Carg15812 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15812
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nucleolar protein 16, putative
Location	Carg_Chr04: 19068932 .. 19069366 (+)
RNA-Seq Expression	Carg15812
Synteny	Carg15812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA

mRNA sequence

ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA

Coding sequence (CDS)

ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA

Protein sequence

MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQLPLLTWK

Homology

[Close]

BLAST of Carg15812 vs. NCBI nr
Match: XP_023512486.1 (uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 hypothetical protein SDJN03_07439, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032888.1 hypothetical protein SDJN02_06938, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.7 bits (761), Expect = 5.2e-77
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYDSNGNVVTPARTQLPLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQLPLLTWK 144

[Close]

BLAST of Carg15812 vs. NCBI nr
Match: XP_022959632.1 (uncharacterized protein LOC111460648 [Cucurbita moschata])

HSP 1 Score: 293.5 bits (750), Expect = 9.9e-76
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRHRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNTCVVNA EPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNAPEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYDSNGNVVTPARTQLPLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQLPLLTWK 144

[Close]

BLAST of Carg15812 vs. NCBI nr
Match: XP_022990795.1 (uncharacterized protein LOC111487577 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75
Identity = 141/144 (97.92%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNTCVVNATEPEN NDEMFFSREQRA VWEKNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYDSNGNVVTPARTQ PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQFPLLTWK 144

[Close]

BLAST of Carg15812 vs. NCBI nr
Match: XP_038886392.1 (uncharacterized protein LOC120076591 [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 129/144 (89.58%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ MMH SQATAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 57  MARQLQ-MMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 116

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATV+TTQRVN CVVNATE EN NDEMFFSREQ+AA+W+KNILMGGKCQLPDFSG
Sbjct: 117 IELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSG 176

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 177 VILYDPNGNAVTPAKTPRPLLTWK 199

[Close]

BLAST of Carg15812 vs. NCBI nr
Match: XP_011656615.1 (uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_004865 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 8.7e-64
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQ-IIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNT     TEPENGNDEMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNT-----TEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDPNGNAVTPAKTPRPLLTWK 138

[Close]

BLAST of Carg15812 vs. ExPASy TrEMBL
Match: A0A6J1H530 (uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC111460648 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.8e-76
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRHRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNTCVVNA EPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNAPEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYDSNGNVVTPARTQLPLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQLPLLTWK 144

[Close]

BLAST of Carg15812 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 141/144 (97.92%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNTCVVNATEPEN NDEMFFSREQRA VWEKNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYDSNGNVVTPARTQ PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQFPLLTWK 144

[Close]

BLAST of Carg15812 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQ-IIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNT     TEPENGNDEMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNT-----TEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDPNGNAVTPAKTPRPLLTWK 138

[Close]

BLAST of Carg15812 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ T QVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQ-IIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTT +     VNATEPEN N+EMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTGQ-----VNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYD NGNVVTPA+T  PLLTWK
Sbjct: 121 VILYDPNGNVVTPAKTPRPLLTWK 138

[Close]

BLAST of Carg15812 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ T QVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQ-IIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120
           IELNQEATVVTT +     VNATEPEN N+EMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTGQ-----VNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSG 120

Query: 121 VILYDSNGNVVTPARTQLPLLTWK 145
           VILYD NGNVVTPA+T  PLLTWK
Sbjct: 121 VILYDPNGNVVTPAKTPRPLLTWK 138

[Close]

BLAST of Carg15812 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 9.4e-24
Identity = 60/129 (46.51%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 17  QVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVN 76
           ++G+A AS+      L   ASH+++  RRW AC  YG    +PVI L  + T++      
Sbjct: 17  KMGLASASV-----RLVNLASHSKRKLRRWAAC--YGSRDYEPVIYLQNDMTMMNN---- 76

Query: 77  TCVVNATEPENGNDEMFFSREQ-RAAVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPAR 136
                     NG+  M  S +Q R  +W+KNILMGGKCQLPDFSGVILYD++G VV PA+
Sbjct: 77  ----GGVYEYNGDPSMLLSGDQRRGPLWQKNILMGGKCQLPDFSGVILYDADGQVVPPAK 130

Query: 137 TQLPLLTWK 145
             LPLLTWK
Sbjct: 137 NSLPLLTWK 130

[Close]

BLAST of Carg15812 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 86  ENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSGVILYDSNGNVV------TPARTQLP 140
           +N  +E   + E+   +W++ ILMGGKC+  DFSGVI YDSNG ++      +P  T LP
Sbjct: 91  KNPPEEKATAMEEEHGLWQREILMGGKCEPLDFSGVIYYDSNGRLLNEVPPRSPRGTPLP 150

[Close]

BLAST of Carg15812 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 97  EQRAAVWEKNILMGGKCQLPDFSGVILYDSNGN 130
           E+   VW++ ILMGGKC+  D+SGVI YD +G+
Sbjct: 128 EEEYGVWQREILMGGKCEPLDYSGVIYYDCSGH 160

[Close]

BLAST of Carg15812 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.4e-05
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 0


Query: 102 VWEKNILMGGKCQLPDFSGVILYDSNGN 130
           VW++ ILMG KC+LP FSG+ILYD  G+
Sbjct: 116 VWQRPILMGEKCELPRFSGLILYDECGH 143

The following BLAST results are available for this feature:

BLAST of Carg15812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512486.1	5.2e-77	100.00	uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 ...	[more]
XP_022959632.1	9.9e-76	98.61	uncharacterized protein LOC111460648 [Cucurbita moschata]	[more]
XP_022990795.1	2.9e-75	97.92	uncharacterized protein LOC111487577 [Cucurbita maxima]	[more]
XP_038886392.1	1.7e-67	89.58	uncharacterized protein LOC120076591 [Benincasa hispida]	[more]
XP_011656615.1	8.7e-64	86.81	uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical ...	[more]

BLAST of Carg15812 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H530	4.8e-76	98.61	uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]
A0A6J1JR28	1.4e-75	97.92	uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577...	[more]
A0A0A0K8P1	4.2e-64	86.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1	[more]
A0A5A7SQ79	1.5e-61	84.03	Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C3W7	1.5e-61	84.03	uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=...	[more]

BLAST of Carg15812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71740.1	9.4e-24	46.51	unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bac...	[more]
AT1G49000.1	4.2e-08	43.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18560.1	1.5e-05	54.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G14760.1	4.4e-05	64.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33237:SF4	F14O23.12	coord: 1..144
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15812-RA	Carg15812-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane