Carg15185 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15185
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MAR-binding filament-like protein 1-1 isoform 2
Location	Carg_Chr10: 1567166 .. 1570558 (+)
RNA-Seq Expression	Carg15185
Synteny	Carg15185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATAAGTGAGGTCTCCTGGAAATGGATAAGGTGAGCCATGAACCCATCGTCCGTTGTATCCTCATGAACGGGCTTCGGCCACTGCAGCTTCGAAGGTTCACATGCTTCCTATTCTTCCTTCTGCAACTGGTTTGATTGATTTTCTGAAATCTCTGTAATCTTAGCGATTTGAGCTGTTATTACTCTTCTACGGATACGTGATTAAGTTTTCCGGTTTCTGGTCATAAAACAGCCAATCGGTGCGGATATGTTTACGACACTGCTTCATCTCATCCTTGTCTCGTCTTCCATCACTTCGATTTTTTGATGCTCGAAACTGTTAGGTTTTCGTTAATTTACTGATTTTTGGAAGGTTTTCATGCGGGGAATGATGCAGGAATGGCTATTTTTATACATGGATGCTCCACTTCCAGATTTTTCTGTGAAAGGGAGGGGACCTTGTCTTTAGGCGTTTCGGCTGCTTCAGCTTTGCCGCAGAGAGCGAGAGTGTACGGACATTTTGCGAGAGTTTACGGACATTTTGCGAGAGGTTAGTCAATTTTAGTCGTCGTCTACTTGAGTATGTAATAATTGGGGACTGTTTATGATGAGATATTTCATACATAAACTAACAAGTTCTTGAAATTATGAAATGGTTAGTTTGCTTGTATTTTTCGTGGTATTAATTTGAAATTTTCACTAAGTTGATCAGCATGTAATCCAGATAGGAAAATTGAAAACTAGTCACATCCTTTATAGTATATTTTGGGGCATTTTAACTCTAGCAGATGTAAACATGATTTTGGTGACCGGTCGTACGCCTTGTATTGATACAACAAGAATAGTAAAGTTCTATCTAATATGAAAGCAACTAGAAGGGGTTTGAAACGGGCATGGACAACACGTCTTGGACAAACATAATCGAGACACTCGACATGCGGTCACAGGCAACATGCCTTGGACAAACATGACCGGTGAAGGTGCACTATTTCATTCGTAGAAAGTTTGTTAAAAGCTCATATTTTCTCTTCACGAGTTTTTTTTAGAAGGTTAGATTCTATGCCTCTGTTTCTTTGTCCCAACGATCATTACTTTCACTGTTCTTATTCTGGTTAAGGCTCTTAAGAGCTAGAAAGATTGCTGCCTATGCTGCTTTCTACTCATGGTTCCTCCCAAAATTGAATTCTTGATCACTTCCAGCCTTAAAAATGAGATGCGAACCAAGCAAATACTGGCTCTTTCTTATGAAATGCCATGGGCTACTAGAGCTTAGCATATTTTGGAGAGTTATAAAATGCGTTGCTAGTGTAATTTTATTAGACGAATAAAACCATAACTGTTGCAAGGTTATTTCAAGTTGATTGTGATCAGTTAAGTTGATTTGCCATAAGAGTCCATTCATTTATCATATGATTACTATATCTTCTTCTTCAGAGACAAGAACTAGTCGGCAGTTGTCAAAAAAGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTTGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGATCCTACAAATAAATCCGAGGCAAGGAAAATATCGGTCGTGATTTCTTTTTTCTCCATTCCAATGAATCTTCTATATATTGTCTGCCTCTTTAGTAGATGGTGAATGCAGTTATAGAAATGCTTATTGTGATTTTATCGGTCGGAGGGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACTTCTTCCTAGCATATTCATTTATTCGTGAGGCTGATGGCAATACGCAACGAGCCAAAGTAGACAATATTTGTTAGTGGTGGGCTTGGGACTGTTATAAATGTCATAGCTAGACAACGGGTGGTGTGCTAGCGAGAATGCTGGCCCCAAGGGAGATAGATTGTGAGATCTTACGTCAGTTGGAGAGGGGAACGAAATATTCCTTATAAGGGTGTGGAAACCTCTCAATAATATATGGGTTTAAAAACTGTGAGGCTGACGGCAAAACGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTAGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGATATCGGGCTGTGTGTCAATGAAGACATTGGGCCCCCAAGGGGAGTGGATTGTGAGATCCCACGTCGGTTGGAAAGGAGAAAGAAGCATTCCTTATAAAGGTATGGAAACCTCTCAATAATATATGTGTTTAAAAACTGTGAGGCTGACGGCAAAACTTAACGGGCCAAAGCGAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTGGATATCGGACGGTGTGCCAATGAGGATGTTGGGCCCCCAAGGGGGGTGTATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGAAAAACTCCCCCTAGTTGACGTGTTTCAAAACCGTGGGGTTGACGGCGATACATAACGAGCTAAAGTGGACAACATCCGCTAGCAACCGGCTTGAACTGTTACAATTAATCCCTATTTGTTTCTCGTGCAGCAAACACCTTTTGGCTACACGAGGAAGGATGTTTTATTAATTGGTTTGGGTGTCACAGTTCTTGGATTTGGACTGAAAAGTGGATTAGAGGTTAGATATGTCACTTTCCCTTTAATAACTGATTGTTCCTCCCGCAAGCAATCATTGGTTTCTGGCTATTTGTTCATACTACAAGCTGAGGAGAAAGGGTTTTTATATTCATTTCCACAATTACCCTTAGCATTTTACCTTTTCTTCTGCAGTTTGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGGTAAGGACCACTCCCTACTCGAAATCATCGTCATGTTTGAGAGTGATTTAAATCACGTTTGAAAAAAAGTGGAATGTTTTTTTACCTTATCAACGTACCTATCAATTTGATGTTTGTAGAAACGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAAAAGAGCCCATCAACTAGCGGCAAATAGGTTAAACAAAATTTGGGGCCTTCGAGCATGGTTGACTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCTGTCTATTGGCACGACTAAGTTTAGGGCGTAGCTCTGATACCATGTTAAACAAACACGACTCTCCAAAATGGTATGATATTGTCCACTTTGAGTACAAGCTCTTATGACTTTGATTTAGGCTTCCCCTAAAGGCCTCAGAGTATTCTTTGATTATAAATCCATAAACATTCTCTA

mRNA sequence

AATTTATAAGTGAGGTCTCCTGGAAATGGATAAGGTGAGCCATGAACCCATCGTCCGTTGTATCCTCATGAACGGGCTTCGGCCACTGCAGCTTCGAAGATTTTTCTGTGAAAGGGAGGGGACCTTGTCTTTAGGCGTTTCGGCTGCTTCAGCTTTGCCGCAGAGAGCGAGAGTGTACGGACATTTTGCGAGAGTTTACGGACATTTTGCGAGAGAGACAAGAACTAGTCGGCAGTTGTCAAAAAAGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTTGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGATCCTACAAATAAATCCGAGGCAAGGAAAATATCGGTCTTTGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAACGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAAAAGAGCCCATCAACTAGCGGCAAATAGGTTAAACAAAATTTGGGGCCTTCGAGCATGGTTGACTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCTGTCTATTGGCACGACTAAGTTTAGGGCGTAGCTCTGATACCATGTTAAACAAACACGACTCTCCAAAATGGTATGATATTGTCCACTTTGAGTACAAGCTCTTATGACTTTGATTTAGGCTTCCCCTAAAGGCCTCAGAGTATTCTTTGATTATAAATCCATAAACATTCTCTA

Coding sequence (CDS)

ATGGATAAGGTGAGCCATGAACCCATCGTCCGTTGTATCCTCATGAACGGGCTTCGGCCACTGCAGCTTCGAAGATTTTTCTGTGAAAGGGAGGGGACCTTGTCTTTAGGCGTTTCGGCTGCTTCAGCTTTGCCGCAGAGAGCGAGAGTGTACGGACATTTTGCGAGAGTTTACGGACATTTTGCGAGAGAGACAAGAACTAGTCGGCAGTTGTCAAAAAAGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTTGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGATCCTACAAATAAATCCGAGGCAAGGAAAATATCGGTCTTTGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAACGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAAAAGAGCCCATCAACTAGCGGCAAATAG

Protein sequence

MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSEARKISVFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPSTSGK

Homology

[Close]

BLAST of Carg15185 vs. NCBI nr
Match: KAG7023331.1 (hypothetical protein SDJN02_14356 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGH 60
           MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGH
Sbjct: 1   MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGH 60

Query: 61  FARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSEARKIS 120
           FARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSEARKIS
Sbjct: 61  FARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSEARKIS 120

Query: 121 VFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 180
           VFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 121 VFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 180

Query: 181 TEAELMTLLEQVDEEKSPSTSGK 204
           TEAELMTLLEQVDEEKSPSTSGK
Sbjct: 181 TEAELMTLLEQVDEEKSPSTSGK 203

[Close]

BLAST of Carg15185 vs. NCBI nr
Match: KAG6589642.1 (hypothetical protein SDJN03_15065, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77
Identity = 168/203 (82.76%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           RFFCEREGTLSLG+SAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF
Sbjct: 66  RFFCEREGTLSLGISAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 125

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           FATRKVVLTVPWDSSSSNTSSSKD+PTNKSE       RK        ++V         
Sbjct: 126 FATRKVVLTVPWDSSSSNTSSSKDEPTNKSEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 185

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            FAGYDPMQAGNVVQLVLVLGL      TYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 186 EFAGYDPMQAGNVVQLVLVLGL------TYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 245

[Close]

BLAST of Carg15185 vs. NCBI nr
Match: XP_022921999.1 (uncharacterized protein LOC111430086 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 6.1e-71
Identity = 160/205 (78.05%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 23  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRK 82
           + RFFCEREGTLSLG+ AASALPQR       A VYGHFARET TSRQLSK+EVLDFPRK
Sbjct: 10  ISRFFCEREGTLSLGIPAASALPQR-------AGVYGHFARETGTSRQLSKREVLDFPRK 69

Query: 83  GFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV------- 142
           GFFATRKVVLTVP DSSSSNTSSSKDDPT+K E       RK        ++V       
Sbjct: 70  GFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFGYTRKDVLLIGLGVTVLGFGLKS 129

Query: 143 ---FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE 202
              FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE
Sbjct: 130 GLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE 189

Query: 203 SLTEAELMTLLEQVDEEKSPSTSGK 204
           SLTEAELMTLLEQVDEEKS STSGK
Sbjct: 190 SLTEAELMTLLEQVDEEKSQSTSGK 207

[Close]

BLAST of Carg15185 vs. NCBI nr
Match: XP_038880733.1 (uncharacterized protein LOC120072335 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65
Identity = 149/203 (73.40%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R FCEREGTL LG+SAA  LPQR       ARVYGHFARE  TSR+LSKKE LDFPRKGF
Sbjct: 12  RIFCEREGTLFLGISAAPVLPQR-------ARVYGHFARERGTSRRLSKKEQLDFPRKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           FATRKVVLTVP DSSSSNTS+SK+DPTN+SE       RK        ++V         
Sbjct: 72  FATRKVVLTVPRDSSSSNTSTSKEDPTNQSERTPFGYTRKDVLLIGLGVTVLGFGLKTGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 132 EYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 191

[Close]

BLAST of Carg15185 vs. NCBI nr
Match: XP_004137355.1 (uncharacterized protein LOC101203378 [Cucumis sativus] >KGN63888.1 hypothetical protein Csa_014159 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-61
Identity = 143/203 (70.44%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R F EREGTL LG+SAA  LPQ        ARVYGHFARE  TSR+LSKKE +DFPRKGF
Sbjct: 12  RIFSEREGTLFLGISAAPVLPQS-------ARVYGHFARERGTSRRLSKKEQIDFPRKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           F TRKVVLTVP DSSSSNTSSS DD TN++E       RK        ++V         
Sbjct: 72  FGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 132 EYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 191

[Close]

BLAST of Carg15185 vs. ExPASy TrEMBL
Match: A0A6J1E245 (uncharacterized protein LOC111430086 OS=Cucurbita moschata OX=3662 GN=LOC111430086 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.9e-71
Identity = 160/205 (78.05%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 23  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRK 82
           + RFFCEREGTLSLG+ AASALPQR       A VYGHFARET TSRQLSK+EVLDFPRK
Sbjct: 10  ISRFFCEREGTLSLGIPAASALPQR-------AGVYGHFARETGTSRQLSKREVLDFPRK 69

Query: 83  GFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV------- 142
           GFFATRKVVLTVP DSSSSNTSSSKDDPT+K E       RK        ++V       
Sbjct: 70  GFFATRKVVLTVPRDSSSSNTSSSKDDPTSKPEQTPFGYTRKDVLLIGLGVTVLGFGLKS 129

Query: 143 ---FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE 202
              FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE
Sbjct: 130 GLEFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLE 189

Query: 203 SLTEAELMTLLEQVDEEKSPSTSGK 204
           SLTEAELMTLLEQVDEEKS STSGK
Sbjct: 190 SLTEAELMTLLEQVDEEKSQSTSGK 207

[Close]

BLAST of Carg15185 vs. ExPASy TrEMBL
Match: A0A0A0LPZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025200 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.8e-61
Identity = 143/203 (70.44%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R F EREGTL LG+SAA  LPQ        ARVYGHFARE  TSR+LSKKE +DFPRKGF
Sbjct: 12  RIFSEREGTLFLGISAAPVLPQS-------ARVYGHFARERGTSRRLSKKEQIDFPRKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           F TRKVVLTVP DSSSSNTSSS DD TN++E       RK        ++V         
Sbjct: 72  FGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 132 EYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 191

[Close]

BLAST of Carg15185 vs. ExPASy TrEMBL
Match: A0A1S3BX71 (uncharacterized protein LOC103494194 OS=Cucumis melo OX=3656 GN=LOC103494194 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.1e-61
Identity = 144/203 (70.94%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R F EREGTL LG+SAA  LPQ        ARVYG FARE  TSR+LSKKE LDFPRKGF
Sbjct: 12  RIFSEREGTLFLGISAAPVLPQS-------ARVYGQFARERGTSRRLSKKEQLDFPRKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           FATRKVVLTVP DSSSSNTSSS +DPTN+SE       RK        ++V         
Sbjct: 72  FATRKVVLTVPKDSSSSNTSSSNEDPTNQSEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            +AGYD MQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL
Sbjct: 132 EYAGYDSMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 191

[Close]

BLAST of Carg15185 vs. ExPASy TrEMBL
Match: A0A6J1EFX7 (uncharacterized protein LOC111433018 OS=Cucurbita moschata OX=3662 GN=LOC111433018 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.8e-60
Identity = 138/203 (67.98%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R FCEREGTL LG SAA  LPQR       ARVYGHFARE  +S +LSKKE +DFP KGF
Sbjct: 12  RIFCEREGTLFLGFSAAPVLPQR-------ARVYGHFARERGSSERLSKKERIDFPTKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           F T++VV+TVP DSSSSNTSSS+DDPTN+S+       RK        ++V         
Sbjct: 72  FGTKRVVVTVPRDSSSSNTSSSEDDPTNQSKQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            FAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESL
Sbjct: 132 EFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYEDKVMEKRLESL 191

[Close]

BLAST of Carg15185 vs. ExPASy TrEMBL
Match: A0A6J1IDW5 (uncharacterized protein LOC111471752 OS=Cucurbita maxima OX=3661 GN=LOC111471752 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.6e-59
Identity = 138/203 (67.98%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 25  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGF 84
           R FCEREGTL LG SAA  LPQR       ARVY HFARE  +S++LSKKE +DFP KGF
Sbjct: 12  RIFCEREGTLFLGFSAAPVLPQR-------ARVYRHFARERGSSQRLSKKEPIDFPTKGF 71

Query: 85  FATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK--------ISV--------- 144
           F T+KVVLTVP DSSSSN SSS+DDPTN+S+       RK        ++V         
Sbjct: 72  FGTKKVVLTVPRDSSSSNASSSEDDPTNQSKQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 131

Query: 145 -FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 204
            FAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESL
Sbjct: 132 EFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYEDKVMEKRLESL 191

[Close]

BLAST of Carg15185 vs. TAIR 10
Match: AT3G17930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 122 FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLT 181
           + G DP+QAGN VQL+LVLGLTLGWISTY+FRV +K+MTYAQQLRDYE +VMQKRLESL+
Sbjct: 112 YVGVDPLQAGNAVQLILVLGLTLGWISTYIFRVGNKEMTYAQQLRDYESQVMQKRLESLS 171

Query: 182 EAELMTLLEQVDEEKS 198
           EAEL  L+ QVDEEK+
Sbjct: 172 EAELEALMAQVDEEKT 187

The following BLAST results are available for this feature:

BLAST of Carg15185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023331.1	3.4e-106	100.00	hypothetical protein SDJN02_14356 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589642.1	2.5e-77	82.76	hypothetical protein SDJN03_15065, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022921999.1	6.1e-71	78.05	uncharacterized protein LOC111430086 [Cucurbita moschata]	[more]
XP_038880733.1	2.9e-65	73.40	uncharacterized protein LOC120072335 [Benincasa hispida]	[more]
XP_004137355.1	5.7e-61	70.44	uncharacterized protein LOC101203378 [Cucumis sativus] >KGN63888.1 hypothetical ...	[more]

BLAST of Carg15185 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg15185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E245	2.9e-71	78.05	uncharacterized protein LOC111430086 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A0A0LPZ9	2.8e-61	70.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025200 PE=4 SV=1	[more]
A0A1S3BX71	6.1e-61	70.94	uncharacterized protein LOC103494194 OS=Cucumis melo OX=3656 GN=LOC103494194 PE=...	[more]
A0A6J1EFX7	6.8e-60	67.98	uncharacterized protein LOC111433018 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IDW5	2.6e-59	67.98	uncharacterized protein LOC111471752 OS=Cucurbita maxima OX=3661 GN=LOC111471752...	[more]

BLAST of Carg15185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17930.1	7.5e-27	76.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021562	Protein of unknown function DUF3007	PFAM	PF11460	DUF3007	coord: 122..193 e-value: 3.0E-24 score: 85.1
IPR021562	Protein of unknown function DUF3007	PANTHER	PTHR35734	OS01G0805200 PROTEIN	coord: 122..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15185-RA	Carg15185-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane