTTCTCGCAACAAACGAAGGGCTCAATTCCCAGCCCACCTACAAGGGGAGTTTGGGCATACGCGGTTTCACCCAGCAGACCCCCCGGACTACTTGAATTTTGAAGGGTGCGAGTTCTTGCTCATATCCGCGTCGGATGATATAGAACAGGAGCTGGGGTTGGAGCTCACCACTGCGCCCCATGAATGTGACTTGGTGAAGATGTTTGGCGAGACGACTTCCACCCAGCCTCTTCTCAAGGGCACTTGGGTCTAA

Coding sequence (CDS)

ATGGGAGAGGGCGAAGACTCAAAGACGAGAGCGGAAGCAGGAGTTGAAATCCAGGAGAGAGGAGAAATATTCTTCTTCTACAGGCCCAAAGTTGGAAAGCAACAGGTCCATGGCCCCGACGACGTGCAGCGCTTGTACATTATTCTGCGTCCGGAGTCAGGGGAGAGGGCGGTGGAGGAGAAACAACTCCCTAATGCAAGTAGCCGCCGCACCCAGGAAGTGAACATTGAAAAGCAACCCCTGTTGCGGTTCATGATTATGGGTCGAAAAAGCCTGCCAAACCCAGCCCAAAAGCGTCGACCATACTGGGGATTCGTAGACATGGTGACAACCAATGTCCAAGACGTCAAGGCCGCCCTCCAAGAAGGGGAATACGACAGTTCGACGAGAGGACATCGACACATTTCGGCTGCAAGAGCTGTAGGCGAAGGCATCTACCGGTTAGTAAGGCATAAACAACCAGACACACAAAAGAGCAAGAAAAGCTACCACACACATTTGATCTACAAGCTGGAGTTTCCCTCAGAGGATGAGGAAAACGAGCCTCAAAACTCGTTTAACATTGGAAGGGAGGGCTCGTTCCTGATAATGATAAAGAACCCAGATGTAGAGGGGGATGGTTCTCGCAACAAACGAAGGGCTCAATTCCCAGCCCACCTACAAGGGGAGTTTGGGCATACGCGGTTTCACCCAGCAGACCCCCCGGACTACTTGAATTTTGAAGGGTGCGAGTTCTTGCTCATATCCGCGTCGGATGATATAGAACAGGAGCTGGGGTTGGAGCTCACCACTGCGCCCCATGAATGTGACTTGGTGAAGATGTTTGGCGAGACGACTTCCACCCAGCCTCTTCTCAAGGGCACTTGGGTCTAA

Protein sequence

MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEEKQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV

Homology

[Close]

BLAST of Carg15862 vs. NCBI nr
Match: KAG7026195.1 (hypothetical protein SDJN02_12694, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.8 bits (1527), Expect = 1.6e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE
Sbjct: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120
           KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL
Sbjct: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120

Query: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180
           QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN
Sbjct: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180

Query: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240
           EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF
Sbjct: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240

Query: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV
Sbjct: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Carg15862 vs. NCBI nr
Match: XP_022956009.1 (uncharacterized protein LOC111457833 isoform X1 [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 4.6e-165
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEGE+SKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE
Sbjct: 1   MGEGEESKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120
           KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL
Sbjct: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120

Query: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180
           QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN
Sbjct: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180

Query: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240
           EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF
Sbjct: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240

Query: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV
Sbjct: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Carg15862 vs. NCBI nr
Match: KAG6581755.1 (hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590.5 bits (1521), Expect = 7.9e-165
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE
Sbjct: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120
           KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL
Sbjct: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120

Query: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180
           QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN
Sbjct: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180

Query: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240
           EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF
Sbjct: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240

Query: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           EGCEFLLISASDDIEQELGLELTTAPHECDLVK FGETTSTQPLLKGTWV
Sbjct: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKTFGETTSTQPLLKGTWV 290

[Close]

BLAST of Carg15862 vs. NCBI nr
Match: XP_023527021.1 (uncharacterized protein LOC111790369 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540.4 bits (1391), Expect = 9.4e-150
Identity = 266/290 (91.72%), Postives = 273/290 (94.14%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEGE+SKT+AEAGVEIQERGEIFFFYRPKVGKQ+VHGPD VQR YIILRPESGERAVEE
Sbjct: 1   MGEGEESKTKAEAGVEIQERGEIFFFYRPKVGKQEVHGPDHVQRFYIILRPESGERAVEE 60

Query: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120
           KQLPNAS+ RTQEVNIEKQPLLRFMIMGRK LPNPAQKRRPYWGFVDMVTTNVQDVKAAL
Sbjct: 61  KQLPNASTSRTQEVNIEKQPLLRFMIMGRKRLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120

Query: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180
           QEGEY++ TRGHRHISAARAVGEGIYRLVRH + DT       HTHLIYKLEFPSEDEEN
Sbjct: 121 QEGEYETWTRGHRHISAARAVGEGIYRLVRHNKADT-------HTHLIYKLEFPSEDEEN 180

Query: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240
           EPQNSFNI REGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF
Sbjct: 181 EPQNSFNIQREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240

Query: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           EGCEFLLISASDDIEQELGLELT APHECDLVK FGETTSTQPLLKGTWV
Sbjct: 241 EGCEFLLISASDDIEQELGLELTAAPHECDLVKTFGETTSTQPLLKGTWV 283

[Close]

BLAST of Carg15862 vs. NCBI nr
Match: XP_038895444.1 (uncharacterized protein LOC120083676 [Benincasa hispida])

HSP 1 Score: 456.1 bits (1172), Expect = 2.3e-124
Identity = 228/299 (76.25%), Postives = 252/299 (84.28%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEG++SKT+AE GVEIQERGEI+FFYRPKV KQ+VH PD+VQRLYIILRPESGE+AVEE
Sbjct: 1   MGEGQESKTKAEDGVEIQERGEIYFFYRPKVEKQEVHSPDEVQRLYIILRPESGEKAVEE 60

Query: 61  KQLPNASS--------RRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTN 120
           KQ  ++SS          TQEVNIEKQPLLRF+IMGRKSLP+PAQ+ RPYWGFVDMVTT+
Sbjct: 61  KQSTSSSSTGTQRGQGTHTQEVNIEKQPLLRFIIMGRKSLPHPAQRARPYWGFVDMVTTD 120

Query: 121 VQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLE 180
           VQD+K ALQ GEYD+STRGHRHISAARA+GEGIYR++RH        K  YHTHLIYKLE
Sbjct: 121 VQDIKNALQGGEYDTSTRGHRHISAARALGEGIYRILRH------NPKNKYHTHLIYKLE 180

Query: 181 FPSEDEENEPQNSFNIGREGSFLIMIKNPDVEG-DGSRNKRRAQFPAHLQGEFGHTRFHP 240
           FPSEDE+NEPQ  FNI REGSF+I IKNPD  G  GS  KRRAQFPAHLQG+FGH  +HP
Sbjct: 181 FPSEDEKNEPQKWFNIEREGSFVIQIKNPDQGGAGGSHQKRRAQFPAHLQGQFGHKGYHP 240

Query: 241 ADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           ADPPDYLNFEGCEFLLISASDDIE+ELGLELTT   ECDLVK FGET  T+PL KGTWV
Sbjct: 241 ADPPDYLNFEGCEFLLISASDDIEEELGLELTTEGEECDLVKTFGETVPTEPLFKGTWV 293

[Close]

BLAST of Carg15862 vs. ExPASy TrEMBL
Match: A0A6J1GXU8 (uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.2e-165
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MGEGE+SKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE
Sbjct: 1   MGEGEESKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120
           KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL
Sbjct: 61  KQLPNASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAAL 120

Query: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180
           QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN
Sbjct: 121 QEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEEN 180

Query: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240
           EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF
Sbjct: 181 EPQNSFNIGREGSFLIMIKNPDVEGDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNF 240

Query: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV
Sbjct: 241 EGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Carg15862 vs. ExPASy TrEMBL
Match: A0A6J1GWN3 (uncharacterized protein LOC111457833 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 85  MIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEG 144
           MIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEG
Sbjct: 1   MIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEG 60

Query: 145 IYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVE 204
           IYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVE
Sbjct: 61  IYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVE 120

Query: 205 GDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTT 264
           GDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTT
Sbjct: 121 GDGSRNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTT 180

Query: 265 APHECDLVKMFGETTSTQPLLKGTWV 291
           APHECDLVKMFGETTSTQPLLKGTWV
Sbjct: 181 APHECDLVKMFGETTSTQPLLKGTWV 206

[Close]

BLAST of Carg15862 vs. ExPASy TrEMBL
Match: A0A5D3BUL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00100 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.9e-114
Identity = 214/296 (72.30%), Postives = 246/296 (83.11%), Query Frame = 0


Query: 1   MGEGEDS-KTRAE-AGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAV 60
           MGEGE+  KT+AE   VEIQERGEIFF YRPKV KQ+VH PD+VQRLYIILRP SGE+ V
Sbjct: 1   MGEGEEELKTKAEDHEVEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTV 60

Query: 61  EEKQLPN-ASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVK 120
           EEKQ  +   S  TQEVNI+KQPLLRF+IMGRKSLP+P+ + RPYWGFVDMVTTNVQ++K
Sbjct: 61  EEKQCKDGGQSTHTQEVNIKKQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQEIK 120

Query: 121 AALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSED 180
            ALQ  EYD+STRGHRHISAARA+GEGIYR++RH      K+K + HTHLIYKLEFP+ D
Sbjct: 121 IALQGEEYDTSTRGHRHISAARALGEGIYRILRH----NPKNKNNNHTHLIYKLEFPAAD 180

Query: 181 EENEPQNSFNIGREGSFLIMIKNPDVEGDG---SRNKRRAQFPAHLQGEFGHTRFHPADP 240
           E+NEPQ SFNI REGSF+I IKNP+  G G   S++KRRAQFPAHLQG+FGH R+ PADP
Sbjct: 181 EKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYCPADP 240

Query: 241 PDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           P++LNFEGCEFLLISASDDIEQELGLEL T   ECDLVK FG+  ST+PL +GTWV
Sbjct: 241 PEFLNFEGCEFLLISASDDIEQELGLELFTEGEECDLVKTFGDAVSTKPLFEGTWV 292

[Close]

BLAST of Carg15862 vs. ExPASy TrEMBL
Match: A0A1S3B9M2 (uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.9e-114
Identity = 214/296 (72.30%), Postives = 246/296 (83.11%), Query Frame = 0


Query: 1   MGEGEDS-KTRAE-AGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAV 60
           MGEGE+  KT+AE   VEIQERGEIFF YRPKV KQ+VH PD+VQRLYIILRP SGE+ V
Sbjct: 1   MGEGEEELKTKAEDHEVEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTV 60

Query: 61  EEKQLPN-ASSRRTQEVNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVK 120
           EEKQ  +   S  TQEVNI+KQPLLRF+IMGRKSLP+P+ + RPYWGFVDMVTTNVQ++K
Sbjct: 61  EEKQCKDGGQSTHTQEVNIKKQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQEIK 120

Query: 121 AALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSED 180
            ALQ  EYD+STRGHRHISAARA+GEGIYR++RH      K+K + HTHLIYKLEFP+ D
Sbjct: 121 IALQGEEYDTSTRGHRHISAARALGEGIYRILRH----NPKNKNNNHTHLIYKLEFPAAD 180

Query: 181 EENEPQNSFNIGREGSFLIMIKNPDVEGDG---SRNKRRAQFPAHLQGEFGHTRFHPADP 240
           E+NEPQ SFNI REGSF+I IKNP+  G G   S++KRRAQFPAHLQG+FGH R+ PADP
Sbjct: 181 EKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYCPADP 240

Query: 241 PDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLVKMFGETTSTQPLLKGTWV 291
           P++LNFEGCEFLLISASDDIEQELGLEL T   ECDLVK FG+  ST+PL +GTWV
Sbjct: 241 PEFLNFEGCEFLLISASDDIEQELGLELFTEGEECDLVKTFGDAVSTKPLFEGTWV 292

[Close]

BLAST of Carg15862 vs. ExPASy TrEMBL
Match: A0A5E4GFE8 (PREDICTED: conserved OS=Prunus dulcis OX=3755 GN=ALMOND_2B029682 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 8.6e-109
Identity = 209/325 (64.31%), Postives = 238/325 (73.23%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MG+GE+ KTRA+A VEIQERGEIFFFYRPKV K++ H PDDVQRLYI+LRPESGER +EE
Sbjct: 1   MGQGEEVKTRADAQVEIQERGEIFFFYRPKVNKEEAHSPDDVQRLYIVLRPESGERPIEE 60

Query: 61  KQLPNASSRRT------------------------QEVNIEKQPLLRFMIMGRKSLPNPA 120
           KQ P++                             QEVNIEKQPLLRF++MGRKSLP+P+
Sbjct: 61  KQEPDSGKEGAKKKGSNSGEKGSGRSQSSEGGHGRQEVNIEKQPLLRFIVMGRKSLPDPS 120

Query: 121 QKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQPDT 180
           +K RPYWGFV+MVTTN+ DVK ALQ  EYD+ T GHRH SAARA+GEGIYR+VRHK+   
Sbjct: 121 KKGRPYWGFVEMVTTNIDDVKTALQGEEYDTKTEGHRHTSAARALGEGIYRIVRHKE--- 180

Query: 181 QKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGD-------GSR 240
              KK  HTHLIYKLEFP EDE NEPQ S NI  EGSF I IKNPD  G        G +
Sbjct: 181 --GKKKPHTHLIYKLEFPPEDENNEPQESLNIKHEGSFHIQIKNPDQHGSSSTSRFRGLQ 240

Query: 241 NKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTT---AP 291
           N RRA FPAHLQG+FG+ R+ PADPPD+LN+EGCEFLLISASDDIE+ELGLEL T   A 
Sbjct: 241 NNRRAMFPAHLQGQFGNLRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELQTEGEAV 300

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BLAST of Carg15862 vs. TAIR 10
Match: AT1G16770.1 (unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-97
Identity = 184/327 (56.27%), Postives = 228/327 (69.72%), Query Frame = 0


Query: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60
           MG+G++ KTR +  VEIQERGEIFFFYRPKV K++ H  DDVQRLYI++RPESGE   EE
Sbjct: 1   MGQGKEVKTRPDPQVEIQERGEIFFFYRPKVNKEEAHSVDDVQRLYIVMRPESGENPTEE 60

Query: 61  KQLP------------------NASSRRTQ--------EVNIEKQPLLRFMIMGRKSLPN 120
           KQ P                  ++S  + Q        +VNIEKQ LLRF++MG+KSLP+
Sbjct: 61  KQDPLSGKEGSDKDSGDGEASGSSSGAKNQGEGGHGVEKVNIEKQLLLRFIVMGKKSLPD 120

Query: 121 PAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHKQP 180
           P++K +P+WGFV+MVTTNV+DVK AL+  EY++ TRGHRH   ARAVGEGIYR++RHK  
Sbjct: 121 PSKKSQPFWGFVEMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVGEGIYRILRHKPN 180

Query: 181 DTQKSKKSYHTHLIYKLEFP--SEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGS---- 240
            T+K    +HTHL+YKLEFP  S+  E+EPQ S NI  EGSFLI I+NP+  G G     
Sbjct: 181 PTRK----HHTHLVYKLEFPSVSQTREHEPQESLNIEPEGSFLIQIRNPEQGGGGRSGFG 240

Query: 241 --RNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTT-- 290
             + KR+AQFP H+Q   GHTRF PADPPD+LN+EGCE LLISASDDIE+ELG+EL    
Sbjct: 241 GLQRKRKAQFPVHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDIEEELGMELEPEG 300

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BLAST of Carg15862 vs. TAIR 10
Match: AT1G16770.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-76
Identity = 151/279 (54.12%), Postives = 188/279 (67.38%), Query Frame = 0


Query: 49  LRPESGERAVEEKQLP------------------NASSRRTQ--------EVNIEKQPLL 108
           +RPESGE   EEKQ P                  ++S  + Q        +VNIEKQ LL
Sbjct: 1   MRPESGENPTEEKQDPLSGKEGSDKDSGDGEASGSSSGAKNQGEGGHGVEKVNIEKQLLL 60

Query: 109 RFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVG 168
           RF++MG+KSLP+P++K +P+WGFV+MVTTNV+DVK AL+  EY++ TRGHRH   ARAVG
Sbjct: 61  RFIVMGKKSLPDPSKKSQPFWGFVEMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVG 120

Query: 169 EGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFP--SEDEENEPQNSFNIGREGSFLIMIKN 228
           EGIYR++RHK   T+K    +HTHL+YKLEFP  S+  E+EPQ S NI  EGSFLI I+N
Sbjct: 121 EGIYRILRHKPNPTRK----HHTHLVYKLEFPSVSQTREHEPQESLNIEPEGSFLIQIRN 180

Query: 229 PDVEGDGS------RNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDI 288
           P+  G G       + KR+AQFP H+Q   GHTRF PADPPD+LN+EGCE LLISASDDI
Sbjct: 181 PEQGGGGRSGFGGLQRKRKAQFPVHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDI 240

Query: 289 EQELGLELTT----APHECDLVKMFGETTSTQPLLKGTW 290
           E+ELG+EL          CDL+K FG+     PLL+GTW
Sbjct: 241 EEELGMELEPEGDGEESTCDLLKTFGDDVEATPLLRGTW 275

The following BLAST results are available for this feature:

BLAST of Carg15862 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026195.1	1.6e-165	100.00	hypothetical protein SDJN02_12694, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022956009.1	4.6e-165	99.66	uncharacterized protein LOC111457833 isoform X1 [Cucurbita moschata]	[more]
KAG6581755.1	7.9e-165	99.66	hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527021.1	9.4e-150	91.72	uncharacterized protein LOC111790369 [Cucurbita pepo subsp. pepo]	[more]
XP_038895444.1	2.3e-124	76.25	uncharacterized protein LOC120083676 [Benincasa hispida]	[more]

BLAST of Carg15862 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXU8	2.2e-165	99.66	uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GWN3	1.1e-116	100.00	uncharacterized protein LOC111457833 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3BUL8	8.9e-114	72.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9M2	8.9e-114	72.30	uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=...	[more]
A0A5E4GFE8	8.6e-109	64.31	PREDICTED: conserved OS=Prunus dulcis OX=3755 GN=ALMOND_2B029682 PE=4 SV=1	[more]

BLAST of Carg15862 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16770.1	2.6e-97	56.27	unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; B...	[more]
AT1G16770.2	3.3e-76	54.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34776	F17F16.3 PROTEIN	coord: 1..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15862-RA	Carg15862-RA	mRNA