Carg15528 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTCTTCTTCCTCCTTCAATTTCCTCCGTCGTCCATTTCCATTTTGAGGGAAATTATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGTGAGATCCCTTCTTCTTTCTGATTTCCCTTCTTCCATTTTCATTCCATCTCATTCTTTCTTCTCTTTGTAGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGTTCGTTTTCCCCCCTTTTTTCTTTAATTTCTTTATGGTTATTACTCTGCGGATGATCGTTTTCTTGATTCATTGATTGATTCTGTTTTGTGTAAATTGATTGGATTTGAAGAGATGAATGTTTGTGGAATTATGTCGATTTTTAGTTTAGGAATTCGATCTGTTTTGTGTAAAATGATTGTTAGATCAATTTAAGCATCAATTGATTTAATTTAACATTTCTAATTTGTTCGAAGGGGAAATTTTGAACCAATGCTTTATTGTTCTTGCTATCATGAACTAAGCTGCATTTTTCTTTGTTCAGGAAGAAAAGGAGGAAGGTAAATTGATGAATTGGATGGTTTTTTAGTTTAGTTATGGATGGAAGAACTTAACAATCTTGTTCTTGTTCTTGTTTTCGGGATTTTCTTGGAACGTAGAAGAGATTGTCATTCTAGGTGGAGGAACTAGGAAGTTCTTTTGATTCGAGTTTGGGATAGAGTCGTTTGGCGTACTTGTTTTATTGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAATAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGATGGTCTTTTAGTTAAGTTATGGATGGAAGAACTTAACCATCTTGTTCCCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAATGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGTATAGAGTCATTTGGACACTTGTTTTATAGGTTTTTATGGTTTGGTACTTGGCTCGAGAGGAACAGTAGAATTTTTCGTGTGTTTGAGAGGGAATTGGACGGTTTTTTAGTTAAGTTATGGATGGAAGACCTTAACAATCTTGTTCTTGTTCTCGCTTCCGGGTTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAAGAAGTTCTTTTGAATCCACCCTTTCAAGTTTGGGATAGAGTCATTTGGAACGCTTGTTTTATTGGTTTTTATGGTCCGGTATTTGGCTCGAGAGAAACAATAGAATTTTTCGAGTGTTTGAGAGGTCGAGGTGTGGGATATGGTTAGATCTAACTCTCCTTCATCTAACCATAGTATGCGTTTATTAGTTAATGATTCTTGGTCCCGTCCATCAAAGATCCCTATTTTCTGTTTCAATTTTTCCCAGTTTATTAGAACCGTTTTTTGATTTATTACATAAGTAGCGAACAAGTTCAATAAATTTATAATTTATAAATGTTCTCGTGCACGAGATGGCCGAAGAAACCCGCTCTCCTTCGAGTGTGTTTTGTCGGTTTCCTACTCGTTGTCATTTTGTGTAGAACTTGATTTTCTTAGCAGAGCTTATTATATGCCATTTTCCTCCTCCGTTTTGCAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAAGATCTGTAGTTTTCAGGGTTGTTGTGTGTTTGTGTACACTTTCTGTGTTGTTTGATACCTAAAGGCTCTCATTTACATGTATGTATACAATACCTAAATAAATAATGGTTTACACAAGTAAATTTTATGTGGAATCTTTGATGGTTTTGGAATTGGAATGTGGAAGCTACAAATATGAGGATGATCGGGCCGAGGGCAGCCCGCTTTTTCCCGATCATTGTCTAGATAGTAACACATTAAGATGTCAATGCTTGGTAGTGAATACG TTCTTCTTCTTCTTCTTCTTCCTCCTTCAATTTCCTCCGTCGTCCATTTCCATTTTGAGGGAAATTATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGAAGAAAAGGAGGAAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAAGATCTGTAGTTTTCAGGGTTGTTGTGTGTTTGTGTACACTTTCTGTGTTGTTTGATACCTAAAGGCTCTCATTTACATGTATGTATACAATACCTAAATAAATAATGGTTTACACAAGTAAATTTTATGTGGAATCTTTGATGGTTTTGGAATTGGAATGTGGAAGCTACAAATATGAGGATGATCGGGCCGAGGGCAGCCCGCTTTTTCCCGATCATTGTCTAGATAGTAACACATTAAGATGTCAATGCTTGGTAGTGAATACG ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGAAGAAAAGGAGGAAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAA MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKFSYTVLLLYVGGVLGLFPIDVAKSVLFGLLGRAVFVSMIMKQCRFSSRLK Homology
BLAST of Carg15528 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of Carg15528 vs. NCBI nr
Match: XP_022928579.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_023529271.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG6588871.1 hypothetical protein SDJN03_17436, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182.6 bits (462), Expect = 2.4e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg15528 vs. NCBI nr
Match: XP_022989747.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]) HSP 1 Score: 178.3 bits (451), Expect = 4.5e-41 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg15528 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 5.5e-31 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Carg15528 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30 Identity = 69/89 (77.53%), Postives = 74/89 (83.15%), Query Frame = 0
BLAST of Carg15528 vs. ExPASy TrEMBL
Match: A0A6J1EL88 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111435344 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg15528 vs. ExPASy TrEMBL
Match: A0A6J1JGP0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486738 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg15528 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Carg15528 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Carg15528 vs. ExPASy TrEMBL
Match: A0A5A7VHS2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00060 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 7.7e-31 Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Carg15528 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein ) HSP 1 Score: 54.3 bits (129), Expect = 9.1e-08 Identity = 47/113 (41.59%), Postives = 52/113 (46.02%), Query Frame = 0
BLAST of Carg15528 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein ) HSP 1 Score: 54.3 bits (129), Expect = 9.1e-08 Identity = 47/113 (41.59%), Postives = 52/113 (46.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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