Carg15816 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15816
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Polyadenylate-binding protein
Location	Carg_Chr04: 19080168 .. 19083494 (-)
RNA-Seq Expression	Carg15816
Synteny	Carg15816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAAACCAAAAAGAAAAATCTACAAATTTCCATTTTTGGAGAAGTTTAGAAACCCTAGTGATCCTGTGATCTTCTTCGGCTGTTCATCGGTAGACTGCCTCCGATTTCTGTTCTTCTATCTATCTAATTTATTTTGTTTCCGGCGGTGTTTTTTCGGTCTCGAGTCGGCGATGGCAACTCCAGTTACGGCACCGGCGGCTGTCGCTACAGTTCAAACGGCGGCGATTCCTCCGACTGACTCTGTCGCCACTGGAGGCGGATTCTTGAGTTCTTCATTGTATGTTGGCGATCTGGACCCGACTGTGGACGAGGGACAGCTTTTGGAACTGTTTAGCCAAGTGGCTCAGGTTGTCTCTATTAGGGTTTGCAGGGATCAGACAGGCAGGCAATCGCTTGGATACGCTTATGTTAATTTCAGCAATCATCAGGAAGGTTCGTTGTTTCGTTCTTTATGTTTATATGCGTCTTTAATTTTTGTTCTGTAATTTATGGATGATTTTGATATGCTTGAGTTTTGATTTTGATACTGCTGTGTTTTGTTCTGATTTTCTTCTTAGGCTATTGCATTTTGGAAATCGAAATTCGATGACTGAAAATTACGTTTGAAGAATTATTCTGGATATGTTTTGGGTTTCTGTTGTTATTGGATCAGTTTTTATTAAGTTATATATTGATTCATACTGATACACACATTCAAGTTGGATATACATATTTTTTAAAGCATCTTTTGGTTCCAAAATTTAGGCATTGAGTCTCTTATTGTATCCTTTCATAAATTTTCTCAGCTTCCAGCGCCTTGGAACATTTGAATTTCAGCCCCATTAATGGGAAGCCTATCAGGATTATGATGTCGAATCGAGATCCTAGCATCCGAAAAAGTGGCCATGCAAATGTTTTCATCAAAAATCTGGACGCATCAATTGATAACAAGGCATTGCATGATACATTTGCTACCTTCGGTCCTATTCTTTCGTGTAAAGTTGCCATTGATAGCAATGGTCAATCAAAAGGGTATGGATTTGTGCAATTTGAAAATGAGATATCTGCAAACATTGCTATAGTTAGATTGAATGGCATGCTGCTCAATGATAAGCAAGTTTTTGTTGGACATTTTATTCGACGTCAGGAAAGGATTCAGGCAAATGGATCGACATTTACTAATGTTTATGTGAAGAATTTACTGGAAACTACCACAGCTGATGACCTAAAAAATCTTTTTGCTACACATGGTGCCATTACTAGTGCAGTTGTCATGACAGATTCGAAAGGGAAGTCCAAATGTTTTGGCTTTGTGAATTTCCAGAGCCCAGACTCTGCTGCTGCTGCAGTTGAAATGTTGAATGGTACCATCCTTGGTGATGAAAAGGTTCTGTATGTAGCCAGGGCTCAGAAGAAAGTAGAAAGGGAGGCCGAGTTGAAAGCAAAATTTGAACAGGAACGAAAGAGTAGATTTGAAAAATTACAAGGTGCTAATTTGTATATAAAAAACCTTGATGACCATATTGATGATGAGAAGCTCAAAGAGTTATTCTCTGAGTATGGAACAATCACATCATGCAAGGTTCGTTTTTCTTTTGGCAACCTCCACCGTCGAAGCCTACGTGTTGACTTTTGTATAGATAGCTCTATGATTATATTTTGTTGATTTCTATGCCTGATTGAATTATTGCCAGGTTATGCTTGACCAAAATGGACTGAGCAAGGGATCTGGTTTTGTAGCATTTTCTTCGCCAGATGAAGCAACGAGAGCCGTAAATTTGTTTATTTTTTTCATTACGATCTACTTCTGGGTGTTCTACATCCGAATATGATATGAAAATGGAAACTAACTTTTCTGTTTCTTTTGTATTCTTTAGTTGAATGAATTGAATGGAAAAATGAAGGGAAGGAAACCTCTGTATGTGGCTGTTGCCCAGCACAAAGAAGAGAGAAAGGCTCGGCTCCAGGTGTGATTTTTATTCTCGAGGAATGGTCTATCGTTCTTGTTTTTTTTTTTTTTTTTCCTATGATGATTTCAGTTCTGAATTTAATAACATGGCGTTTTGATATCTATATCCAATTATGCGAATTTTGATAGTCCCATGTGGTGGATCGAAATACTTATTTACTAGTATTTTGCAAGCGGAGTTGTGGCTTTATCATGCATTTTCTATAATGTGTCAATCCTACGAATTCTGGTAATAGCATATATTCTTGTGTTCAGGCTCAATTTGCTCAAGCCAGAGCAGCTGGCGCAATATCGTCTTTGCCTTCAGGAATTCCAGGGTTTCATCCAGGTGCACCACGCCTTGCACCTCAGCAGCTGTATTATGGTCAGGGAAATCCCGGGCTGGTGCCCTCACAGCCTGCTGGATACGGCTTCCAGCCTCAACTCATGACCGGAATGCGACCTGGTATGGGTCCAAACTTCATCATGCCTTACCAATTTCAGAGGCAAGGACAGCCCGGGCCACATCCTGGGATGAGGCGAGGTGGAAATTCGCAACCATTTAATAAGCAGCAGCAGGTAACGTTGTTAAGATCATCTGTCTACTCGCTATTTTTTTAGTGTCAGTTTCATTAGTAGATACCATTTCAATATTTGTGCTGCATTTGTCTGCGATTTTGCATTACCGAGATCTATTAAAATCCTTCCTACGAGTTTTTTCGAGGGGGTCAAACCGTTGAAGCCTATGTAGAAATTTATGTACTTCGTTACCGAGTTTCTTTCCTTTTTCTTTCATTTCTTCTGATGTTTGTGTGGACTTGTTTCTTGAATCCAGTCACTGCTCCGTGGCACTGGACAAGGTTTTAGTTACATGAACAATGTACGGAATGGATTAAAGCCACCCGTCCTGCCCCCTGTTCTGCCTCAAGCTGTTGTTGGTCCAGTGATGCCTCTGACTTTTGATACTTCTGGAGTGTCTAGCTCCCCCATTGACGTCCAACGATCAAGGGTCGTGCCTTCATCAACACTCGCTTCTGCATTAGCTTCTGCTTCACCCGAAAACCAACGTGTGGTATGTCACCATTTTTCTTTCCTTCATTAGAGAAGAATGAAATCATATCTGTAAGATGAGACATGTCAAAAACTACACTTTCTACATTATATTGTTACAGATGCTCGGCGAGCAGCTGTATCCACTTGTGGAATGTCTCGAGCCAGGTCATGCAGCAAAGGTTACTGGCATGTTGCTGGAAATGGACCAACCCGAGGTCCTTCATCTCATCGAGTCACCAGATGACTTGAAGAGTAAGGTGGCTGAGGCAATGGAAGTCCTCCACAAAGCTTCATCGGAACCCGAGCTATCTGATCAGCTCGGTGCATTGGCCCTGGCCAAATGA

mRNA sequence

AATAAAAACCAAAAAGAAAAATCTACAAATTTCCATTTTTGGAGAAGTTTAGAAACCCTAGTGATCCTGTGATCTTCTTCGGCTGTTCATCGGTAGACTGCCTCCGATTTCTGTTCTTCTATCTATCTAATTTATTTTGTTTCCGGCGGTGTTTTTTCGGTCTCGAGTCGGCGATGGCAACTCCAGTTACGGCACCGGCGGCTGTCGCTACAGTTCAAACGGCGGCGATTCCTCCGACTGACTCTGTCGCCACTGGAGGCGGATTCTTGAGTTCTTCATTGTATGTTGGCGATCTGGACCCGACTGTGGACGAGGGACAGCTTTTGGAACTGTTTAGCCAAGTGGCTCAGGTTGTCTCTATTAGGGTTTGCAGGGATCAGACAGGCAGGCAATCGCTTGGATACGCTTATGTTAATTTCAGCAATCATCAGGAAGCTTCCAGCGCCTTGGAACATTTGAATTTCAGCCCCATTAATGGGAAGCCTATCAGGATTATGATGTCGAATCGAGATCCTAGCATCCGAAAAAGTGGCCATGCAAATGTTTTCATCAAAAATCTGGACGCATCAATTGATAACAAGGCATTGCATGATACATTTGCTACCTTCGGTCCTATTCTTTCGTGTAAAGTTGCCATTGATAGCAATGGTCAATCAAAAGGGTATGGATTTGTGCAATTTGAAAATGAGATATCTGCAAACATTGCTATAGTTAGATTGAATGGCATGCTGCTCAATGATAAGCAAGTTTTTGTTGGACATTTTATTCGACGTCAGGAAAGGATTCAGGCAAATGGATCGACATTTACTAATGTTTATGTGAAGAATTTACTGGAAACTACCACAGCTGATGACCTAAAAAATCTTTTTGCTACACATGGTGCCATTACTAGTGCAGTTGTCATGACAGATTCGAAAGGGAAGTCCAAATGTTTTGGCTTTGTGAATTTCCAGAGCCCAGACTCTGCTGCTGCTGCAGTTGAAATGTTGAATGGTACCATCCTTGGTGATGAAAAGGTTCTGTATGTAGCCAGGGCTCAGAAGAAAGTAGAAAGGGAGGCCGAGTTGAAAGCAAAATTTGAACAGGAACGAAAGAGTAGATTTGAAAAATTACAAGGTGCTAATTTGTATATAAAAAACCTTGATGACCATATTGATGATGAGAAGCTCAAAGAGTTATTCTCTGAGTATGGAACAATCACATCATGCAAGGTTATGCTTGACCAAAATGGACTGAGCAAGGGATCTGGTTTTGTAGCATTTTCTTCGCCAGATGAAGCAACGAGAGCCTTGAATGAATTGAATGGAAAAATGAAGGGAAGGAAACCTCTGTATGTGGCTGTTGCCCAGCACAAAGAAGAGAGAAAGGCTCGGCTCCAGGCTCAATTTGCTCAAGCCAGAGCAGCTGGCGCAATATCGTCTTTGCCTTCAGGAATTCCAGGGTTTCATCCAGGTGCACCACGCCTTGCACCTCAGCAGCTGTATTATGGTCAGGGAAATCCCGGGCTGGTGCCCTCACAGCCTGCTGGATACGGCTTCCAGCCTCAACTCATGACCGGAATGCGACCTGGTATGGGTCCAAACTTCATCATGCCTTACCAATTTCAGAGGCAAGGACAGCCCGGGCCACATCCTGGGATGAGGCGAGGTGGAAATTCGCAACCATTTAATAAGCAGCAGCAGTCACTGCTCCGTGGCACTGGACAAGGTTTTAGTTACATGAACAATGTACGGAATGGATTAAAGCCACCCGTCCTGCCCCCTGTTCTGCCTCAAGCTGTTGTTGGTCCAGTGATGCCTCTGACTTTTGATACTTCTGGAGTGTCTAGCTCCCCCATTGACGTCCAACGATCAAGGGTCGTGCCTTCATCAACACTCGCTTCTGCATTAGCTTCTGCTTCACCCGAAAACCAACGTGTGATGCTCGGCGAGCAGCTGTATCCACTTGTGGAATGTCTCGAGCCAGGTCATGCAGCAAAGGTTACTGGCATGTTGCTGGAAATGGACCAACCCGAGGTCCTTCATCTCATCGAGTCACCAGATGACTTGAAGAGTAAGGTGGCTGAGGCAATGGAAGTCCTCCACAAAGCTTCATCGGAACCCGAGCTATCTGATCAGCTCGGTGCATTGGCCCTGGCCAAATGA

Coding sequence (CDS)

ATGGCAACTCCAGTTACGGCACCGGCGGCTGTCGCTACAGTTCAAACGGCGGCGATTCCTCCGACTGACTCTGTCGCCACTGGAGGCGGATTCTTGAGTTCTTCATTGTATGTTGGCGATCTGGACCCGACTGTGGACGAGGGACAGCTTTTGGAACTGTTTAGCCAAGTGGCTCAGGTTGTCTCTATTAGGGTTTGCAGGGATCAGACAGGCAGGCAATCGCTTGGATACGCTTATGTTAATTTCAGCAATCATCAGGAAGCTTCCAGCGCCTTGGAACATTTGAATTTCAGCCCCATTAATGGGAAGCCTATCAGGATTATGATGTCGAATCGAGATCCTAGCATCCGAAAAAGTGGCCATGCAAATGTTTTCATCAAAAATCTGGACGCATCAATTGATAACAAGGCATTGCATGATACATTTGCTACCTTCGGTCCTATTCTTTCGTGTAAAGTTGCCATTGATAGCAATGGTCAATCAAAAGGGTATGGATTTGTGCAATTTGAAAATGAGATATCTGCAAACATTGCTATAGTTAGATTGAATGGCATGCTGCTCAATGATAAGCAAGTTTTTGTTGGACATTTTATTCGACGTCAGGAAAGGATTCAGGCAAATGGATCGACATTTACTAATGTTTATGTGAAGAATTTACTGGAAACTACCACAGCTGATGACCTAAAAAATCTTTTTGCTACACATGGTGCCATTACTAGTGCAGTTGTCATGACAGATTCGAAAGGGAAGTCCAAATGTTTTGGCTTTGTGAATTTCCAGAGCCCAGACTCTGCTGCTGCTGCAGTTGAAATGTTGAATGGTACCATCCTTGGTGATGAAAAGGTTCTGTATGTAGCCAGGGCTCAGAAGAAAGTAGAAAGGGAGGCCGAGTTGAAAGCAAAATTTGAACAGGAACGAAAGAGTAGATTTGAAAAATTACAAGGTGCTAATTTGTATATAAAAAACCTTGATGACCATATTGATGATGAGAAGCTCAAAGAGTTATTCTCTGAGTATGGAACAATCACATCATGCAAGGTTATGCTTGACCAAAATGGACTGAGCAAGGGATCTGGTTTTGTAGCATTTTCTTCGCCAGATGAAGCAACGAGAGCCTTGAATGAATTGAATGGAAAAATGAAGGGAAGGAAACCTCTGTATGTGGCTGTTGCCCAGCACAAAGAAGAGAGAAAGGCTCGGCTCCAGGCTCAATTTGCTCAAGCCAGAGCAGCTGGCGCAATATCGTCTTTGCCTTCAGGAATTCCAGGGTTTCATCCAGGTGCACCACGCCTTGCACCTCAGCAGCTGTATTATGGTCAGGGAAATCCCGGGCTGGTGCCCTCACAGCCTGCTGGATACGGCTTCCAGCCTCAACTCATGACCGGAATGCGACCTGGTATGGGTCCAAACTTCATCATGCCTTACCAATTTCAGAGGCAAGGACAGCCCGGGCCACATCCTGGGATGAGGCGAGGTGGAAATTCGCAACCATTTAATAAGCAGCAGCAGTCACTGCTCCGTGGCACTGGACAAGGTTTTAGTTACATGAACAATGTACGGAATGGATTAAAGCCACCCGTCCTGCCCCCTGTTCTGCCTCAAGCTGTTGTTGGTCCAGTGATGCCTCTGACTTTTGATACTTCTGGAGTGTCTAGCTCCCCCATTGACGTCCAACGATCAAGGGTCGTGCCTTCATCAACACTCGCTTCTGCATTAGCTTCTGCTTCACCCGAAAACCAACGTGTGATGCTCGGCGAGCAGCTGTATCCACTTGTGGAATGTCTCGAGCCAGGTCATGCAGCAAAGGTTACTGGCATGTTGCTGGAAATGGACCAACCCGAGGTCCTTCATCTCATCGAGTCACCAGATGACTTGAAGAGTAAGGTGGCTGAGGCAATGGAAGTCCTCCACAAAGCTTCATCGGAACCCGAGCTATCTGATCAGCTCGGTGCATTGGCCCTGGCCAAATGA

Protein sequence

MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITSAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGFVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSGIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK

Homology

[Close]

BLAST of Carg15816 vs. NCBI nr
Match: KAG7032892.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 656/656 (100.00%), Postives = 656/656 (100.00%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV
Sbjct: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS
Sbjct: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA
Sbjct: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ
Sbjct: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540
           GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV
Sbjct: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540

Query: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600
           MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA
Sbjct: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600

Query: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 656

[Close]

BLAST of Carg15816 vs. NCBI nr
Match: KAG6602210.1 (Polyadenylate-binding protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 652/656 (99.39%), Postives = 653/656 (99.54%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV
Sbjct: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS
Sbjct: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKK+EREAELKA
Sbjct: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKLEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKE FSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKEFFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQ QLMTGMRPGMGPNFIMPYQFQRQ
Sbjct: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQTQLMTGMRPGMGPNFIMPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540
           GQP PHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV
Sbjct: 481 GQPWPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540

Query: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600
           MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA
Sbjct: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600

Query: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 656

[Close]

BLAST of Carg15816 vs. NCBI nr
Match: XP_022960347.1 (polyadenylate-binding protein 3 [Cucurbita moschata] >XP_022960354.1 polyadenylate-binding protein 3 [Cucurbita moschata])

HSP 1 Score: 1256.9 bits (3251), Expect = 0.0e+00
Identity = 651/656 (99.24%), Postives = 654/656 (99.70%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV
Sbjct: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSAL+HLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALKHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS
Sbjct: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           AVVMTD KGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA
Sbjct: 241 AVVMTDLKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPL+VAVAQHKEERKARLQAQFAQARAAGAISSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLFVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFI+PYQFQRQ
Sbjct: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFILPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540
           GQPGP PGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV
Sbjct: 481 GQPGPRPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540

Query: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600
           MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA
Sbjct: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600

Query: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 656

[Close]

BLAST of Carg15816 vs. NCBI nr
Match: XP_023551080.1 (polyadenylate-binding protein 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 637/659 (96.66%), Postives = 645/659 (97.88%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPA VATVQTAAIPPTDSVAT G FLSSSLYVGDLDPTV+EGQLLELFSQVAQV
Sbjct: 1   MATPVTAPATVATVQTAAIPPTDSVATRGRFLSSSLYVGDLDPTVNEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKAL DTFATFGPILSCKVAIDSNGQSKGYGFVQFENE +ANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALQDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEEAANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVG+FIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHG ITS
Sbjct: 181 RLNGMLLNDKQVFVGNFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGDITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           A VMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKK EREAELKA
Sbjct: 241 AAVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKAEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQ+RKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQDRKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGA+SSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAMSSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           +PGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ
Sbjct: 421 LPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPF--NKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVG 540
           GQPGP PGMRRGGN QPF   +QQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQA+VG
Sbjct: 481 GQPGPRPGMRRGGNLQPFKQQQQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQALVG 540

Query: 541 PVMPLTFDTSGVSSSPIDVQRSRVVPSS-TLASALASASPENQRVMLGEQLYPLVECLEP 600
           PVMPLTFDTSGVSSSPIDVQRSRVVPSS TLASALASASPENQRVMLGEQLYPLVECLEP
Sbjct: 541 PVMPLTFDTSGVSSSPIDVQRSRVVPSSTTLASALASASPENQRVMLGEQLYPLVECLEP 600

Query: 601 GHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           GHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 GHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 659

[Close]

BLAST of Carg15816 vs. NCBI nr
Match: XP_023551071.1 (polyadenylate-binding protein 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 637/660 (96.52%), Postives = 645/660 (97.73%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPA VATVQTAAIPPTDSVAT G FLSSSLYVGDLDPTV+EGQLLELFSQVAQV
Sbjct: 1   MATPVTAPATVATVQTAAIPPTDSVATRGRFLSSSLYVGDLDPTVNEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKAL DTFATFGPILSCKVAIDSNGQSKGYGFVQFENE +ANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALQDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEEAANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVG+FIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHG ITS
Sbjct: 181 RLNGMLLNDKQVFVGNFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGDITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           A VMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKK EREAELKA
Sbjct: 241 AAVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKAEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQ+RKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQDRKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGA+SSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAMSSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           +PGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ
Sbjct: 421 LPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQ---SLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVV 540
           GQPGP PGMRRGGN QPF +QQQ   SLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQA+V
Sbjct: 481 GQPGPRPGMRRGGNLQPFKQQQQQQESLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQALV 540

Query: 541 GPVMPLTFDTSGVSSSPIDVQRSRVVPSS-TLASALASASPENQRVMLGEQLYPLVECLE 600
           GPVMPLTFDTSGVSSSPIDVQRSRVVPSS TLASALASASPENQRVMLGEQLYPLVECLE
Sbjct: 541 GPVMPLTFDTSGVSSSPIDVQRSRVVPSSTTLASALASASPENQRVMLGEQLYPLVECLE 600

Query: 601 PGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           PGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 PGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 660

[Close]

BLAST of Carg15816 vs. ExPASy Swiss-Prot
Match: O64380 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 7.2e-193
Identity = 382/646 (59.13%), Postives = 464/646 (71.83%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQT-AAIP-PTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVA 60
           M   V +P A  +VQ   +IP P+  V       +SSLY GDLDP V E  L +LF  VA
Sbjct: 14  MVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVA 73

Query: 61  QVVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRK 120
            VVS+RVCRDQ  R+SLGYAY+NFSN  +A  A+E LN++P+  +PIRIM+SNRDPS R 
Sbjct: 74  NVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRL 133

Query: 121 SGHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIA 180
           SG  N+FIKNLDASIDNKAL +TF++FG ILSCKVA+D  G+SKGYGFVQFE E SA  A
Sbjct: 134 SGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAA 193

Query: 181 IVRLNGMLLNDKQVFVGHFIRRQERIQANGS---TFTNVYVKNLLETTTADDLKNLFATH 240
           I +LNGML+NDKQVFVGHFIRRQER +   +    FTNVYVKNL +    D+L+  F   
Sbjct: 194 IDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKF 253

Query: 241 GAITSAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVERE 300
           G I+SAVVM D  G S+CFGFVNF+  ++AA+AVE +NG  LGD+ VLYV RAQKK ERE
Sbjct: 254 GVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDD-VLYVGRAQKKSERE 313

Query: 301 AELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLS 360
            EL+ KFEQER +RFEK QGANLY+KNLDD +DDEKLKE+FSEYG +TS KVML+  G+S
Sbjct: 314 EELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMS 373

Query: 361 KGSGFVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAIS 420
           +G GFVA+S+P+EA RAL+E+NGKM GRKPLY+A+AQ KE+R+A LQA F+Q RA G +S
Sbjct: 374 RGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRAPGPMS 433

Query: 421 SLPSGIPGFH--PGAPRLA-PQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGP-NF 480
                  GFH  PG P    PQ +Y GQ    +VPSQP GYGFQPQ M GMRPG GP NF
Sbjct: 434 -------GFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGPGNF 493

Query: 481 IMPYQFQRQGQPGPHPGMRRGG-NSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPP 540
           I+PY  QRQ Q GP  G RRG  N Q   +QQQ + R    G  YMN   NG     +  
Sbjct: 494 IVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNG--MDS 553

Query: 541 VLPQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYP 600
            +PQ ++ P++PL  D S +S      Q++ ++P S L S+LASASP ++  MLGEQLYP
Sbjct: 554 SVPQGILPPIIPLPIDASSISH-----QKAPLLPISKLTSSLASASPADRTRMLGEQLYP 613

Query: 601 LVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL 637
           LVE  EP H AKVTGMLLEMDQ E+LHL+ESP+ LKSKV+EA++VL
Sbjct: 614 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVL 643

[Close]

BLAST of Carg15816 vs. ExPASy Swiss-Prot
Match: Q05196 (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=3)

HSP 1 Score: 657.5 bits (1695), Expect = 1.6e-187
Identity = 377/662 (56.95%), Postives = 472/662 (71.30%), Query Frame = 0


Query: 4   PVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSI 63
           P  A + VA V  AA    +++ T     +SSLYVGDLDP+V+E  LL+LF+QVA V ++
Sbjct: 33  PFPAVSQVAAV-AAAAAAAEALQT---HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL 92

Query: 64  RVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHAN 123
           RVCRD T R SLGYAYVNF+N ++AS A+E LN++PI  +PIRIM+SNRDPS R SG  N
Sbjct: 93  RVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGN 152

Query: 124 VFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLN 183
           VFIKNLDASIDNKAL++TF++FG ILSCKVA+D  G+SKGYGFVQFE E +A  AI +LN
Sbjct: 153 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 212

Query: 184 GMLLNDKQVFVGHFIRRQERIQANGS---TFTNVYVKNLLETTTADDLKNLFATHGAITS 243
           GMLLNDKQVFVGHF+RRQ+R ++      +FTNVYVKNL +  T D+LK  F  +G I+S
Sbjct: 213 GMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISS 272

Query: 244 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 303
           AVVM D  G S+ FGFVNF SP++AA AVE +NG  LG E VLYV RAQKK +RE EL+ 
Sbjct: 273 AVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLG-EDVLYVGRAQKKSDREEELRR 332

Query: 304 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 363
           KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++  GLS+G GF
Sbjct: 333 KFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGF 392

Query: 364 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 423
           VA+S+P+EA  A+ E+NGKM GRKPLYVA+AQ KEER+A LQ+ F Q R+ G +S +PS 
Sbjct: 393 VAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSP 452

Query: 424 IPGFH---PGAPRLAPQQ-LYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG-PNFIMPY 483
           + GFH   PG P   P   ++ G    GLVPSQP GYG+Q Q M GMRPG G PNF+MP+
Sbjct: 453 MSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPF 512

Query: 484 QFQRQGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGF-SYMNNVRNGLKPPVLPPVLPQ 543
             QRQ QPGP  G RRG N+     QQQ +L+     F     N RNG++        PQ
Sbjct: 513 PLQRQTQPGPRVGFRRGANNMQQQFQQQQMLQQNASRFMGGAGNRRNGMEASA-----PQ 572

Query: 544 AVVGPVMPLTFDTSGVS-SSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVE 603
            ++    PL  + S  S ++P    +   +  S LAS LA ASP+    MLG+ LYPLVE
Sbjct: 573 GII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVE 632

Query: 604 CLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALA 656
             EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VL +++    +S      A
Sbjct: 633 QQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFA 679

[Close]

BLAST of Carg15816 vs. ExPASy Swiss-Prot
Match: P42731 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 4.4e-174
Identity = 355/649 (54.70%), Postives = 446/649 (68.72%), Query Frame = 0


Query: 12  ATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSIRVCRDQTG 71
           +T    + P T   AT   F ++SLYVGDLD  V + QL + F Q+  VV++RVCRD   
Sbjct: 14  STAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVT 73

Query: 72  RQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHANVFIKNLDA 131
           R+SLGY YVNF+N Q+A+ A++ LN+ P+ GKPIR+M S+RDPS+R+SG  N+FIKNLD 
Sbjct: 74  RRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDE 133

Query: 132 SIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLNGMLLNDKQ 191
           SID+KALHDTF++FG I+SCKVA+DS+GQSKGYGFVQ+ NE SA  AI +LNGMLLNDKQ
Sbjct: 134 SIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQ 193

Query: 192 VFVGHFIRRQER-IQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITSAVVMTDSKGK 251
           V+VG F+RRQER   AN + FTNVYVKNL E+TT DDLKN F  +G ITSAVVM D +GK
Sbjct: 194 VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK 253

Query: 252 SKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKAKFEQERKSRF 311
           SK FGFVNF++ D AA AVE LNG    D+K  YV RAQKK ERE EL+ ++EQ  K   
Sbjct: 254 SKGFGFVNFENADDAARAVESLNGHKF-DDKEWYVGRAQKKSERETELRVRYEQNLKEAA 313

Query: 312 EKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGFVAFSSPDEAT 371
           +K Q +NLY+KNLD  I DEKLKE+FS +GT+TS KVM D NG SKGSGFVAF++P+EAT
Sbjct: 314 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 373

Query: 372 RALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSGIPGFHPGAPR 431
            A+++L+GKM   KPLYVA+AQ KE+R+ RLQAQF+Q R      S+   +P + PG P 
Sbjct: 374 EAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPG 433

Query: 432 LAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG--PNFIMPYQFQRQGQPGPHPG 491
           +  QQ++YGQ  P ++P QP GYG+Q QL+ GMRPG G  P+F MP    +Q +PG   G
Sbjct: 434 IG-QQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPG--GG 493

Query: 492 MRRGG--NSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPVMPLTFD 551
            R GG  +SQ  N   Q  +   G+ F Y    R G         +P   +G  MPLT  
Sbjct: 494 RRPGGIQHSQQQNPMMQQQMHPRGRMFRYPQG-RGGSGD------VPPYDMGNNMPLTI- 553

Query: 552 TSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHAAKVTGM 611
                                LAS L++A+PE QR MLGE LYPLVE +E   AAKVTGM
Sbjct: 554 -------------------GALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGM 613

Query: 612 LLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALA 656
           LLEMDQ EVLHL+ESP+ LK+KVAEAM+VL   ++    ++QL +L L+
Sbjct: 614 LLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAA-GGATEQLASLNLS 629

[Close]

BLAST of Carg15816 vs. ExPASy Swiss-Prot
Match: Q9FXA2 (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 4.4e-166
Identity = 348/665 (52.33%), Postives = 445/665 (66.92%), Query Frame = 0


Query: 5   VTAPAAVATVQTAAIPPTDSVATGGGFL-SSSLYVGDLDPTVDEGQLLELFSQVAQVVSI 64
           V  P A A    AA     + A G     ++SLYVGDLD TV + QL E F+Q  QVVS+
Sbjct: 15  VAVPGAAAAEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSV 74

Query: 65  RVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHAN 124
           RVCRD T R+SLGY YVN++  Q+AS AL  LNF  +NG+ IR+M S RDPS+RKSG  N
Sbjct: 75  RVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGN 134

Query: 125 VFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLN 184
           +FIKNLD SID+KALH+TF+ FGPILSCKVA+D +GQSKGYGFVQ++ + +A  AI +LN
Sbjct: 135 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN 194

Query: 185 GMLLNDKQVFVGHFIRRQERIQANGST-FTNVYVKNLLETTTADDLKNLFATHGAITSAV 244
           GMLLNDKQV+VG F+ + +R  +     FTNVYVKNL E+ + ++L  +F   G  TS V
Sbjct: 195 GMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCV 254

Query: 245 VMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKAKF 304
           +M D +GKSK FGFVNF++ D AA AV+ LNG    D+K  +V +AQKK ERE ELK KF
Sbjct: 255 IMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTF-DDKEWFVGKAQKKSERETELKQKF 314

Query: 305 EQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGFVA 364
           EQ  K   +K QG+NLY+KNLD+ + D+KL+E F+ +GTITSCKVM D +G+S+GSGFVA
Sbjct: 315 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVA 374

Query: 365 FSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSGIP 424
           FS+P+EATRA+ E+NGKM   KPLYVA+AQ KE+RKARLQAQF+Q R      ++   + 
Sbjct: 375 FSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQ 434

Query: 425 GFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG--PNFIMP-----Y 484
            + PG P +  QQL+YGQG P ++P QP G+G+Q QL+ GMRPG    PNF MP      
Sbjct: 435 MYPPGGPPMG-QQLFYGQGPPAMIP-QP-GFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQ 494

Query: 485 QFQRQGQPGPHP-GMRRGGNSQPF--NKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVL 544
           Q Q+Q Q    P G RRG   QP   +   Q  +   G+ + Y     N +  P      
Sbjct: 495 QQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRMYRYPQRDVNTMPGP------ 554

Query: 545 PQAVVGPVMPLTFD-TSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPL 604
                  ++ + +D +SG      D   S+ VP   LA+ LA+A+PE QR MLGE LYPL
Sbjct: 555 ----TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPL 614

Query: 605 VECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPE--LSDQL 655
           VE LEP  AAKVTGMLLEMDQ EVLHL+ESP+ LK+KV EAM+VL   + +     +DQL
Sbjct: 615 VEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRSVAQQQAGGAADQL 665

[Close]

BLAST of Carg15816 vs. ExPASy Swiss-Prot
Match: O22173 (Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 7.8e-163
Identity = 336/648 (51.85%), Postives = 428/648 (66.05%), Query Frame = 0


Query: 8   PAAVATVQTAAIPPTDSVATGGG------FLSSSLYVGDLDPTVDEGQLLELFSQVAQVV 67
           P AV     A    T  +  GGG          SLYVGDLD  V + QL + F++V QVV
Sbjct: 14  PPAVVNDGAATASATPGIGVGGGGDGVTHGALCSLYVGDLDFNVTDSQLYDYFTEVCQVV 73

Query: 68  SIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGH 127
           S+RVCRD     SLGY YVN+SN  +A  A++ LN+S +NGK IRI  S+RD S R+SG 
Sbjct: 74  SVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGV 133

Query: 128 ANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVR 187
            N+F+KNLD S+DNK LH+ F+  G I+SCKVA D  GQS+GYGFVQF+ E SA  AI +
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEK 193

Query: 188 LNGMLLNDKQVFVGHFIRRQER-IQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 247
           LNG +LNDKQ+FVG F+R++ER   A+   FTNVYVKNL E TT D+LK  F  +G+I+S
Sbjct: 194 LNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISS 253

Query: 248 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 307
           AVVM D  GKS+CFGFVNF++P+ AA AVE LNG    D+K  YV +AQKK ERE EL  
Sbjct: 254 AVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKF-DDKEWYVGKAQKKSERELELSR 313

Query: 308 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 367
           ++EQ       K  G NLY+KNLDD + DEKL+ELF+E+GTITSCKVM D +G SKGSGF
Sbjct: 314 RYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGF 373

Query: 368 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 427
           VAFS+  EA+R LNE+NGKM G KPLYVA+AQ KEER+A+LQAQF+Q R A  I  +   
Sbjct: 374 VAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPA-FIPGVGPR 433

Query: 428 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGM--GPNFIMPYQFQ 487
           +P F  GAP L  QQ++YGQG P ++P QP G+G+QPQL+ GMRP    GP         
Sbjct: 434 MPIFTGGAPGLG-QQIFYGQGPPPIIPHQP-GFGYQPQLVPGMRPAFFGGP-------MM 493

Query: 488 RQGQPGPHPGMRRGGNSQPFNKQQQSL------LRGTGQGFSYMNNVRNGLKPPVLPPVL 547
           + GQ GP PG RR G+    ++ QQ +      +   G+G+ Y +  RN    P+   ++
Sbjct: 494 QPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPSGGRNMPDGPMPGGMV 553

Query: 548 PQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLV 607
           P A    VMP                 S+ + +  LA++LA+A+P  QR +LGE LYPLV
Sbjct: 554 PVAYDMNVMPY----------------SQPMSAGQLATSLANATPAQQRTLLGESLYPLV 613

Query: 608 ECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKAS 641
           + +E  HAAKVTGMLLEMDQ EVLHL+ESP+ L +KV+EA++VL   +
Sbjct: 614 DQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVN 634

[Close]

BLAST of Carg15816 vs. ExPASy TrEMBL
Match: A0A6J1H757 (Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461096 PE=3 SV=1)

HSP 1 Score: 1256.9 bits (3251), Expect = 0.0e+00
Identity = 651/656 (99.24%), Postives = 654/656 (99.70%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV
Sbjct: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQTGRQSLGYAYVNFSNHQEASSAL+HLNFSPINGKPIRIMMSNRDPSIRKSG
Sbjct: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALKHLNFSPINGKPIRIMMSNRDPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
           HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV
Sbjct: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS
Sbjct: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           AVVMTD KGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA
Sbjct: 241 AVVMTDLKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPL+VAVAQHKEERKARLQAQFAQARAAGAISSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLFVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFI+PYQFQRQ
Sbjct: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFILPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540
           GQPGP PGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV
Sbjct: 481 GQPGPRPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540

Query: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600
           MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA
Sbjct: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600

Query: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK
Sbjct: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 656

[Close]

BLAST of Carg15816 vs. ExPASy TrEMBL
Match: A0A6J1JI74 (Polyadenylate-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111487196 PE=3 SV=1)

HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 626/656 (95.43%), Postives = 638/656 (97.26%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQV 60
           M TPVTAPA VATVQTAAIPPTDSVATGGGFL+SSLYVGDLDPTV+EGQLLELFSQVAQV
Sbjct: 1   MKTPVTAPATVATVQTAAIPPTDSVATGGGFLNSSLYVGDLDPTVNEGQLLELFSQVAQV 60

Query: 61  VSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSG 120
           VSIRVCRDQT R+SLGYAYVNFSNHQEASSALEHLNF+ INGKPIRIMMSNR+PSIRKSG
Sbjct: 61  VSIRVCRDQTRRRSLGYAYVNFSNHQEASSALEHLNFTLINGKPIRIMMSNRNPSIRKSG 120

Query: 121 HANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIV 180
            ANVFIKNLDASIDNKAL+DTFATFG ILSCKVAIDSNGQSKGYGFVQFENE +ANIAIV
Sbjct: 121 QANVFIKNLDASIDNKALYDTFATFGTILSCKVAIDSNGQSKGYGFVQFENEEAANIAIV 180

Query: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITS 240
           RLNGMLLNDKQVFVGHFIRRQERIQANGST TNVYVKNLLETTTADDLKNLFATHGAITS
Sbjct: 181 RLNGMLLNDKQVFVGHFIRRQERIQANGSTVTNVYVKNLLETTTADDLKNLFATHGAITS 240

Query: 241 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 300
           A VMTDS  KSKCFGFVNFQSPDSAAAAVE LNGT+LGD+KVLYVARAQKK EREAELKA
Sbjct: 241 AAVMTDSNRKSKCFGFVNFQSPDSAAAAVETLNGTVLGDDKVLYVARAQKKAEREAELKA 300

Query: 301 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360
           KF QERKSRFEKLQGANLYIKNLDD IDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF
Sbjct: 301 KFVQERKSRFEKLQGANLYIKNLDDQIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 360

Query: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420
           VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG
Sbjct: 361 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 420

Query: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480
           IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ
Sbjct: 421 IPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQRQ 480

Query: 481 GQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPV 540
           GQPGP PGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQA+VGPV
Sbjct: 481 GQPGPRPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQALVGPV 540

Query: 541 MPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHA 600
           MPLTFDTSGVSSSPID+QRSRVVPSSTLASALASASPENQR+MLGEQLYPLVECLEPGHA
Sbjct: 541 MPLTFDTSGVSSSPIDIQRSRVVPSSTLASALASASPENQRMMLGEQLYPLVECLEPGHA 600

Query: 601 AKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AKVTGMLLEMDQPEVLHLIESPDDL SKVAEAMEVLHKAS EPELSDQLGALALAK
Sbjct: 601 AKVTGMLLEMDQPEVLHLIESPDDLNSKVAEAMEVLHKASFEPELSDQLGALALAK 656

[Close]

BLAST of Carg15816 vs. ExPASy TrEMBL
Match: A0A1S3C568 (Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496577 PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 2.7e-307
Identity = 555/657 (84.47%), Postives = 595/657 (90.56%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAI-PPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQ 60
           MA  V APA  ATVQTA I PPT +VATGGGFLSSSLYVGDLD +V+EGQLLELF QVAQ
Sbjct: 1   MAATVPAPATAATVQTAVIPPPTGAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60

Query: 61  VVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKS 120
           VVSIRVCRDQT RQSLGYAYVNFS+HQ+A +A+EHLNF+P+NGKPIRIM+SNRDPSIRKS
Sbjct: 61  VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120

Query: 121 GHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAI 180
           G+ANVFIKNLD SIDNKAL DTFA FGP+LSCKVA+DSNGQSKGYGFVQFE+E SA I+I
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGPVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180

Query: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAIT 240
            +LNGMLLNDKQV+VGHFIR QERI+ANGS FTNVYVKNL ETTT DDLKNLFA HG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAAHGTIT 240

Query: 241 SAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELK 300
           SA+VMTDS GKSKCFGFVNFQ+ DSAAAAVE LNGT+LGD+K+LYV RAQ+K EREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLNGTVLGDDKILYVGRAQRKAEREAELK 300

Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
           AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQ+GLSKGSG
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSG 360

Query: 361 FVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
           FVAFSSPDEAT+ALNE+NGKMKGRKPLYVAVAQ KEERKARLQAQFAQ RA G ISSLPS
Sbjct: 361 FVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRATGGISSLPS 420

Query: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQR 480
           GIPGFHPGA R++PQQ+YYGQGNPGL P QPAGYGFQPQLM+GMRPGMGPNF+MPYQFQR
Sbjct: 421 GIPGFHPGA-RVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480

Query: 481 QGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGP 540
           QGQPGP  GMRRGGNSQP   QQQ  LRG GQGF YMNN RNGL+     PVLPQ +V P
Sbjct: 481 QGQPGPRSGMRRGGNSQPL-PQQQLPLRGFGQGFRYMNNARNGLE----SPVLPQGLVSP 540

Query: 541 VMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGH 600
           +MPL FD SGVSS P D+QR+R VP+STLASALASA+PENQRVMLGEQLYPLVE LEP H
Sbjct: 541 MMPLAFDGSGVSSPPNDIQRTRAVPTSTLASALASATPENQRVMLGEQLYPLVERLEPSH 600

Query: 601 AAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AAKVTGMLLEMDQPEVLHLIESP+DLKSKVAEAMEVL KASSEPELSDQLGALAL K
Sbjct: 601 AAKVTGMLLEMDQPEVLHLIESPEDLKSKVAEAMEVLRKASSEPELSDQLGALALTK 651

[Close]

BLAST of Carg15816 vs. ExPASy TrEMBL
Match: A0A6J1BXU1 (Polyadenylate-binding protein OS=Momordica charantia OX=3673 GN=LOC111006278 PE=3 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 7.3e-297
Identity = 538/658 (81.76%), Postives = 593/658 (90.12%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAI-PPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQ 60
           MA  V A    A VQ AAI PP  S ATG GFLSSSLYVGDLD +V+EGQLLE+F QVAQ
Sbjct: 1   MAAAVQASVTAAQVQPAAIPPPVGSAATGAGFLSSSLYVGDLDQSVNEGQLLEVFGQVAQ 60

Query: 61  VVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKS 120
           VVSIRVCRDQT RQSLGYAYVNFSNHQ+AS+A+E LNF+P+NGKPIRIM+SNRDPSIRKS
Sbjct: 61  VVSIRVCRDQTRRQSLGYAYVNFSNHQDASNAMELLNFTPVNGKPIRIMISNRDPSIRKS 120

Query: 121 GHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAI 180
           GHANVFIKNLD SIDNKALHDTFA FG +LSCKVA+DSNGQSKGYGFVQFE+E +A  AI
Sbjct: 121 GHANVFIKNLDISIDNKALHDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEEAAESAI 180

Query: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAIT 240
           +RLNGML+NDKQV+VGHFIR QERI+ANGS FTNVYVKNL ETTT DDLK++FA HG+IT
Sbjct: 181 IRLNGMLINDKQVYVGHFIRHQERIRANGSMFTNVYVKNLPETTTDDDLKDIFAAHGSIT 240

Query: 241 SAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELK 300
           SAVVM DS GKS+CFGFVNFQ+ D+AA AVE LNGTILGD+KVLYV RAQ+K EREAELK
Sbjct: 241 SAVVMRDSNGKSRCFGFVNFQTSDAAAVAVEKLNGTILGDDKVLYVGRAQRKSEREAELK 300

Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
           AK+EQER SRFEKLQGANLYIKN+DDH+DDEKLKELFSE+GTITSCKVMLDQ+GLSKGSG
Sbjct: 301 AKYEQERLSRFEKLQGANLYIKNIDDHVDDEKLKELFSEFGTITSCKVMLDQHGLSKGSG 360

Query: 361 FVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
           FVAFSS +EAT+ALNE+NGKM GRKPLYVAVAQ KEERKARLQAQFAQ RAAG +SSLPS
Sbjct: 361 FVAFSSSEEATKALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGMSSLPS 420

Query: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQR 480
           GIPGFHPGAPRLAPQQ+YYGQGN GLVP QPAGYGFQPQLMTGMRPGM PN+++PYQFQR
Sbjct: 421 GIPGFHPGAPRLAPQQMYYGQGN-GLVPPQPAGYGFQPQLMTGMRPGMAPNYMVPYQFQR 480

Query: 481 QGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVG- 540
           QGQPG  PGMRRGGNSQP  +QQQ +LRG+GQGF YMNN RNGL+     PVLPQ +VG 
Sbjct: 481 QGQPGRGPGMRRGGNSQPV-QQQQMVLRGSGQGFRYMNNARNGLE----SPVLPQGLVGP 540

Query: 541 PVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPG 600
           P+MPL F++SGV+SSPID+QRSR VP+STLASALASA+PENQRVMLGEQLYPLV+ LEPG
Sbjct: 541 PMMPLAFESSGVTSSPIDIQRSRTVPTSTLASALASATPENQRVMLGEQLYPLVDRLEPG 600

Query: 601 HAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           HAAKVTGMLLEMDQPEVLHLIESPDDLK+KVAEAMEVL KA+SEPEL+DQL +LAL K
Sbjct: 601 HAAKVTGMLLEMDQPEVLHLIESPDDLKNKVAEAMEVLRKATSEPELTDQLTSLALNK 652

[Close]

BLAST of Carg15816 vs. ExPASy TrEMBL
Match: A0A0A0KEB0 (Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_6G052760 PE=3 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 2.0e-286
Identity = 529/657 (80.52%), Postives = 565/657 (86.00%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQTAAI-PPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQ 60
           MA  V APA  ATVQTA I PPT +VATGGGFLSSSLYVGDLD +V+EGQLLELF QVAQ
Sbjct: 1   MAATVPAPATAATVQTAVIPPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQ 60

Query: 61  VVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKS 120
           VVSIRVCRDQT RQSLGYAYVNFS+HQ+A +A+EHLNF+P+NGKPIRIM+SNRDPSIRKS
Sbjct: 61  VVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKS 120

Query: 121 GHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAI 180
           G+ANVFIKNLD SIDNKAL DTFA FG +LSCKVA+DSNGQSKGYGFVQFE+E SA I+I
Sbjct: 121 GYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISI 180

Query: 181 VRLNGMLLNDKQVFVGHFIRRQERIQANGSTFTNVYVKNLLETTTADDLKNLFATHGAIT 240
            +LNGMLLNDKQV+VGHFIR QERI+ANGS FTNVYVKNL ETTT DDLKNLFA HG IT
Sbjct: 181 EKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTIT 240

Query: 241 SAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELK 300
           SA+VMTDS GKSKCFGFVNFQ+ DSAAAAVE L+GT+LGD+K LYV RAQ+K EREAELK
Sbjct: 241 SAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELK 300

Query: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSG 360
           AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCK             
Sbjct: 301 AKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCK------------- 360

Query: 361 FVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPS 420
                        LNE+NGKMKGRKPLYVAVAQ KEERKARLQAQFAQ RAAG ISSLPS
Sbjct: 361 -------------LNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPS 420

Query: 421 GIPGFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGPNFIMPYQFQR 480
           GIPGFHPGA R++PQQ+YYGQGNPGL P QPAGYGFQPQLM+GMRPGMGPNF+MPYQFQR
Sbjct: 421 GIPGFHPGAARVSPQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQR 480

Query: 481 QGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGP 540
           QGQPGP  G+RRGGNSQP   QQQ  LRG GQ F YMNN RNGL+     PVLPQ +V P
Sbjct: 481 QGQPGPRLGVRRGGNSQPL-PQQQLPLRGYGQSFRYMNNARNGLE----TPVLPQGLVSP 540

Query: 541 VMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGH 600
           +MPL FD SGVSS P D+QRSR VP+STLASALASAS ENQRVMLGEQLYPLVE LEP H
Sbjct: 541 MMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQRVMLGEQLYPLVERLEPSH 600

Query: 601 AAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALAK 657
           AAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL KASSEPELSDQLGAL L K
Sbjct: 601 AAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLRKASSEPELSDQLGALTLTK 626

[Close]

BLAST of Carg15816 vs. TAIR 10
Match: AT1G22760.1 (poly(A) binding protein 3 )

HSP 1 Score: 675.2 bits (1741), Expect = 5.1e-194
Identity = 382/646 (59.13%), Postives = 464/646 (71.83%), Query Frame = 0


Query: 1   MATPVTAPAAVATVQT-AAIP-PTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVA 60
           M   V +P A  +VQ   +IP P+  V       +SSLY GDLDP V E  L +LF  VA
Sbjct: 14  MVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVA 73

Query: 61  QVVSIRVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRK 120
            VVS+RVCRDQ  R+SLGYAY+NFSN  +A  A+E LN++P+  +PIRIM+SNRDPS R 
Sbjct: 74  NVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRL 133

Query: 121 SGHANVFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIA 180
           SG  N+FIKNLDASIDNKAL +TF++FG ILSCKVA+D  G+SKGYGFVQFE E SA  A
Sbjct: 134 SGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAA 193

Query: 181 IVRLNGMLLNDKQVFVGHFIRRQERIQANGS---TFTNVYVKNLLETTTADDLKNLFATH 240
           I +LNGML+NDKQVFVGHFIRRQER +   +    FTNVYVKNL +    D+L+  F   
Sbjct: 194 IDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKF 253

Query: 241 GAITSAVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVERE 300
           G I+SAVVM D  G S+CFGFVNF+  ++AA+AVE +NG  LGD+ VLYV RAQKK ERE
Sbjct: 254 GVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDD-VLYVGRAQKKSERE 313

Query: 301 AELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLS 360
            EL+ KFEQER +RFEK QGANLY+KNLDD +DDEKLKE+FSEYG +TS KVML+  G+S
Sbjct: 314 EELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMS 373

Query: 361 KGSGFVAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAIS 420
           +G GFVA+S+P+EA RAL+E+NGKM GRKPLY+A+AQ KE+R+A LQA F+Q RA G +S
Sbjct: 374 RGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRAPGPMS 433

Query: 421 SLPSGIPGFH--PGAPRLA-PQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMGP-NF 480
                  GFH  PG P    PQ +Y GQ    +VPSQP GYGFQPQ M GMRPG GP NF
Sbjct: 434 -------GFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGPGNF 493

Query: 481 IMPYQFQRQGQPGPHPGMRRGG-NSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPP 540
           I+PY  QRQ Q GP  G RRG  N Q   +QQQ + R    G  YMN   NG     +  
Sbjct: 494 IVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNG--MDS 553

Query: 541 VLPQAVVGPVMPLTFDTSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYP 600
            +PQ ++ P++PL  D S +S      Q++ ++P S L S+LASASP ++  MLGEQLYP
Sbjct: 554 SVPQGILPPIIPLPIDASSISH-----QKAPLLPISKLTSSLASASPADRTRMLGEQLYP 613

Query: 601 LVECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVL 637
           LVE  EP H AKVTGMLLEMDQ E+LHL+ESP+ LKSKV+EA++VL
Sbjct: 614 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVL 643

[Close]

BLAST of Carg15816 vs. TAIR 10
Match: AT1G71770.1 (poly(A)-binding protein 5 )

HSP 1 Score: 657.5 bits (1695), Expect = 1.1e-188
Identity = 377/662 (56.95%), Postives = 472/662 (71.30%), Query Frame = 0


Query: 4   PVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSI 63
           P  A + VA V  AA    +++ T     +SSLYVGDLDP+V+E  LL+LF+QVA V ++
Sbjct: 33  PFPAVSQVAAV-AAAAAAAEALQT---HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL 92

Query: 64  RVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHAN 123
           RVCRD T R SLGYAYVNF+N ++AS A+E LN++PI  +PIRIM+SNRDPS R SG  N
Sbjct: 93  RVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGN 152

Query: 124 VFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLN 183
           VFIKNLDASIDNKAL++TF++FG ILSCKVA+D  G+SKGYGFVQFE E +A  AI +LN
Sbjct: 153 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 212

Query: 184 GMLLNDKQVFVGHFIRRQERIQANGS---TFTNVYVKNLLETTTADDLKNLFATHGAITS 243
           GMLLNDKQVFVGHF+RRQ+R ++      +FTNVYVKNL +  T D+LK  F  +G I+S
Sbjct: 213 GMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISS 272

Query: 244 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 303
           AVVM D  G S+ FGFVNF SP++AA AVE +NG  LG E VLYV RAQKK +RE EL+ 
Sbjct: 273 AVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLG-EDVLYVGRAQKKSDREEELRR 332

Query: 304 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 363
           KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++  GLS+G GF
Sbjct: 333 KFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGF 392

Query: 364 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 423
           VA+S+P+EA  A+ E+NGKM GRKPLYVA+AQ KEER+A LQ+ F Q R+ G +S +PS 
Sbjct: 393 VAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSP 452

Query: 424 IPGFH---PGAPRLAPQQ-LYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG-PNFIMPY 483
           + GFH   PG P   P   ++ G    GLVPSQP GYG+Q Q M GMRPG G PNF+MP+
Sbjct: 453 MSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPF 512

Query: 484 QFQRQGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGF-SYMNNVRNGLKPPVLPPVLPQ 543
             QRQ QPGP  G RRG N+     QQQ +L+     F     N RNG++        PQ
Sbjct: 513 PLQRQTQPGPRVGFRRGANNMQQQFQQQQMLQQNASRFMGGAGNRRNGMEASA-----PQ 572

Query: 544 AVVGPVMPLTFDTSGVS-SSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVE 603
            ++    PL  + S  S ++P    +   +  S LAS LA ASP+    MLG+ LYPLVE
Sbjct: 573 GII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVE 632

Query: 604 CLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALA 656
             EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VL +++    +S      A
Sbjct: 633 QQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFA 679

[Close]

BLAST of Carg15816 vs. TAIR 10
Match: AT1G71770.2 (poly(A)-binding protein 5 )

HSP 1 Score: 657.5 bits (1695), Expect = 1.1e-188
Identity = 377/662 (56.95%), Postives = 472/662 (71.30%), Query Frame = 0


Query: 4   PVTAPAAVATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSI 63
           P  A + VA V  AA    +++ T     +SSLYVGDLDP+V+E  LL+LF+QVA V ++
Sbjct: 33  PFPAVSQVAAV-AAAAAAAEALQT---HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL 92

Query: 64  RVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHAN 123
           RVCRD T R SLGYAYVNF+N ++AS A+E LN++PI  +PIRIM+SNRDPS R SG  N
Sbjct: 93  RVCRDLTHR-SLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGN 152

Query: 124 VFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLN 183
           VFIKNLDASIDNKAL++TF++FG ILSCKVA+D  G+SKGYGFVQFE E +A  AI +LN
Sbjct: 153 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 212

Query: 184 GMLLNDKQVFVGHFIRRQERIQANGS---TFTNVYVKNLLETTTADDLKNLFATHGAITS 243
           GMLLNDKQVFVGHF+RRQ+R ++      +FTNVYVKNL +  T D+LK  F  +G I+S
Sbjct: 213 GMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISS 272

Query: 244 AVVMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKA 303
           AVVM D  G S+ FGFVNF SP++AA AVE +NG  LG E VLYV RAQKK +RE EL+ 
Sbjct: 273 AVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLG-EDVLYVGRAQKKSDREEELRR 332

Query: 304 KFEQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGF 363
           KFEQER SRFEKLQG+NLY+KNLDD ++DEKLKE+FSEYG +TSCKVM++  GLS+G GF
Sbjct: 333 KFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGF 392

Query: 364 VAFSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSG 423
           VA+S+P+EA  A+ E+NGKM GRKPLYVA+AQ KEER+A LQ+ F Q R+ G +S +PS 
Sbjct: 393 VAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSP 452

Query: 424 IPGFH---PGAPRLAPQQ-LYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG-PNFIMPY 483
           + GFH   PG P   P   ++ G    GLVPSQP GYG+Q Q M GMRPG G PNF+MP+
Sbjct: 453 MSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPF 512

Query: 484 QFQRQGQPGPHPGMRRGGNSQPFNKQQQSLLRGTGQGF-SYMNNVRNGLKPPVLPPVLPQ 543
             QRQ QPGP  G RRG N+     QQQ +L+     F     N RNG++        PQ
Sbjct: 513 PLQRQTQPGPRVGFRRGANNMQQQFQQQQMLQQNASRFMGGAGNRRNGMEASA-----PQ 572

Query: 544 AVVGPVMPLTFDTSGVS-SSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVE 603
            ++    PL  + S  S ++P    +   +  S LAS LA ASP+    MLG+ LYPLVE
Sbjct: 573 GII----PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVE 632

Query: 604 CLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALA 656
             EP +AAKVTGMLLEMDQ E+LHL+ESP+ LK+KV+EA++VL +++    +S      A
Sbjct: 633 QQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFA 679

[Close]

BLAST of Carg15816 vs. TAIR 10
Match: AT4G34110.1 (poly(A) binding protein 2 )

HSP 1 Score: 612.8 bits (1579), Expect = 3.1e-175
Identity = 355/649 (54.70%), Postives = 446/649 (68.72%), Query Frame = 0


Query: 12  ATVQTAAIPPTDSVATGGGFLSSSLYVGDLDPTVDEGQLLELFSQVAQVVSIRVCRDQTG 71
           +T    + P T   AT   F ++SLYVGDLD  V + QL + F Q+  VV++RVCRD   
Sbjct: 14  STAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVT 73

Query: 72  RQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHANVFIKNLDA 131
           R+SLGY YVNF+N Q+A+ A++ LN+ P+ GKPIR+M S+RDPS+R+SG  N+FIKNLD 
Sbjct: 74  RRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDE 133

Query: 132 SIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLNGMLLNDKQ 191
           SID+KALHDTF++FG I+SCKVA+DS+GQSKGYGFVQ+ NE SA  AI +LNGMLLNDKQ
Sbjct: 134 SIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQ 193

Query: 192 VFVGHFIRRQER-IQANGSTFTNVYVKNLLETTTADDLKNLFATHGAITSAVVMTDSKGK 251
           V+VG F+RRQER   AN + FTNVYVKNL E+TT DDLKN F  +G ITSAVVM D +GK
Sbjct: 194 VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK 253

Query: 252 SKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKAKFEQERKSRF 311
           SK FGFVNF++ D AA AVE LNG    D+K  YV RAQKK ERE EL+ ++EQ  K   
Sbjct: 254 SKGFGFVNFENADDAARAVESLNGHKF-DDKEWYVGRAQKKSERETELRVRYEQNLKEAA 313

Query: 312 EKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGFVAFSSPDEAT 371
           +K Q +NLY+KNLD  I DEKLKE+FS +GT+TS KVM D NG SKGSGFVAF++P+EAT
Sbjct: 314 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 373

Query: 372 RALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSGIPGFHPGAPR 431
            A+++L+GKM   KPLYVA+AQ KE+R+ RLQAQF+Q R      S+   +P + PG P 
Sbjct: 374 EAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPG 433

Query: 432 LAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG--PNFIMPYQFQRQGQPGPHPG 491
           +  QQ++YGQ  P ++P QP GYG+Q QL+ GMRPG G  P+F MP    +Q +PG   G
Sbjct: 434 IG-QQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPG--GG 493

Query: 492 MRRGG--NSQPFNKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVLPQAVVGPVMPLTFD 551
            R GG  +SQ  N   Q  +   G+ F Y    R G         +P   +G  MPLT  
Sbjct: 494 RRPGGIQHSQQQNPMMQQQMHPRGRMFRYPQG-RGGSGD------VPPYDMGNNMPLTI- 553

Query: 552 TSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPLVECLEPGHAAKVTGM 611
                                LAS L++A+PE QR MLGE LYPLVE +E   AAKVTGM
Sbjct: 554 -------------------GALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGM 613

Query: 612 LLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPELSDQLGALALA 656
           LLEMDQ EVLHL+ESP+ LK+KVAEAM+VL   ++    ++QL +L L+
Sbjct: 614 LLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAA-GGATEQLASLNLS 629

[Close]

BLAST of Carg15816 vs. TAIR 10
Match: AT1G49760.1 (poly(A) binding protein 8 )

HSP 1 Score: 586.3 bits (1510), Expect = 3.1e-167
Identity = 348/665 (52.33%), Postives = 445/665 (66.92%), Query Frame = 0


Query: 5   VTAPAAVATVQTAAIPPTDSVATGGGFL-SSSLYVGDLDPTVDEGQLLELFSQVAQVVSI 64
           V  P A A    AA     + A G     ++SLYVGDLD TV + QL E F+Q  QVVS+
Sbjct: 15  VAVPGAAAAEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSV 74

Query: 65  RVCRDQTGRQSLGYAYVNFSNHQEASSALEHLNFSPINGKPIRIMMSNRDPSIRKSGHAN 124
           RVCRD T R+SLGY YVN++  Q+AS AL  LNF  +NG+ IR+M S RDPS+RKSG  N
Sbjct: 75  RVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGN 134

Query: 125 VFIKNLDASIDNKALHDTFATFGPILSCKVAIDSNGQSKGYGFVQFENEISANIAIVRLN 184
           +FIKNLD SID+KALH+TF+ FGPILSCKVA+D +GQSKGYGFVQ++ + +A  AI +LN
Sbjct: 135 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN 194

Query: 185 GMLLNDKQVFVGHFIRRQERIQANGST-FTNVYVKNLLETTTADDLKNLFATHGAITSAV 244
           GMLLNDKQV+VG F+ + +R  +     FTNVYVKNL E+ + ++L  +F   G  TS V
Sbjct: 195 GMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCV 254

Query: 245 VMTDSKGKSKCFGFVNFQSPDSAAAAVEMLNGTILGDEKVLYVARAQKKVEREAELKAKF 304
           +M D +GKSK FGFVNF++ D AA AV+ LNG    D+K  +V +AQKK ERE ELK KF
Sbjct: 255 IMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTF-DDKEWFVGKAQKKSERETELKQKF 314

Query: 305 EQERKSRFEKLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQNGLSKGSGFVA 364
           EQ  K   +K QG+NLY+KNLD+ + D+KL+E F+ +GTITSCKVM D +G+S+GSGFVA
Sbjct: 315 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVA 374

Query: 365 FSSPDEATRALNELNGKMKGRKPLYVAVAQHKEERKARLQAQFAQARAAGAISSLPSGIP 424
           FS+P+EATRA+ E+NGKM   KPLYVA+AQ KE+RKARLQAQF+Q R      ++   + 
Sbjct: 375 FSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQ 434

Query: 425 GFHPGAPRLAPQQLYYGQGNPGLVPSQPAGYGFQPQLMTGMRPGMG--PNFIMP-----Y 484
            + PG P +  QQL+YGQG P ++P QP G+G+Q QL+ GMRPG    PNF MP      
Sbjct: 435 MYPPGGPPMG-QQLFYGQGPPAMIP-QP-GFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQ 494

Query: 485 QFQRQGQPGPHP-GMRRGGNSQPF--NKQQQSLLRGTGQGFSYMNNVRNGLKPPVLPPVL 544
           Q Q+Q Q    P G RRG   QP   +   Q  +   G+ + Y     N +  P      
Sbjct: 495 QQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRMYRYPQRDVNTMPGP------ 554

Query: 545 PQAVVGPVMPLTFD-TSGVSSSPIDVQRSRVVPSSTLASALASASPENQRVMLGEQLYPL 604
                  ++ + +D +SG      D   S+ VP   LA+ LA+A+PE QR MLGE LYPL
Sbjct: 555 ----TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPL 614

Query: 605 VECLEPGHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLHKASSEPE--LSDQL 655
           VE LEP  AAKVTGMLLEMDQ EVLHL+ESP+ LK+KV EAM+VL   + +     +DQL
Sbjct: 615 VEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRSVAQQQAGGAADQL 665

The following BLAST results are available for this feature:

BLAST of Carg15816 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032892.1	0.0e+00	100.00	Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602210.1	0.0e+00	99.39	Polyadenylate-binding protein 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960347.1	0.0e+00	99.24	polyadenylate-binding protein 3 [Cucurbita moschata] >XP_022960354.1 polyadenyla...	[more]
XP_023551080.1	0.0e+00	96.66	polyadenylate-binding protein 3 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023551071.1	0.0e+00	96.52	polyadenylate-binding protein 3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64380	7.2e-193	59.13	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=...	[more]
Q05196	1.6e-187	56.95	Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=...	[more]
P42731	4.4e-174	54.70	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=...	[more]
Q9FXA2	4.4e-166	52.33	Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=...	[more]
O22173	7.8e-163	51.85	Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=...	[more]

BLAST of Carg15816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H757	0.0e+00	99.24	Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461096 PE=3...	[more]
A0A6J1JI74	0.0e+00	95.43	Polyadenylate-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111487196 PE=3 S...	[more]
A0A1S3C568	2.7e-307	84.47	Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496577 PE=3 SV=1	[more]
A0A6J1BXU1	7.3e-297	81.76	Polyadenylate-binding protein OS=Momordica charantia OX=3673 GN=LOC111006278 PE=...	[more]
A0A0A0KEB0	2.0e-286	80.52	Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_6G052760 PE=3 SV...	[more]

BLAST of Carg15816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22760.1	5.1e-194	59.13	poly(A) binding protein 3	[more]
AT1G71770.1	1.1e-188	56.95	poly(A)-binding protein 5	[more]
AT1G71770.2	1.1e-188	56.95	poly(A)-binding protein 5	[more]
AT4G34110.1	3.1e-175	54.70	poly(A) binding protein 2	[more]
AT1G49760.1	3.1e-167	52.33	poly(A) binding protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 285..305
None	No IPR available	COILS	Coil	Coil	coord: 391..411
None	No IPR available	GENE3D	1.10.1900.10		coord: 560..641 e-value: 8.2E-32 score: 111.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..504
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 34..644
None	No IPR available	PANTHER	PTHR24012:SF816	POLYADENYLATE-BINDING PROTEIN	coord: 34..644
None	No IPR available	CDD	cd12381	RRM4_I_PABPs	coord: 315..392 e-value: 2.24505E-45 score: 153.929
None	No IPR available	CDD	cd12380	RRM3_I_PABPs	coord: 211..291 e-value: 5.08983E-37 score: 130.772
None	No IPR available	CDD	cd12378	RRM1_I_PABPs	coord: 35..114 e-value: 9.56386E-40 score: 138.436
None	No IPR available	CDD	cd12379	RRM2_I_PABPs	coord: 120..196 e-value: 2.30847E-44 score: 151.165
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	SMART	SM00517	poly_2	coord: 576..639 e-value: 1.3E-35 score: 134.3
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	PFAM	PF00658	PABP	coord: 570..636 e-value: 7.7E-26 score: 90.0
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	PROSITE	PS51309	PABC	coord: 564..641 score: 20.56472
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 123..195 e-value: 13.0 score: 2.8 coord: 317..388 e-value: 0.13 score: 21.3 coord: 213..285 e-value: 2.9 score: 9.5 coord: 35..108 e-value: 9.5 score: 4.1
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 35..108 e-value: 7.5E-21 score: 85.3 coord: 213..286 e-value: 1.6E-23 score: 94.1 coord: 317..389 e-value: 6.6E-24 score: 95.4 coord: 123..195 e-value: 4.1E-22 score: 89.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 124..191 e-value: 2.5E-18 score: 65.7 coord: 318..386 e-value: 7.9E-20 score: 70.5 coord: 36..106 e-value: 2.2E-16 score: 59.5 coord: 214..282 e-value: 1.8E-19 score: 69.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 34..112 score: 17.165293
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 212..290 score: 17.591679
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 122..194 score: 16.807129
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 316..393 score: 18.73439
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 115..202 e-value: 4.8E-21 score: 76.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 300..406 e-value: 7.5E-27 score: 95.9 coord: 203..299 e-value: 2.5E-24 score: 87.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 32..114 e-value: 3.0E-22 score: 80.8
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4	TIGRFAM	TIGR01628	TIGR01628	coord: 34..636 e-value: 1.3E-220 score: 732.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 34..201
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 212..395
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 466..642

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15816-RA	Carg15816-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003730	mRNA 3'-UTR binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0008266	poly(U) RNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding