Carg15407 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15407
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GATA transcription factor 12-like
Location	Carg_Chr06: 10400041 .. 10401064 (+)
RNA-Seq Expression	Carg15407
Synteny	Carg15407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACTATTCAATTTCCCTTCTCTCTCTCTCTCTCTCCCCTTTGCTGTTGCTACCATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGTATGTCATTTTAAACTCCATTGCTTTGTTTTTTTTTTTTGCCTTGTTGTTCTCATCACACCAATGTTGAGTTTCATTGAATTCAGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

mRNA sequence

AATTACTATTCAATTTCCCTTCTCTCTCTCTCTCTCTCCCCTTTGCTGTTGCTACCATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Coding sequence (CDS)

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Protein sequence

MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS

Homology

[Close]

BLAST of Carg15407 vs. NCBI nr
Match: KAG7029155.1 (GATA transcription factor 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572.0 bits (1473), Expect = 2.9e-159
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG
Sbjct: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
           EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 293

[Close]

BLAST of Carg15407 vs. NCBI nr
Match: KAG6597708.1 (GATA transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSS--LPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRR 120
           AKGSS  LPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295

[Close]

BLAST of Carg15407 vs. NCBI nr
Match: XP_022932754.1 (GATA transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-153
Identity = 288/293 (98.29%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSE EQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSS  LPLPLPPPQLSTHLNNPPPPPNSLS PTPSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSS--LPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG
Sbjct: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
           EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 291

[Close]

BLAST of Carg15407 vs. NCBI nr
Match: XP_023540763.1 (GATA transcription factor 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551.2 bits (1419), Expect = 5.4e-153
Identity = 286/293 (97.61%), Postives = 287/293 (97.95%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSS    LPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSS----LPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA+GGG
Sbjct: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
            EEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 GEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 289

[Close]

BLAST of Carg15407 vs. NCBI nr
Match: XP_022972249.1 (GATA transcription factor 12-like [Cucurbita maxima])

HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148
Identity = 281/293 (95.90%), Postives = 283/293 (96.59%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVD NLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSS    LPLPPPQLSTHLNNPPPPPNSLSHP PSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSS----LPLPPPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSI PLIGQHHLDQLNLLP+KQSLQLTSSSAD LLLQQTYWLADSELLLPHKARGGG
Sbjct: 121 PANTSICPLIGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
            EEREKKV+MDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 -EEREKKVEMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of Carg15407 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27
Identity = 96/236 (40.68%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 48  LEWLSAFVEECLSAKG-SSLPLPLPLPPPQLS----THLNNPPPPPNSLSHPTPSSSDSP 107
           LEWLS FVEE  + +    L L   L  PQ +    THL  P P    L H      +S 
Sbjct: 80  LEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEP---ELDHQFIDIDESN 139

Query: 108 FSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQT 167
                AVP+KARSKR ++ A+T    L+     D+ N  P K                  
Sbjct: 140 V----AVPAKARSKRSRSAASTWASRLLSLADSDETN--PKK------------------ 199

Query: 168 YWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQR 227
                       K R   E++    +D+D  +              +G GRRC HC  ++
Sbjct: 200 ------------KQRRVKEQDFAGDMDVDCGE--------------SGGGRRCLHCATEK 259

Query: 228 TPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 279
           TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 TPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of Carg15407 vs. ExPASy Swiss-Prot
Match: Q8LAU9 (GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 212 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 271
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 272 KRVMEMR 279
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of Carg15407 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.8e-26
Identity = 99/257 (38.52%), Postives = 131/257 (50.97%), Query Frame = 0


Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPPPQLSTHLNNPPPP 87
           ++   DLC   + + ++   LEWLS  V+E LS        P  +   +L +   + P P
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS--------PEDVHKLELISGFKSRPDP 124

Query: 88  PNSLSHP-TPSSSDSPFSHFSAVPSKARSKR-RQAPANTSIRPLIGQHHLDQ----LNLL 147
            +    P  P+SS   F+   +VP+KARSKR R A  N + R L+ +   D       +L
Sbjct: 125 KSDTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETIL 184

Query: 148 PSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSL 207
            S+Q   L+  ++  LL+            L  K    G   R+K V             
Sbjct: 185 SSQQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVS------------ 244

Query: 208 GLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPT 267
               + G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPT
Sbjct: 245 --SPESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPT 283

Query: 268 FVSFLHSNSHKRVMEMR 279
           FV   HSNSH++VME+R
Sbjct: 305 FVLAKHSNSHRKVMELR 283

[Close]

BLAST of Carg15407 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 209 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 268
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 269 NSHKRVMEMR 279
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]

BLAST of Carg15407 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.4e-25
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 210 GSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSN 269
           G  RRC+HC +++TPQWR GPLGPKTLCNACGVR+ KSGRLVPEYRPA+SPTFV   HSN
Sbjct: 176 GGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSN 235

Query: 270 SHKRVMEMR 279
           SH++VME+R
Sbjct: 236 SHRKVMELR 243

[Close]

BLAST of Carg15407 vs. ExPASy TrEMBL
Match: A0A6J1EXX1 (GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.8e-154
Identity = 288/293 (98.29%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSE EQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSS  LPLPLPPPQLSTHLNNPPPPPNSLS PTPSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSS--LPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG
Sbjct: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
           EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 291

[Close]

BLAST of Carg15407 vs. ExPASy TrEMBL
Match: A0A6J1IAY5 (GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.6e-149
Identity = 281/293 (95.90%), Postives = 283/293 (96.59%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVD NLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 120
           AKGSS    LPLPPPQLSTHLNNPPPPPNSLSHP PSSSDSPFSHFSAVPSKARSKRRQA
Sbjct: 61  AKGSS----LPLPPPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKRRQA 120

Query: 121 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           PANTSI PLIGQHHLDQLNLLP+KQSLQLTSSSAD LLLQQTYWLADSELLLPHKARGGG
Sbjct: 121 PANTSICPLIGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARGGG 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
            EEREKKV+MDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC
Sbjct: 181 -EEREKKVEMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 294
           GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of Carg15407 vs. ExPASy TrEMBL
Match: A0A0A0LD86 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.0e-101
Identity = 212/290 (73.10%), Postives = 238/290 (82.07%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSK-RRQ 120
            KGS+LPLP   PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSK RR+
Sbjct: 61  TKGSTLPLP---PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRR 120

Query: 121 APANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGG 180
            P+  S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KARGG
Sbjct: 121 TPSKMSVLPLISR-RLRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKARGG 180

Query: 181 GEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNA 240
              EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNA
Sbjct: 181 ---EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNA 240

Query: 241 CGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 290
           CGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 CGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]

BLAST of Carg15407 vs. ExPASy TrEMBL
Match: A0A5A7U7L1 (GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00120 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 213/290 (73.45%), Postives = 236/290 (81.38%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSK-RRQ 120
            KGS+ PLP   PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSK RR+
Sbjct: 61  TKGSTHPLP---PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRR 120

Query: 121 APAN-TSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
            P+N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +ARG
Sbjct: 121 TPSNKMSVLPLISR-RLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           G   EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCN
Sbjct: 181 G---EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 289
           ACGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 ACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]

BLAST of Carg15407 vs. ExPASy TrEMBL
Match: A0A1S3CNM0 (GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 213/290 (73.45%), Postives = 236/290 (81.38%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSK-RRQ 120
            KGS+ PLP   PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSK RR+
Sbjct: 61  TKGSTHPLP---PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRR 120

Query: 121 APAN-TSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
            P+N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +ARG
Sbjct: 121 TPSNKMSVLPLISR-RLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           G   EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCN
Sbjct: 181 G---EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 289
           ACGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 ACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]

BLAST of Carg15407 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-28
Identity = 96/236 (40.68%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 48  LEWLSAFVEECLSAKG-SSLPLPLPLPPPQLS----THLNNPPPPPNSLSHPTPSSSDSP 107
           LEWLS FVEE  + +    L L   L  PQ +    THL  P P    L H      +S 
Sbjct: 80  LEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEP---ELDHQFIDIDESN 139

Query: 108 FSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQT 167
                AVP+KARSKR ++ A+T    L+     D+ N  P K                  
Sbjct: 140 V----AVPAKARSKRSRSAASTWASRLLSLADSDETN--PKK------------------ 199

Query: 168 YWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQR 227
                       K R   E++    +D+D  +              +G GRRC HC  ++
Sbjct: 200 ------------KQRRVKEQDFAGDMDVDCGE--------------SGGGRRCLHCATEK 259

Query: 228 TPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 279
           TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 TPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of Carg15407 vs. TAIR 10
Match: AT3G24050.1 (GATA transcription factor 1 )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 212 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 271
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 272 KRVMEMR 279
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of Carg15407 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-27
Identity = 99/257 (38.52%), Postives = 131/257 (50.97%), Query Frame = 0


Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPPPQLSTHLNNPPPP 87
           ++   DLC   + + ++   LEWLS  V+E LS        P  +   +L +   + P P
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS--------PEDVHKLELISGFKSRPDP 124

Query: 88  PNSLSHP-TPSSSDSPFSHFSAVPSKARSKR-RQAPANTSIRPLIGQHHLDQ----LNLL 147
            +    P  P+SS   F+   +VP+KARSKR R A  N + R L+ +   D       +L
Sbjct: 125 KSDTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETIL 184

Query: 148 PSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSL 207
            S+Q   L+  ++  LL+            L  K    G   R+K V             
Sbjct: 185 SSQQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVS------------ 244

Query: 208 GLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPT 267
               + G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPT
Sbjct: 245 --SPESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPT 283

Query: 268 FVSFLHSNSHKRVMEMR 279
           FV   HSNSH++VME+R
Sbjct: 305 FVLAKHSNSHRKVMELR 283

[Close]

BLAST of Carg15407 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 209 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 268
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 269 NSHKRVMEMR 279
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]

BLAST of Carg15407 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 )

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-26
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 210 GSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSN 269
           G  RRC+HC +++TPQWR GPLGPKTLCNACGVR+ KSGRLVPEYRPA+SPTFV   HSN
Sbjct: 176 GGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSN 235

Query: 270 SHKRVMEMR 279
           SH++VME+R
Sbjct: 236 SHRKVMELR 243

The following BLAST results are available for this feature:

BLAST of Carg15407 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029155.1	2.9e-159	100.00	GATA transcription factor 9 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597708.1	3.6e-157	98.98	GATA transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022932754.1	1.4e-153	98.29	GATA transcription factor 12-like [Cucurbita moschata]	[more]
XP_023540763.1	5.4e-153	97.61	GATA transcription factor 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972249.1	1.8e-148	95.90	GATA transcription factor 12-like [Cucurbita maxima]	[more]

BLAST of Carg15407 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82632	4.7e-27	40.68	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
Q8LAU9	4.0e-26	77.61	GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2	[more]
P69781	6.8e-26	38.52	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
O49743	1.5e-25	75.71	GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1	[more]
O49741	4.4e-25	75.36	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]

BLAST of Carg15407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXX1	6.8e-154	98.29	GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 ...	[more]
A0A6J1IAY5	8.6e-149	95.90	GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE...	[more]
A0A0A0LD86	1.0e-101	73.10	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 P...	[more]
A0A5A7U7L1	1.4e-98	73.45	GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CNM0	1.4e-98	73.45	GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 S...	[more]

BLAST of Carg15407 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32890.1	3.4e-28	40.68	GATA transcription factor 9	[more]
AT3G24050.1	2.8e-27	77.61	GATA transcription factor 1	[more]
AT5G25830.1	4.8e-27	38.52	GATA transcription factor 12	[more]
AT3G60530.1	1.1e-26	75.71	GATA transcription factor 4	[more]
AT2G45050.1	3.1e-26	75.36	GATA transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 209..260 e-value: 1.2E-17 score: 74.6
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 215..249 e-value: 1.4E-15 score: 56.6
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 215..240
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 209..252 score: 12.927383
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 214..262 e-value: 1.47781E-13 score: 62.005
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 210..278 e-value: 1.8E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..129
None	No IPR available	PANTHER	PTHR45658:SF85	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 7..285
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 7..285
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 211..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15407-RA	Carg15407-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding