Carg15381 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15381
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nucleolin 2-like isoform X1
Location	Carg_Chr03: 9514954 .. 9517238 (+)
RNA-Seq Expression	Carg15381
Synteny	Carg15381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAACAAAGCAGAGGAGATGGATAAAAAATGGAATCTTTCTGTGATTTTTAACATTGGGGGAAGTGAGAAGGGCACATAGCGTTGGGGGATTGGGAATCCCAATTGGCGCTTAAGCAATTTGGGGAGTGAGTGAACCTCCAGATCGTCATCCCCACCTGTCCCTTCCTCTGCCATATCCTTTTTCCATATATATATATAAACCCACCTCACAATTTTTGCTCTCTTTCAATCTTTTCTGAGGCTGCGGAGCCTCCAAGTTTGTGTTTCTCCAGAAACTCCCTTCCCTTCCATTGCTTTTTGTGTTCATCATGCCGTCAGGTGCTAAGAAGCGAAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCACATCAACCCTTCTTCCAACGCCTCCCAAGGTACACTCCTCATACCCCCTTTTCCGATTTAAGGGCCCTTTCGTGTTCATCCGATTCATCTCTCGTCCTCTCACTATATTCTTATGTAATTTCTGAAGTGGGTTTTGCCACTGATGCCTCCTCCTTGCTTTTGGGATCTGATTAAACTAGATTGGATTTGGTTTTTGATTTGAACCCTTGTAATTACTATCTCTTTTATTATTGTTTATACCCCCCAATTAGATTTGTTGACTGATTCAAACTTCAGCTTTATTTTAATCCCCTGTTTTTTAATTTCAATTTTCCCCCTTCGGACGCTTCATTCCAAAGTGAGCAGAGTTTTGGGGTACTTTAAGCTTCAGTTCTTTGATTGTTTTGGAGAGAATGATTTCACTTGAATTAGATTACTGCAAATTGTTTCATCTGGGGATTTACTTAATTCTGTGTTGGATTTCTTCTGCTTATAATTCTGTTCATTTCAGGAAATGAGGATGTTAAGAACCGAAATGATAAGGGAAGTGACAGTGGTGAGGTTGAATCCCCAGCTTCTGAGAATCAGCCAAGCCACAGCAATCCATTTGGTAAGGGGAATAAGGAAGTAGAAGAGAGCAGCTCCTCCAATTCTGGGACTAATCAGAAACTAGGACTTGCTTCTGAGACAAAAAATGGCACTCTTCAGAATCATAGCAGTAGCAGTTCCGATGATGAGTCTGTAGATACAACAAAGGAACCAGAGGTATGTACTCCGCTTTCGAAATTTGAAACTGCAACCTACTCTTATCAGCAACATTAGTTTGCAGCTCTAAGAACTTACATGGTGGATGGATAGGTACTTGATGAGAAGATTGCGCCGACGGCTGCTTCTATTGTTAACTCGGTTACGCCAGAGGTCTCAGCATCGGAGGAAACTATCGGCGTCGTTGAAAGTGCTTCTGTTGGAAATACTGCCATACCTGATATGATTACTTCAGAAAAGTTGTCACTGACAGCTCCAAAGGATCTCTCATCAAAACCAAATGAAGATAGAAATTTACACTCATCAGGTGAATCTGTTCATAAAGGCTCTTCTTCTTCTGATGCCTTTGAATTTGCATCTGGAAAACTTAGATTGAAACTAATAATTTTGCAGCACATAACAAAGGGTCTGGAAGTGCAGAAAATTTCAACCCAGAATCTGAGGATCAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAATTTCTTGTCATTGCTCAACACAGCAGCAGAGCAGATCATATGTTAATTGTTCCTTGAGAAATGAGTTTTTCTTTTCCAATTTTATGCAGCCGTTGATTGTGTCGAGACCTCCCGTGCCACGAAGAACCTCGTGGTTGAGTTGCTGTGGTTTATGTGATGTATTTACGAGCTCGAACTGATAGCTTCGCGTACAGTTTCTATATATAGGGTTAGTCAACGATTACCTTGCCCAATATTAAATGCTGCTCATATCAGGAAGCTGTCTGTGTTTGAAAATTTAATTGTTATGAAAGATGAAGAAAGTTTTCATTGACACTCAGATAATTTGTTTTATGTTGAGGCAGGGATGAAAGTCTTCACAGGACGGGTGAAGGTTAATCGGCAAGGGTCGTTATGAAAGCATGATAACATAGACGACATCGAACTTGATGAGCCCAGCTTAAGGTAGATCATCTTCTTGGATTTAGAAGCTAGCAGCATGAAGATATTCCCTTACATGTCTTTGTCTTACAGTGAGTTTTCTTTTCTTGGAGCATAATGTTCTCGATTTTGCATTGGTTCGACATTTCGCAGTTAAATTATCGTAAATGTTTCGATTGTGTTGATAATCTGTTATCACCTGACTTTATTATTCATTTGACATCTGCTATTGCTTAGCTGAATGAATTCTCTCTTAACGTTTGCAATGAA

mRNA sequence

TACAAACAAAGCAGAGGAGATGGATAAAAAATGGAATCTTTCTGTGATTTTTAACATTGGGGGAAGTGAGAAGGGCACATAGCGTTGGGGGATTGGGAATCCCAATTGGCGCTTAAGCAATTTGGGGAGTGAGTGAACCTCCAGATCGTCATCCCCACCTGTCCCTTCCTCTGCCATATCCTTTTTCCATATATATATATAAACCCACCTCACAATTTTTGCTCTCTTTCAATCTTTTCTGAGGCTGCGGAGCCTCCAAGTTTGTGTTTCTCCAGAAACTCCCTTCCCTTCCATTGCTTTTTGTGTTCATCATGCCGTCAGGTGCTAAGAAGCGAAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCACATCAACCCTTCTTCCAACGCCTCCCAAGGAAATGAGGATGTTAAGAACCGAAATGATAAGGGAAGTGACAGTGGTGAGGTTGAATCCCCAGCTTCTGAGAATCAGCCAAGCCACAGCAATCCATTTGGTAAGGGGAATAAGGAAGTAGAAGAGAGCAGCTCCTCCAATTCTGGGACTAATCAGAAACTAGGACTTGCTTCTGAGACAAAAAATGGCACTCTTCAGAATCATAGCAGTAGCAGTTCCGATGATGAGTCTGTAGATACAACAAAGGAACCAGAGGTACTTGATGAGAAGATTGCGCCGACGGCTGCTTCTATTGTTAACTCGGTTACGCCAGAGGTCTCAGCATCGGAGGAAACTATCGGCGTCGTTGAAAGTGCTTCTGTTGGAAATACTGCCATACCTGATATGATTACTTCAGAAAAGTTGTCACTGACAGCTCCAAAGGATCTCTCATCAAAACCAAATGAAGATAGAAATTTACACTCATCAGCACATAACAAAGGGTCTGGAAGTGCAGAAAATTTCAACCCAGAATCTGAGGATCAGCCGTTGATTGTGTCGAGACCTCCCGTGCCACGAAGAACCTCGTGGTTGAGTTGCTGTGGTTTATGTGATGTATTTACGAGCTCGAACTGATAGCTTCGCGTACAGTTTCTATATATAGGGGATGAAAGTCTTCACAGGACGGGTGAAGGTTAATCGGCAAGGGTCGTTATGAAAGCATGATAACATAGACGACATCGAACTTGATGAGCCCAGCTTAAGGTAGATCATCTTCTTGGATTTAGAAGCTAGCAGCATGAAGATATTCCCTTACATGTCTTTGTCTTACAGTGAGTTTTCTTTTCTTGGAGCATAATGTTCTCGATTTTGCATTGGTTCGACATTTCGCAGTTAAATTATCGTAAATGTTTCGATTGTGTTGATAATCTGTTATCACCTGACTTTATTATTCATTTGACATCTGCTATTGCTTAGCTGAATGAATTCTCTCTTAACGTTTGCAATGAA

Coding sequence (CDS)

ATGCCGTCAGGTGCTAAGAAGCGAAAAGCTGCCAAGAAAAAGAAGGAATTGGAAGCTCACATCAACCCTTCTTCCAACGCCTCCCAAGGAAATGAGGATGTTAAGAACCGAAATGATAAGGGAAGTGACAGTGGTGAGGTTGAATCCCCAGCTTCTGAGAATCAGCCAAGCCACAGCAATCCATTTGGTAAGGGGAATAAGGAAGTAGAAGAGAGCAGCTCCTCCAATTCTGGGACTAATCAGAAACTAGGACTTGCTTCTGAGACAAAAAATGGCACTCTTCAGAATCATAGCAGTAGCAGTTCCGATGATGAGTCTGTAGATACAACAAAGGAACCAGAGGTACTTGATGAGAAGATTGCGCCGACGGCTGCTTCTATTGTTAACTCGGTTACGCCAGAGGTCTCAGCATCGGAGGAAACTATCGGCGTCGTTGAAAGTGCTTCTGTTGGAAATACTGCCATACCTGATATGATTACTTCAGAAAAGTTGTCACTGACAGCTCCAAAGGATCTCTCATCAAAACCAAATGAAGATAGAAATTTACACTCATCAGCACATAACAAAGGGTCTGGAAGTGCAGAAAATTTCAACCCAGAATCTGAGGATCAGCCGTTGATTGTGTCGAGACCTCCCGTGCCACGAAGAACCTCGTGGTTGAGTTGCTGTGGTTTATGTGATGTATTTACGAGCTCGAACTGA

Protein sequence

MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSNPFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKIAPTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDRNLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN

Homology

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BLAST of Carg15381 vs. NCBI nr
Match: KAG7034681.1 (hypothetical protein SDJN02_04411 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 233

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BLAST of Carg15381 vs. NCBI nr
Match: XP_023543820.1 (uncharacterized protein LOC111803573 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110
Identity = 225/233 (96.57%), Postives = 227/233 (97.42%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           AP AASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+DLSSKPNED 
Sbjct: 121 APMAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDLSSKPNEDT 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH KGS +AENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHIKGSENAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 233

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BLAST of Carg15381 vs. NCBI nr
Match: XP_022925782.1 (nucleolin 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 408.7 bits (1049), Expect = 3.4e-110
Identity = 225/233 (96.57%), Postives = 228/233 (97.85%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSS ASQGNEDVKNR+DKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSIASQGNEDVKNRSDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+D SSKPNEDR
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDPSSKPNEDR 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH+KGS SAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHSKGSESAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 233

[Close]

BLAST of Carg15381 vs. NCBI nr
Match: XP_022978756.1 (uncharacterized protein LOC111478620 isoform X1 [Cucurbita maxima])

HSP 1 Score: 401.4 bits (1030), Expect = 5.5e-108
Identity = 222/233 (95.28%), Postives = 227/233 (97.42%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHI+PSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHISPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLG+A+ETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGIAAETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+DLSSKPNED 
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDLSSKPNEDT 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH KGS +AENFNPESEDQPLI SRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHIKGSENAENFNPESEDQPLI-SRPPVPRRTSWLSCCGLCDVFTSSN 232

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BLAST of Carg15381 vs. NCBI nr
Match: XP_022925783.1 (uncharacterized protein LOC111433088 isoform X2 [Cucurbita moschata])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 220/233 (94.42%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSS ASQGNEDVKNR+DKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSIASQGNEDVKNRSDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPE     I
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPE-----I 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+D SSKPNEDR
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDPSSKPNEDR 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH+KGS SAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHSKGSESAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 228

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BLAST of Carg15381 vs. ExPASy TrEMBL
Match: A0A6J1ECK7 (nucleolin 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433088 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 225/233 (96.57%), Postives = 228/233 (97.85%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSS ASQGNEDVKNR+DKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSIASQGNEDVKNRSDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+D SSKPNEDR
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDPSSKPNEDR 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH+KGS SAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHSKGSESAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 233

[Close]

BLAST of Carg15381 vs. ExPASy TrEMBL
Match: A0A6J1INX3 (uncharacterized protein LOC111478620 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478620 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 222/233 (95.28%), Postives = 227/233 (97.42%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHI+PSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHISPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLG+A+ETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGIAAETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+DLSSKPNED 
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDLSSKPNEDT 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH KGS +AENFNPESEDQPLI SRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHIKGSENAENFNPESEDQPLI-SRPPVPRRTSWLSCCGLCDVFTSSN 232

[Close]

BLAST of Carg15381 vs. ExPASy TrEMBL
Match: A0A6J1EG81 (uncharacterized protein LOC111433088 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433088 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 220/233 (94.42%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINPSS ASQGNEDVKNR+DKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINPSSIASQGNEDVKNRSDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPE     I
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPE-----I 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+D SSKPNEDR
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDPSSKPNEDR 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH+KGS SAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHSKGSESAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 228

[Close]

BLAST of Carg15381 vs. ExPASy TrEMBL
Match: A0A6J1ILZ1 (uncharacterized protein LOC111478620 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478620 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.8e-104
Identity = 217/233 (93.13%), Postives = 222/233 (95.28%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHI+PSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHISPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLDEKI 120
           PFGKGNKEVEESSSSNSGTNQKLG+A+ETKNGTLQNHSSSSSDDESVDTTKEPE     I
Sbjct: 61  PFGKGNKEVEESSSSNSGTNQKLGIAAETKNGTLQNHSSSSSDDESVDTTKEPE-----I 120

Query: 121 APTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMITSEKLSLTAPKDLSSKPNEDR 180
           APTAASIVNSVTPEVSASEETIGVVESASV NTAIPDMITSEKLSLTAP+DLSSKPNED 
Sbjct: 121 APTAASIVNSVTPEVSASEETIGVVESASVENTAIPDMITSEKLSLTAPRDLSSKPNEDT 180

Query: 181 NLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCCGLCDVFTSSN 234
           NLH SAH KGS +AENFNPESEDQPLI SRPPVPRRTSWLSCCGLCDVFTSSN
Sbjct: 181 NLHLSAHIKGSENAENFNPESEDQPLI-SRPPVPRRTSWLSCCGLCDVFTSSN 227

[Close]

BLAST of Carg15381 vs. ExPASy TrEMBL
Match: A0A0A0KHZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521020 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.7e-78
Identity = 180/267 (67.42%), Postives = 205/267 (76.78%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKAAKKKKELEAHINP    SQG +D KN++DKGSDSGE++SPAS+N PSHSN
Sbjct: 1   MPSGAKKRKAAKKKKELEAHINP----SQGKDDAKNQDDKGSDSGEIDSPASQNHPSHSN 60

Query: 61  PFGKGNKEVEESSS------SNSGTNQKLGLASETKNGTLQN----------HSSSSSDD 120
           PFG+GNKE++ESSS      SN GTNQK+ L+SE KNG ++N          HSSSSSDD
Sbjct: 61  PFGEGNKEIQESSSSDAGVPSNVGTNQKVKLSSERKNGNVENESVKGSRDDDHSSSSSDD 120

Query: 121 ESVDTTKEPEVLDEK----IAPTAASIVNSVTPEVSASEETIGVVESASVGNTAIPDMIT 180
           ESVDTTK+PEVLD K    + PTAASI+NS+TPE+SASEETI + ESASV NTAIPDMI 
Sbjct: 121 ESVDTTKKPEVLDGKTDDLVVPTAASILNSITPELSASEETISIAESASVENTAIPDMIV 180

Query: 181 SEKLSLT--------------APKDLSSKPNEDRNLHSSAHNKGSGSAENFNPESEDQPL 234
           S+KL  T              AP+D SSKPNEDRNLH SAH + S  AEN  PESEDQPL
Sbjct: 181 SKKLETTPFHSADGVTNVPVEAPRDPSSKPNEDRNLHISAHVENSECAENSKPESEDQPL 240

[Close]

BLAST of Carg15381 vs. TAIR 10
Match: AT1G29530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10
Identity = 82/250 (32.80%), Postives = 120/250 (48.00%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSSNASQGNEDVKNRNDKGSDSGEVESPASENQPSHSN 60
           MPSGAKKRKA KKKK+ EA I  S N   GN++  +++ +GSDS  + SP S+     + 
Sbjct: 1   MPSGAKKRKALKKKKQQEA-IGTSIN---GNDEHGSQDGRGSDS-SLSSPGSQG----NQ 60

Query: 61  PFGKGNKEVEESSSSNSGTNQKL--------GLASETKNGTLQNHSSSSSDDESVDTTKE 120
            FG  +     SS+   G ++++        GL  +T N  ++  ++SSSD+    T   
Sbjct: 61  EFGTKDSSALLSSAVVKGASKEISRDAGVTQGLGPKTGNAIVEKSTNSSSDNR---TRPA 120

Query: 121 PEVLDEKIAPTAASIVNSVTPEVSASE----ETIGVVESASVGNTAIPDMITSEKLSLTA 180
             V           +V+SV P VS S+    E  G+VE+++  N        SEK     
Sbjct: 121 KNVACGNSVTEITPVVDSVKPVVSISKTVTSEKSGLVETSTHSNLV---KKKSEKDEEYH 180

Query: 181 PKDLSSKPNE-----DRNLHSSAHNKGSGSAENFNPESEDQPLIVSRPPVPRRTSWLSCC 234
           P  +    N       R+   ++    S          E++PL++  PPV RRTSWLSCC
Sbjct: 181 PSPVLENNNSKVVMLPRSAPETSKKVESVRKSEVPVSPEEKPLLLPGPPVVRRTSWLSCC 235

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BLAST of Carg15381 vs. TAIR 10
Match: AT4G18070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 5.4e-05
Identity = 83/287 (28.92%), Postives = 122/287 (42.51%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSS---NASQGNEDVKNRNDKGSDSGEVESPASENQPS 60
           MPSGAKKRKAAKKK+E E     SS   N    N D +++ DK SD G V         S
Sbjct: 1   MPSGAKKRKAAKKKQEEEQQQQGSSTLINLKSNNHDSRSQGDKESDDG-VNERIEITDSS 60

Query: 61  HSNPFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLD 120
           H +         ++SSSS+S ++               + SSSSSDDES +  K  +  D
Sbjct: 61  HDH---------DKSSSSSSSSS--------------SSSSSSSSDDESREVKKIDD--D 120

Query: 121 EKIAPTAASIVN-SVTP----EVSASEETIGVVESASVGNTAIPD--------------- 180
           +K     + ++  S  P     ++A    +G   +A V NT + D               
Sbjct: 121 KKTGDDVSEVITVSSVPIQPVPIAADAPFMGFTANAIVENTGLMDSAVPNDPESGELVEI 180

Query: 181 -----MITSEKLSLTAPK------DLSSKPNEDRNLHSSA------HNKGSGS---AENF 234
                ++++E    + PK      +++   +E R   S A       N+G  S     N 
Sbjct: 181 SHVDTIVSNEADDNSLPKATEIAAEVALAFDEIRQTSSGATDSDVKENEGKTSPLPESNG 240

[Close]

BLAST of Carg15381 vs. TAIR 10
Match: AT4G18070.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 5.4e-05
Identity = 83/287 (28.92%), Postives = 122/287 (42.51%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSS---NASQGNEDVKNRNDKGSDSGEVESPASENQPS 60
           MPSGAKKRKAAKKK+E E     SS   N    N D +++ DK SD G V         S
Sbjct: 1   MPSGAKKRKAAKKKQEEEQQQQGSSTLINLKSNNHDSRSQGDKESDDG-VNERIEITDSS 60

Query: 61  HSNPFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLD 120
           H +         ++SSSS+S ++               + SSSSSDDES +  K  +  D
Sbjct: 61  HDH---------DKSSSSSSSSS--------------SSSSSSSSDDESREVKKIDD--D 120

Query: 121 EKIAPTAASIVN-SVTP----EVSASEETIGVVESASVGNTAIPD--------------- 180
           +K     + ++  S  P     ++A    +G   +A V NT + D               
Sbjct: 121 KKTGDDVSEVITVSSVPIQPVPIAADAPFMGFTANAIVENTGLMDSAVPNDPESGELVEI 180

Query: 181 -----MITSEKLSLTAPK------DLSSKPNEDRNLHSSA------HNKGSGS---AENF 234
                ++++E    + PK      +++   +E R   S A       N+G  S     N 
Sbjct: 181 SHVDTIVSNEADDNSLPKATEIAAEVALAFDEIRQTSSGATDSDVKENEGKTSPLPESNG 240

[Close]

BLAST of Carg15381 vs. TAIR 10
Match: AT4G18070.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 5.4e-05
Identity = 83/287 (28.92%), Postives = 122/287 (42.51%), Query Frame = 0


Query: 1   MPSGAKKRKAAKKKKELEAHINPSS---NASQGNEDVKNRNDKGSDSGEVESPASENQPS 60
           MPSGAKKRKAAKKK+E E     SS   N    N D +++ DK SD G V         S
Sbjct: 1   MPSGAKKRKAAKKKQEEEQQQQGSSTLINLKSNNHDSRSQGDKESDDG-VNERIEITDSS 60

Query: 61  HSNPFGKGNKEVEESSSSNSGTNQKLGLASETKNGTLQNHSSSSSDDESVDTTKEPEVLD 120
           H +         ++SSSS+S ++               + SSSSSDDES +  K  +  D
Sbjct: 61  HDH---------DKSSSSSSSSS--------------SSSSSSSSDDESREVKKIDD--D 120

Query: 121 EKIAPTAASIVN-SVTP----EVSASEETIGVVESASVGNTAIPD--------------- 180
           +K     + ++  S  P     ++A    +G   +A V NT + D               
Sbjct: 121 KKTGDDVSEVITVSSVPIQPVPIAADAPFMGFTANAIVENTGLMDSAVPNDPESGELVEI 180

Query: 181 -----MITSEKLSLTAPK------DLSSKPNEDRNLHSSA------HNKGSGS---AENF 234
                ++++E    + PK      +++   +E R   S A       N+G  S     N 
Sbjct: 181 SHVDTIVSNEADDNSLPKATEIAAEVALAFDEIRQTSSGATDSDVKENEGKTSPLPESNG 240

The following BLAST results are available for this feature:

BLAST of Carg15381 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034681.1	4.2e-116	100.00	hypothetical protein SDJN02_04411 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023543820.1	2.0e-110	96.57	uncharacterized protein LOC111803573 [Cucurbita pepo subsp. pepo]	[more]
XP_022925782.1	3.4e-110	96.57	nucleolin 2-like isoform X1 [Cucurbita moschata]	[more]
XP_022978756.1	5.5e-108	95.28	uncharacterized protein LOC111478620 isoform X1 [Cucurbita maxima]	[more]
XP_022925783.1	1.5e-105	94.42	uncharacterized protein LOC111433088 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg15381 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECK7	1.7e-110	96.57	nucleolin 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433088 PE=4 S...	[more]
A0A6J1INX3	2.6e-108	95.28	uncharacterized protein LOC111478620 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EG81	7.2e-106	94.42	uncharacterized protein LOC111433088 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ILZ1	8.8e-104	93.13	uncharacterized protein LOC111478620 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KHZ9	3.7e-78	67.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521020 PE=4 SV=1	[more]

BLAST of Carg15381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29530.1	4.3e-10	32.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18070.1	5.4e-05	28.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18070.3	5.4e-05	28.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18070.4	5.4e-05	28.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..211
None	No IPR available	PANTHER	PTHR37187:SF7	EXPRESSED PROTEIN	coord: 1..85
None	No IPR available	PANTHER	PTHR37187	EXPRESSED PROTEIN	coord: 1..85 coord: 88..233
None	No IPR available	PANTHER	PTHR37187:SF7	EXPRESSED PROTEIN	coord: 88..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15381-RA	Carg15381-RA	mRNA