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Carg15412 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTACTTGGGTTCATGTATTTGTGGTTGTGTTGTGTTCTTGGGTCTTTCTCCTCCTCCTCCTCCCCCAGCTACCAAAGAGAGGGCAATTGAAGAGAGGTGTTTTCCCAGAATACGAGGTAAATCAATTTTGTGTGTTGTGGATCTGTTTGGTGACAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTGTAAGCAACTGCAACAACACCATATTTCCCCCCACTTTCCTATCGCTGTGTGTTTGTATGTATGTTTGTTTGCTGTTAATGGTTGTTTGTTTGTGGCAGCTGGTGAGCCCTGGGGCATGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGGTAAATAACTGAACTTGTTTCTTTCCCATCATCTCTGTTAAATGAAATTGCTTGTTTTTTCTTCTGGGTTGAAGTAGAAGTTGAAGAAAATGCCTTTCCTTTTCTTTTTGTTCGTGGGTTTTGAATTTGCAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA ATGGGCTACTTGGGTTCATGTATTTGTGGTTGTGTTGTGTTCTTGGGTCTTTCTCCTCCTCCTCCTCCCCCAGCTACCAAAGAGAGGGCAATTGAAGAGAGGTGTTTTCCCAGAATACGAGGTAAATCAATTTTGTGTGTTGTGGATCTGTTTGGTGACAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTCTGGTGAGCCCTGGGGCATGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA ATGGGCTACTTGGGTTCATGTATTTGTGGTTGTGTTGTGTTCTTGGGTCTTTCTCCTCCTCCTCCTCCCCCAGCTACCAAAGAGAGGGCAATTGAAGAGAGGTGTTTTCCCAGAATACGAGGTAAATCAATTTTGTGTGTTGTGGATCTGTTTGGTGACAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTCTGGTGAGCCCTGGGGCATGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA MGYLGSCICGCVVFLGLSPPPPPPATKERAIEERCFPRIRGKSILCVVDLFGDRNSEGVTTLRNGAGTSPSPEKEDRYYATRGSAGAAVVDENGRISTNSNGNSNSKAEERGFVWPKLFIALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLVSPGAWLSEMSQERYEVREKKSTKKRPTGLKAMGSMESDSE Homology
BLAST of Carg15412 vs. NCBI nr
Match: KAG7029150.1 (hypothetical protein SDJN02_10335, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.9 bits (1008), Expect = 1.6e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg15412 vs. NCBI nr
Match: KAG6597703.1 (hypothetical protein SDJN03_10883, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70 Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg15412 vs. NCBI nr
Match: XP_022932617.1 (uncharacterized protein LOC111439121 isoform X1 [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg15412 vs. NCBI nr
Match: XP_022932618.1 (uncharacterized protein LOC111439121 isoform X2 [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg15412 vs. NCBI nr
Match: XP_022972123.1 (uncharacterized protein LOC111470755 isoform X2 [Cucurbita maxima]) HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70 Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg15412 vs. ExPASy TrEMBL
Match: A0A6J1EX97 (uncharacterized protein LOC111439121 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439121 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg15412 vs. ExPASy TrEMBL
Match: A0A6J1F285 (uncharacterized protein LOC111439121 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439121 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg15412 vs. ExPASy TrEMBL
Match: A0A6J1I3X6 (uncharacterized protein LOC111470755 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470755 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70 Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg15412 vs. ExPASy TrEMBL
Match: A0A6J1I8Z1 (uncharacterized protein LOC111470755 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470755 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70 Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg15412 vs. ExPASy TrEMBL
Match: A0A6J1DQU0 (uncharacterized protein LOC111022959 OS=Momordica charantia OX=3673 GN=LOC111022959 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.9e-54 Identity = 127/150 (84.67%), Postives = 133/150 (88.67%), Query Frame = 0
BLAST of Carg15412 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42 Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Carg15412 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42 Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Carg15412 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 148.7 bits (374), Expect = 5.0e-36 Identity = 90/149 (60.40%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Carg15412 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-22 Identity = 72/202 (35.64%), Postives = 105/202 (51.98%), Query Frame = 0
BLAST of Carg15412 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 92.8 bits (229), Expect = 3.3e-19 Identity = 64/184 (34.78%), Postives = 93/184 (50.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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