Carg15479 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15479
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein FAR1-RELATED SEQUENCE 5-like
Location	Carg_Chr06: 10040427 .. 10043145 (+)
RNA-Seq Expression	Carg15479
Synteny	Carg15479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTACTCACTAATTCCTTCTTCATTCTCACCCTCTCCCTTCTTCCCGCCGATCGATCAACCGCTTCTGCCGACGACCTTCTTCCCCTTCATTTTCCGGCACCCATGGCCCAAGACCTTCCGGATTCCCCCACCCATTTCTCCATCATGCGCCCTCTGATCTAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGTAAGCGTCTTCATTCATTCCTTTCTTTTCTCTTTTTTTACACAATGCCTTACTCTCTGCCAACATAAATGCCGCACATTTTCGTAACGCTCTTGTAGAAGTGGGTTTTCGAGTCTAAATCGTCATTGGGTCTCGCTTTACTATGCCCAATTTGGCAGAGTGTTATCTTTTTTTGTCTTTTTTGTGCTTTCATTTCATTTCCCTATATATTTTGGCACAATGTGCGTCTGTTGGTGGGTGGGATACGTTGATGCCTTGAAAGTTTTTGAAATTTTTCTTCATTTCTTGCAATTTTTTATGGGTTATTGACATGGAACAACGACGCTCTTGATATTTGGGGATCTTCTGTGTATAATTCCTTCATATAGTTTGGTGTTTACTTTGATTGAAGCTTGGCTATATACTTCCTGTAGGAGAGTAATGGATTGTCCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGTATGTTTGAGACTTGTTTTGTTCTTTTTTACATAACTAATATGCATTTCTATAGACAATGTCCATACTTGTCATAGTTCATGGTTTTCTATAGACAATATCAGGCTTGCTTTGTCAGATTGCATCAGAATACTTTTCAATCATCAAACTCTAGTGTCGAGTTTTTGGTTTGATAATTTCTGTTCATGTTGAAAGAAGGGATGTTCACTTTTAAGCCCATGTGTAATAGCCCAAGCCTACCTCTAGTAGATATTGTTCGTTTTGATTCGTTACATAGCACCGTCAACCTCATGGTTTTAAAATACGTATACTAGGGAGAGGTTTCCATACCCTTATGAAGGACGATTCGTTCCCTTCTCCAACTGATATGGGATCTCACAATCCACCCCCCTTCGAGGCCCAGCTTCTTTGTTGGCATTCGTTCCCTTCTTCAACTGATGTGAGATCTCACAATCCACCCTCCTTCGGAGTCTAGCATCCTCGCTGGCACACCACCTGATGTCTAGTTTTTATACCATTTGTAACAACCCAAACCCACCGCTAGCAGATATTATTCGCTTTGGCTCCTTATGTATCGTCGTCAGCCTGACGATTTTAAAACGTGTCTTCTTGGGAGAGGTTTCCACTCCCTTATAAAAAATGATGTGTTCCCCTATCTAACCGATATGGGATCACACAATGTATGGTACATTCCTTTTAGTTCTTACTCATTTTCTCCATCATGCTTGATGGGGTACCATGAATTGGATTTTCTTTCTGCAATTTACTTGTTGTCAAGGCTATTACGACTGCACGACGTAGAACGAACAATTACCATTCTAGTTTGTGTTCTTTTCGCCTCAACTGGTGAATTTATGCAATCATCAACTTTTTGGTGGGTGTGCTATAATATAGCCATGGTCGTCCGTGGGCAATTGTATTCGGAAACATCAAGTTTAGTCAAAAGAAATAGATAGATAGCATTCCATCTTCAGTTTAAATGGTTTTCATTTTCTTCATATCTGGAATTCTTATTCGAAACCTATCAAATTTGTTGTGTTTACAACCACATTCTTGATGCACGTAGCTTTGATCATTTTTCGGATACACATGAATTCATTCGAGTTGATAAGTTGGCATCGGCCGTGCGTTCGTTTTGTTTTGCAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAACTT

mRNA sequence

TCAGTACTCACTAATTCCTTCTTCATTCTCACCCTCTCCCTTCTTCCCGCCGATCGATCAACCGCTTCTGCCGACGACCTTCTTCCCCTTCATTTTCCGGCACCCATGGCCCAAGACCTTCCGGATTCCCCCACCCATTTCTCCATCATGCGCCCTCTGATCTAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGAGAGTAATGGATTGTCCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAACTT

Coding sequence (CDS)

ATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAG

Protein sequence

MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIREVEDEEHSGGLNQGWV

Homology

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BLAST of Carg15479 vs. NCBI nr
Match: XP_022932719.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 3.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGGLNQGWV
Sbjct: 236 VKSIREVEDEEHSGGLNQGWV 256

[Close]

BLAST of Carg15479 vs. NCBI nr
Match: KAG7029086.1 (Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 3.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGGLNQGWV
Sbjct: 181 VKSIREVEDEEHSGGLNQGWV 201

[Close]

BLAST of Carg15479 vs. NCBI nr
Match: KAG6597645.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 85  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 144

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 145 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 204

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 205 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 264

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGGLNQGWV
Sbjct: 265 VKSIREVEDEEHSGGLNQGWV 285

[Close]

BLAST of Carg15479 vs. NCBI nr
Match: XP_023539030.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-110
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGG NQGWV
Sbjct: 236 VKSIREVEDEEHSGGWNQGWV 256

[Close]

BLAST of Carg15479 vs. NCBI nr
Match: XP_022972112.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 2.9e-110
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGR VGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRHVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           +KSIREVEDEEHSGGLNQGWV
Sbjct: 236 MKSIREVEDEEHSGGLNQGWV 256

[Close]

BLAST of Carg15479 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 64
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 65  VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 116
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

[Close]

BLAST of Carg15479 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.1e-18
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G+EF + +EAREFY  Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 40  GVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 99

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLL 110
                          +R GC A IR+  RD GKW + +  K+HNH L
Sbjct: 100 ---------------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]

BLAST of Carg15479 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G+EF + +EAR++Y +Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 25  GLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 84

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH 108
                          +R GC A IR+  RD GKW + +  K+HNH
Sbjct: 85  ---------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

[Close]

BLAST of Carg15479 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-15
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 4   AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 63
           AEP +GMEF S  EA+ FY  Y R++GFT ++      R +  V  ++FVCS    R+K+
Sbjct: 47  AEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL----LPRTDGSVSVREFVCSSSSKRSKR 106

Query: 64  YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLS 112
            +S             E C AM+R+ L+   KW VTKFVK+H H L S
Sbjct: 107 RLS-------------ESCDAMVRIELQGHEKWVVTKFVKEHTHGLAS 137

[Close]

BLAST of Carg15479 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 6   PYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 65
           P +GMEF S D+A  +Y  Y   VGF VR+ ++   R + +  G    CS +GF+    V
Sbjct: 85  PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDV 144

Query: 66  SRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLL 110
           +R  +       TR GC AMIR+   D  +W V +   DHNHLL
Sbjct: 145 NRVRK------ETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLL 182

[Close]

BLAST of Carg15479 vs. ExPASy TrEMBL
Match: A0A6J1EXT6 (protein FAR1-RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111439184 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.7e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGGLNQGWV
Sbjct: 236 VKSIREVEDEEHSGGLNQGWV 256

[Close]

BLAST of Carg15479 vs. ExPASy TrEMBL
Match: A0A6J1I3W4 (protein FAR1-RELATED SEQUENCE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111470744 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGR VGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRHVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           +KSIREVEDEEHSGGLNQGWV
Sbjct: 236 MKSIREVEDEEHSGGLNQGWV 256

[Close]

BLAST of Carg15479 vs. ExPASy TrEMBL
Match: A0A6J1CVL2 (protein FAR1-RELATED SEQUENCE 5-like OS=Momordica charantia OX=3673 GN=LOC111014639 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 188/201 (93.53%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           +DG EPYIGMEFGSRDEAREFYVNYGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  VDGVEPYIGMEFGSRDEAREFYVNYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLL EDEKDKRIRELS+ELYNE+QKCKRKCAAYEEQLKA+LKELE HTECISNKVAEV
Sbjct: 176 GKNLLGEDEKDKRIRELSVELYNERQKCKRKCAAYEEQLKAILKELETHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIRE+E+EE SGGLNQGW+
Sbjct: 236 VKSIREIEEEEESGGLNQGWI 256

[Close]

BLAST of Carg15479 vs. ExPASy TrEMBL
Match: A0A5A7TSR9 (Protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003520 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDG EPYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKN L+EDEKDKRIR+LSLELYNE+QK KRKCAAYEEQLK +LKELEMHTECISNKVAEV
Sbjct: 176 GKN-LSEDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVE+EE S GLN+ W+
Sbjct: 236 VKSIREVEEEEESKGLNERWI 255

[Close]

BLAST of Carg15479 vs. ExPASy TrEMBL
Match: A0A1S3BX14 (protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103494535 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDG EPYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKN L+EDEKDKRIR+LSLELYNE+QK KRKCAAYEEQLK +LKELEMHTECISNKVAEV
Sbjct: 176 GKN-LSEDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVE+EE S GLN+ W+
Sbjct: 236 VKSIREVEEEEESKGLNERWI 255

[Close]

BLAST of Carg15479 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEG----FR 64
           EP  G+ F S D A+ FY +Y RR+GF +R+   RRS  + +++ + F C+KEG     R
Sbjct: 21  EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80

Query: 65  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH-LLLSPSKVPWRG 124
            K    RK R     P TREGC+AMI +     GKW +TKFVK+HNH L++SP +     
Sbjct: 81  GKFGSVRKPR-----PSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARH-- 140

Query: 125 SGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAE 184
                 T DEKDKRI+EL++EL N+    KR CAAY+EQL A  K +E H+  I+ KV  
Sbjct: 141 ------TLDEKDKRIQELTIELRNK----KRLCAAYKEQLDAFAKIVEEHSNQIAKKVEN 197

Query: 185 VVKSIREVEDEEHS 194
           VV +++E E  EH+
Sbjct: 201 VVNNLKEFEHLEHA 197

[Close]

BLAST of Carg15479 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.0e-33
Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGF---RA 64
           EP+IGMEF S + A+ FY NY   +GF +R+   RRS  +  V+ +  VC+KEGF   R 
Sbjct: 32  EPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRP 91

Query: 65  KKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSG 124
           ++  SRK R      ITREGC+A+I +     G W VTKF K+HNH LL P     R + 
Sbjct: 92  RRSESRKPR-----AITREGCKALIVVKREKSGTWLVTKFEKEHNHPLL-PLSPNVRRNF 151

Query: 125 KNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVV 184
           +   T DEKD +IRELS EL  E    +R+C A ++QL  VLKE+E H+  ++  +  V+
Sbjct: 152 QLPQTPDEKDAKIRELSAELSRE----RRRCTALQQQLDMVLKEMEEHSNHLTININSVI 208

Query: 185 KSIREVE 189
           +S+R++E
Sbjct: 212 QSVRDIE 208

[Close]

BLAST of Carg15479 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G EF S   A  FY  Y  +VGF +R+    RSR +   IG+  VC+KEG+R  
Sbjct: 67  GDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLP 126

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGK 122
              S++D+++     TR GC+AMI +   + GKW +TKFVK+HNH L+ P +V  RG   
Sbjct: 127 ---SKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRVR-RGCIY 186

Query: 123 NLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVK 182
           +    +E DK I+EL  +L  E    K++ A Y+  L+ + +++E H E +S ++  +V 
Sbjct: 187 DQY-PNEHDK-IQELMQQLAAE----KKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVD 245

Query: 183 SIREVEDEEH 193
           ++R +E  +H
Sbjct: 247 NVRNLEQRDH 245

[Close]

BLAST of Carg15479 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G EF S   A  FY  Y  +VGF +R+    RSR +   IG+  VC+KEG+R  
Sbjct: 67  GDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLP 126

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGK 122
              S++D+++     TR GC+AMI +   + GKW +TKFVK+HNH L+ P +V  RG   
Sbjct: 127 ---SKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRVR-RGCIY 186

Query: 123 NLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVK 182
           +    +E DK I+EL  +L  E    K++ A Y+  L+ + +++E H E +S ++  +V 
Sbjct: 187 DQY-PNEHDK-IQELMQQLAAE----KKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVD 245

Query: 183 SIREVEDEEH 193
           ++R +E  +H
Sbjct: 247 NVRNLEQRDH 245

[Close]

BLAST of Carg15479 vs. TAIR 10
Match: AT4G38180.1 (FAR1-related sequence 5 )

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-26
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 64
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 65  VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 116
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

The following BLAST results are available for this feature:

BLAST of Carg15479 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932719.1	3.5e-111	100.00	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata]	[more]
KAG7029086.1	3.5e-111	100.00	Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597645.1	3.5e-111	100.00	Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023539030.1	1.7e-110	99.50	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972112.1	2.9e-110	99.00	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita maxima]	[more]

BLAST of Carg15479 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL8	4.0e-25	48.21	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
Q3E7I5	6.1e-18	43.93	Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 S...	[more]
Q9M8J3	2.3e-17	41.90	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=...	[more]
Q9ZVC9	2.8e-15	40.74	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=...	[more]
Q9SSQ4	1.0e-12	38.46	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=...	[more]

BLAST of Carg15479 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXT6	1.7e-111	100.00	protein FAR1-RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1I3W4	1.4e-110	99.00	protein FAR1-RELATED SEQUENCE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111470744...	[more]
A0A6J1CVL2	6.2e-106	93.53	protein FAR1-RELATED SEQUENCE 5-like OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5A7TSR9	1.7e-100	91.04	Protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BX14	1.7e-100	91.04	protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103494535 PE=...	[more]

BLAST of Carg15479 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43280.1	1.8e-33	44.33	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	9.0e-33	43.32	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	2.7e-29	37.89	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.2	2.7e-29	37.89	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	2.8e-26	48.21	FAR1-related sequence 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR46328	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	coord: 2..192
None	No IPR available	PANTHER	PTHR46328:SF12	FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN	coord: 2..192
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 20..110 e-value: 1.5E-26 score: 92.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15479-RA	Carg15479-RA	mRNA