Carg15372 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTTGAACCTCTTGTTTTTATTCAGGAGGGCTTTCAGAGACGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTTCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATAGTTACAGAATATTTGCCAAAGGTTTTTCCAATCACATAATGTTGCAAAATAGAGAGACATACTTTAATCTAAAGCTTGGTTTTATTTCAGTTGGAACCTTGATTGAATTTTGTTTTCTTCTGTTTTTGATACAGGGAGATCTTGCAGCATTATTGGGCAGAAAAGGAACACTAAAAACCATGACCGTTGTGAGACTTGCCCTTCATATTGCAAGGTCTATCTCTCAACTGAACGAGTTGATCCGAACTATTATTCTTTTTAAGCTTAATTTGAGCTGCTAATACATAATTATGATCTAGAATGCAGTTACTGTTATTAGGAATAGAGTAGTATGTCATATTGCAATAGGATGGATTTTAGTTTTCTTTAGGCTTCATATCCTTTTGAAGGAAATCGTAAGTAGAGTTTTGAAGTGATATGAAGGATCCTCAGAAATATAACAATTATAGAATTGAGTGAGCTGTTGAGGAATTTTTCTACTTATAATAAATCATTGGAAACCAAGCTGTAAATTATGTTATGGAGAAGAAAGATCTTATAGTTAATCTGTTCAGTTCTGGTTAATGATTTTCAATATCGATACATTCTACAATTCCAACGGTTAATTTTCTTGCTGTTCTGTTGAGAATGTGTTCCCTGTATCGTCATCTTTTCTTTAAATTCACTTTTCCACCTGTCTTGGCAAAATATTCAGGGGGATGAATTATTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTGATCTTGAGCCTTCGTAAGCATTCCTGTACAATAACTCATATATCCTTGGGATTTTTGTTCTTTGTTTTTAACTCTCACAAGTGCTGAGTACACGTAGCATTCTTTGTTGAACTTAAGAATATAAATTCTTCACCAAATTTCTGAATCCGATGACAGTTTTTAATATTGCTTTGATCAAGATTTCAGAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCGGACTTTGGAGTTAGCAAGTTATTGACGGTTAAAGAAGATAAACCTTTGACCTGTTCAGAGACTTCACGTGAGTCTCCTCTGTCTTGAATTCTGATCTACAAACTTTTTACAATGGTTCATACCCAAGAAAACAGTAATTTTAGTACTCTTTTGAAATAGAATATATGGTTCATTGATACAATAACTCTTCCCATTCTGCACTGATGCATCAGCCCTTACTCGTCATCAAGTCAAATGACGCATGATATTGATTGCTGAAAACTCAGGTTTAGTTTTTCTTTTTATCTAATATTATAGGGAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTATTTTCATTTGCTTTGATTTTACAAGAGGTATACATACCTGTCTTTAATTTGTTTTATGTTATGTATTATCAGGCAAATCCTTTTTCTGGGATTCTTCATATTGTGGTTGCTCCTGTTTGTCTCTGAATTTAGAGAATGGTGGCTCTTTGTTGACGCAGCATTGAATGATTTAGAAAACTGTTGAAATGAGTAAAGTCTTTCTTGTTTATAAACTACATAGCATTTCCACACTGACCTCATGAAGGTTGGTTTCGTGGAACCGTTGTGTTCTTATGCAATGAGCAATTAGATGCTTATTTGATAAACAATTTTTTCTTCAATCCTTTTATGACATTATGACCATGAAAGATTTAAGGGGAATATGGTTGAGCATATAAATCCTTTGAAGCATAGGCAGTTTCCAAACTAAGCTTTCTGATCGACAGTTTGAATTCTGATATTAGTGATTTGCTATAATCCAGATGATTGAAGGCTGTCCTCCATTTCCCGACAAGCGAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGTGAACGTCCACCATTTAAAGCACCACTTAAACGTTATGCAAACGGACTAAAAGAGTGAGTTCTATCTACCCAAGCTAATTGATTTAAATTTATTATGAGCAATGGTAAATTTCTAGTTTGTTTCTTATTTTGTTTTAAAATTTTAAAATCAGGGGTTGAAAAGCTCTTGGGTTTTTAGTGTATCATATTTGTAAATGTGGTTCTTTCTTATCGATTATGTTTTTTAGTCTCTCCTGAATTGTCATCATCGCAAGTCTCATTTGTTTAAAAAAGAAGATAATATGCACGTCGTGAAGCTAGCTGGTTCTCATAGCTATCATGCACTCAGAAATATTCCACGATTCTTCTCACTTCCAAGTTGGCATCAGAGCCAAATCAATTCTCCTGTAATTCATATATTCATTTTGTCGAAGTTAAAATAATTTGTTTGCAGGCTAATTGAAGAATGCTGGAATGAGAAGCCAACTAAAAGACCTACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAATAGATTCGGTCATAAGAGGCGCTGGAAGGTATAGTTCATGGCCTCTGCCTTTTCTTGTCTCCCTACCCCTAGAATTGTTTTAGTGCATAATCTTTTTGAAGATGCAGACATCCACTAGAAAGATAAGCCATATACTTGTTCACGTGGCTCTATATTTTTGTTGATTTTCTGATTGAAGATTTACTGGAATAAATATGAATTTTAAGGAAGTTTATTTTTGGCTTCAACATACATACAGGTCAGGCCATTGAAATTCTTCCAGAATATTGAGGCGATGTTGAAGAAAGATCGTTCCCGTCAAAACAGTTTGAATCTATCAACACATTCTTCTGCCAGCAGTATATGA ATGGCACTTGAACCTCTTGTTTTTATTCAGGAGGGCTTTCAGAGACGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTTCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATAGTTACAGAATATTTGCCAAAGTTGGAACCTTGATTGAATTTTGTTTTCTTCTGTTTTTGATACAGGGAGATCTTGCAGCATTATTGGGCAGAAAAGGAACACTAAAAACCATGACCGTTGTGAGACTTGCCCTTCATATTGCAAGGGGGATGAATTATTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTGATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCGGACTTTGGAGTTAGCAAGTTATTGACGGTTAAAGAAGATAAACCTTTGACCTGTTCAGAGACTTCACGGAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTATTTTCATTTGCTTTGATTTTACAAGAGATGATTGAAGGCTGTCCTCCATTTCCCGACAAGCGAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGTGAACGTCCACCATTTAAAGCACCACTTAAACGTTATGCAAACGGACTAAAAGAGCTAATTGAAGAATGCTGGAATGAGAAGCCAACTAAAAGACCTACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAATAGATTCGGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATTCTTCCAGAATATTGAGGCGATGTTGAAGAAAGATCGTTCCCGTCAAAACAGTTTGAATCTATCAACACATTCTTCTGCCAGCAGTATATGA ATGGCACTTGAACCTCTTGTTTTTATTCAGGAGGGCTTTCAGAGACGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTTCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATAGTTACAGAATATTTGCCAAAGTTGGAACCTTGATTGAATTTTGTTTTCTTCTGTTTTTGATACAGGGAGATCTTGCAGCATTATTGGGCAGAAAAGGAACACTAAAAACCATGACCGTTGTGAGACTTGCCCTTCATATTGCAAGGGGGATGAATTATTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTGATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCGGACTTTGGAGTTAGCAAGTTATTGACGGTTAAAGAAGATAAACCTTTGACCTGTTCAGAGACTTCACGGAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTATTTTCATTTGCTTTGATTTTACAAGAGATGATTGAAGGCTGTCCTCCATTTCCCGACAAGCGAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGTGAACGTCCACCATTTAAAGCACCACTTAAACGTTATGCAAACGGACTAAAAGAGCTAATTGAAGAATGCTGGAATGAGAAGCCAACTAAAAGACCTACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAATAGATTCGGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATTCTTCCAGAATATTGAGGCGATGTTGAAGAAAGATCGTTCCCGTCAAAACAGTTTGAATCTATCAACACATTCTTCTGCCAGCAGTATATGA MALEPLVFIQEGFQRRACIASENTTPQCCSVSRCCYSKLADDDSYRIFAKVGTLIEFCFLLFLIQGDLAALLGRKGTLKTMTVVRLALHIARGMNYLHENKPAPIIHRDLEPSNILRDDSGHLKVADFGVSKLLTVKEDKPLTCSETSRRYEAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFPDKRDSEVPKLYAAGERPPFKAPLKRYANGLKELIEECWNEKPTKRPTFRQIITQLEFIYNRFGHKRRWKVRPLKFFQNIEAMLKKDRSRQNSLNLSTHSSASSI Homology
BLAST of Carg15372 vs. NCBI nr
Match: KAG7034672.1 (Serine/threonine-protein kinase STY17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 587.8 bits (1514), Expect = 5.1e-164 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Carg15372 vs. NCBI nr
Match: XP_022925700.1 (integrin-linked protein kinase 1-like [Cucurbita moschata] >XP_023544247.1 integrin-linked protein kinase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 457.6 bits (1176), Expect = 8.0e-125 Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0
BLAST of Carg15372 vs. NCBI nr
Match: KAG6581387.1 (Integrin-linked protein kinase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 452.6 bits (1163), Expect = 2.6e-123 Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0
BLAST of Carg15372 vs. NCBI nr
Match: XP_022978698.1 (integrin-linked protein kinase 1-like [Cucurbita maxima]) HSP 1 Score: 451.8 bits (1161), Expect = 4.4e-123 Identity = 223/229 (97.38%), Postives = 227/229 (99.13%), Query Frame = 0
BLAST of Carg15372 vs. NCBI nr
Match: XP_038882566.1 (integrin-linked protein kinase 1-like [Benincasa hispida]) HSP 1 Score: 414.1 bits (1063), Expect = 1.0e-111 Identity = 204/229 (89.08%), Postives = 214/229 (93.45%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy Swiss-Prot
Match: F4IS56 (Integrin-linked protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=ILK1 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.5e-38 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy Swiss-Prot
Match: Q8RWL6 (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26 Identity = 76/212 (35.85%), Postives = 122/212 (57.55%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy Swiss-Prot
Match: O22558 (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2) HSP 1 Score: 116.7 bits (291), Expect = 4.4e-25 Identity = 69/185 (37.30%), Postives = 112/185 (60.54%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy Swiss-Prot
Match: Q2MHE4 (Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.7e-24 Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy Swiss-Prot
Match: Q54N73 (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum OX=44689 GN=7tmk1 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.1e-23 Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy TrEMBL
Match: A0A6J1EIY2 (integrin-linked protein kinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433038 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.9e-125 Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy TrEMBL
Match: A0A6J1IU02 (integrin-linked protein kinase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478579 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 2.1e-123 Identity = 223/229 (97.38%), Postives = 227/229 (99.13%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy TrEMBL
Match: A0A6J1CMS7 (serine/threonine-protein kinase STY17-like OS=Momordica charantia OX=3673 GN=LOC111012399 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.3e-108 Identity = 202/244 (82.79%), Postives = 218/244 (89.34%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy TrEMBL
Match: A0A5A7UGF8 (Serine/threonine-protein kinase HT1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008510 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 5.6e-108 Identity = 201/230 (87.39%), Postives = 213/230 (92.61%), Query Frame = 0
BLAST of Carg15372 vs. ExPASy TrEMBL
Match: A0A0A0KID6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520410 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.6e-107 Identity = 199/227 (87.67%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of Carg15372 vs. TAIR 10
Match: AT4G18950.1 (Integrin-linked protein kinase family ) HSP 1 Score: 290.4 bits (742), Expect = 1.6e-78 Identity = 149/228 (65.35%), Postives = 173/228 (75.88%), Query Frame = 0
BLAST of Carg15372 vs. TAIR 10
Match: AT3G58760.1 (Integrin-linked protein kinase family ) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68 Identity = 136/229 (59.39%), Postives = 160/229 (69.87%), Query Frame = 0
BLAST of Carg15372 vs. TAIR 10
Match: AT2G31800.1 (Integrin-linked protein kinase family ) HSP 1 Score: 165.2 bits (417), Expect = 7.6e-41 Identity = 90/197 (45.69%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of Carg15372 vs. TAIR 10
Match: AT2G43850.1 (Integrin-linked protein kinase family ) HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
BLAST of Carg15372 vs. TAIR 10
Match: AT2G43850.2 (Integrin-linked protein kinase family ) HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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