Carg14979 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14979
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PSI-K
Location	Carg_Chr07: 440685 .. 441556 (-)
RNA-Seq Expression	Carg14979
Synteny	Carg14979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATAAATTAAAAATAAATTCAGTGGCTATAGCAGCAAGAAAATGGCAGCTACAATGATGACTTCGATCCCTCAGTTTTGTGGGCTGAGGCCAGCTGTTCCAGTGGCGGCTCCGGTTCGTAGCCTGGTATGTCCACGTCGCCGTCGCCTTCGCCGCCGTATCCGTCGGCATTCTTATTCTCTGTGATCGGAAATAGCTGAAATGTGTTTGATTTTGCAGGTGGCGGTGCCGCCCTTGAAGCGGAGAGGTGGCGGCGGCGCTCTCAGTGCCCGCTGCGATTTCATTGGCTCCCCCACTAATTTGGTAATCACTCTCTCAATTTCCACACTATCGAATTTTGTCGTTCCCTAAGAAGTTTAATTTTGTTTTAAAAAAATAATAGATCTGATTTCTAGTTGGGATTAATTAATAGTTTAGGATATGATAATAGAAATTGGATGTGAAAAATATATCCTATGAAATTACCAAAACAAAGAATTAAATTACCCGGTTGAAGCAAATGGCGTAAAAAAAAAAAAAGACGAATGATATGTGTACACGTGGCGTAGATAATGGTGACATCGACAAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCGAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGTGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCGTGCGGCGTCGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGGGCATTGGTTCTCTCTAAATGTTCTCTGTTTTCTTTGTTTGAATTAAAAATAACTTTTAAAAAATTCTGTATGCTTCTTTGTTGAGTATATATATATATATATATATATTATT

mRNA sequence

GAAATAAATTAAAAATAAATTCAGTGGCTATAGCAGCAAGAAAATGGCAGCTACAATGATGACTTCGATCCCTCAGTTTTGTGGGCTGAGGCCAGCTGTTCCAGTGGCGGCTCCGGTTCGTAGCCTGGTGGCGGTGCCGCCCTTGAAGCGGAGAGGTGGCGGCGGCGCTCTCAGTGCCCGCTGCGATTTCATTGGCTCCCCCACTAATTTGATAATGGTGACATCGACAAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCGAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGTGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCGTGCGGCGTCGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGGGCATTGGTTCTCTCTAAATGTTCTCTGTTTTCTTTGTTTGAATTAAAAATAACTTTTAAAAAATTCTGTATGCTTCTTTGTTGAGTATATATATATATATATATATATTATT

Coding sequence (CDS)

ATGGCAGCTACAATGATGACTTCGATCCCTCAGTTTTGTGGGCTGAGGCCAGCTGTTCCAGTGGCGGCTCCGGTTCGTAGCCTGGTGGCGGTGCCGCCCTTGAAGCGGAGAGGTGGCGGCGGCGCTCTCAGTGCCCGCTGCGATTTCATTGGCTCCCCCACTAATTTGATAATGGTGACATCGACAAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCGAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGTGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGCTTCACCCTCGCTGATACTTTGGCGTGCGGCGTCGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGGGCATTGGTTCTCTCTAA

Protein sequence

MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGLKGIGSL

Homology

[Close]

BLAST of Carg14979 vs. NCBI nr
Match: XP_022926961.1 (photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita moschata] >KAG7026437.1 Photosystem I reaction center subunit psaK, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT
Sbjct: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 131

[Close]

BLAST of Carg14979 vs. NCBI nr
Match: XP_023518883.1 (photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 4.8e-61
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRR---GGGGALSARCDFIGSPTNLI 60
           MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRR   GGGGALSARCDFIGSPTNLI
Sbjct: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGGGGALSARCDFIGSPTNLI 60

Query: 61  MVTSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHII 120
           MVTSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHII
Sbjct: 61  MVTSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHII 120

Query: 121 GVGVVLGLKGIGSL 132
           GVGVVLGLKGI SL
Sbjct: 121 GVGVVLGLKGIDSL 134

[Close]

BLAST of Carg14979 vs. NCBI nr
Match: XP_023004013.1 (photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 127/131 (96.95%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MAATMMTSIPQFCGLRPAVPV APVRSLVAV PLK R GGGALSARCDFIGSPTNLIMVT
Sbjct: 1   MAATMMTSIPQFCGLRPAVPVGAPVRSLVAVQPLK-RSGGGALSARCDFIGSPTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 130

[Close]

BLAST of Carg14979 vs. NCBI nr
Match: KAG6594432.1 (F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 11  QFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLMLFAGR 70
           QFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLMLFAGR
Sbjct: 321 QFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLMLFAGR 380

Query: 71  FGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGLKGIGS 130
           FGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGLKGIGS
Sbjct: 381 FGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGLKGIGS 440

Query: 131 L 132
           L
Sbjct: 441 L 441

[Close]

BLAST of Carg14979 vs. NCBI nr
Match: XP_038883621.1 (photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 119/132 (90.15%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARC-DFIGSPTNLIMV 60
           MAATMMTSIPQF GLRP V + APVRSLVAV PL+RR GGGALSARC D+IGSPTNLIMV
Sbjct: 1   MAATMMTSIPQFNGLRPTVSM-APVRSLVAVQPLRRR-GGGALSARCGDYIGSPTNLIMV 60

Query: 61  TSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGV 120
            STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACG VGHIIGV
Sbjct: 61  ISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGV 120

Query: 121 GVVLGLKGIGSL 132
           GVVLGLK IGSL
Sbjct: 121 GVVLGLKSIGSL 130

[Close]

BLAST of Carg14979 vs. ExPASy Swiss-Prot
Match: Q9SUI5 (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 9.7e-49
Identity = 101/131 (77.10%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MA+TMMT++PQF GLR     AAPV+ L +V P++R+ G GAL A+CDFIGS TNLIMVT
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRK-GNGALGAKCDFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LE RDSGLQTGDPAGFTLADTLACG VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLK IG++
Sbjct: 121 VVLGLKNIGAI 130

[Close]

BLAST of Carg14979 vs. ExPASy Swiss-Prot
Match: Q9ZT05 (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-46
Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MA +MMT++PQF GLRP +   +P++ LVA  P+ RR G GAL  RCDFIGS TN+IMV 
Sbjct: 1   MATSMMTTLPQFTGLRPQLK-PSPIQGLVAAQPMTRRKGKGALGVRCDFIGSSTNVIMVA 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPAGFTLADTLACG VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLK 127
           VVLGL+
Sbjct: 121 VVLGLR 125

[Close]

BLAST of Carg14979 vs. ExPASy Swiss-Prot
Match: P36886 (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-40
Identity = 89/126 (70.63%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 6   MTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLM 65
           MTS+PQF GLR      +  RS+  +P L+RR   G    RCD+IGS TNLIMVT+T+LM
Sbjct: 8   MTSVPQFHGLR----TYSSPRSMATLPSLRRRRSQG---IRCDYIGSSTNLIMVTTTTLM 67

Query: 66  LFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGL 125
           LFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG VGHI+GVG+VLGL
Sbjct: 68  LFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGL 126

Query: 126 KGIGSL 132
           K  G L
Sbjct: 128 KNTGVL 126

[Close]

BLAST of Carg14979 vs. ExPASy Swiss-Prot
Match: P14225 (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 30  AVPPLKRRGGGGALSARCDFIGSPTNLIMVTSTSLMLFAGRFGLAPSANRKSTAGLKL-- 89
           A+ P K       +     FIGS TNLIMV ST+  L A RFGLAP+  + +TAGLKL  
Sbjct: 10  AIRPTKAARRSSVVVRADGFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVD 69

Query: 90  EVRDSGLQTGDPAGFTLADTLACGVVGHIIGVGVVLGLKGIGSL 132
               +G+ + DPAGFT+ D LA G  GH +GVG+VLGLKGIG+L
Sbjct: 70  SKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVGIVLGLKGIGAL 113

[Close]

BLAST of Carg14979 vs. ExPASy Swiss-Prot
Match: P42051 (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-09
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 48 DFIGSPTNLIMVTSTSLMLFAGRFGLAPSANR 80
          D+IGSPTN+IMV STSLMLFAGRFGLAPSANR
Sbjct: 2  DYIGSPTNVIMVISTSLMLFAGRFGLAPSANR 33

[Close]

BLAST of Carg14979 vs. ExPASy TrEMBL
Match: A0A6J1EGC3 (PSI-K OS=Cucurbita moschata OX=3662 GN=LOC111433919 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT
Sbjct: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 131

[Close]

BLAST of Carg14979 vs. ExPASy TrEMBL
Match: A0A6J1KY94 (PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111497453 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-60
Identity = 127/131 (96.95%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MAATMMTSIPQFCGLRPAVPV APVRSLVAV PLK R GGGALSARCDFIGSPTNLIMVT
Sbjct: 1   MAATMMTSIPQFCGLRPAVPVGAPVRSLVAVQPLK-RSGGGALSARCDFIGSPTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG
Sbjct: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLKGIGSL
Sbjct: 121 VVLGLKGIGSL 130

[Close]

BLAST of Carg14979 vs. ExPASy TrEMBL
Match: A0A6J1CZY3 (PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARC-DFIGSPTNLIMV 60
           MA TMMTSIPQF GL+P V V APVRSLVAV PL+RR GGGALSARC D+IGSPTNLIMV
Sbjct: 1   MATTMMTSIPQFSGLKPTVSV-APVRSLVAVQPLRRR-GGGALSARCGDYIGSPTNLIMV 60

Query: 61  TSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGV 120
            STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACG VGHIIGV
Sbjct: 61  ISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGV 120

Query: 121 GVVLGLKGIGSL 132
           GVVLGLK IGSL
Sbjct: 121 GVVLGLKSIGSL 130

[Close]

BLAST of Carg14979 vs. ExPASy TrEMBL
Match: A0A5A7U9C9 (PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 117/132 (88.64%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARC-DFIGSPTNLIMV 60
           MAATMMT +PQF GLRP   V APVRSLVAV PL+RR GGGALSARC D+IGSPTNLIMV
Sbjct: 1   MAATMMTFVPQFNGLRPTASV-APVRSLVAVQPLRRR-GGGALSARCGDYIGSPTNLIMV 60

Query: 61  TSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGV 120
            STSLMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG VGHIIGV
Sbjct: 61  ISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGV 120

Query: 121 GVVLGLKGIGSL 132
           GVVLGLKGIGSL
Sbjct: 121 GVVLGLKGIGSL 130

[Close]

BLAST of Carg14979 vs. ExPASy TrEMBL
Match: A0A1S3AZR1 (PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 117/132 (88.64%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARC-DFIGSPTNLIMV 60
           MAATMMT +PQF GLRP   V APVRSLVAV PL+RR GGGALSARC D+IGSPTNLIMV
Sbjct: 1   MAATMMTFVPQFNGLRPTASV-APVRSLVAVQPLRRR-GGGALSARCGDYIGSPTNLIMV 60

Query: 61  TSTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGV 120
            STSLMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG VGHIIGV
Sbjct: 61  ISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGV 120

Query: 121 GVVLGLKGIGSL 132
           GVVLGLKGIGSL
Sbjct: 121 GVVLGLKGIGSL 130

[Close]

BLAST of Carg14979 vs. TAIR 10
Match: AT1G30380.1 (photosystem I subunit K )

HSP 1 Score: 194.1 bits (492), Expect = 6.9e-50
Identity = 101/131 (77.10%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MAATMMTSIPQFCGLRPAVPVAAPVRSLVAVPPLKRRGGGGALSARCDFIGSPTNLIMVT 60
           MA+TMMT++PQF GLR     AAPV+ L +V P++R+ G GAL A+CDFIGS TNLIMVT
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRK-GNGALGAKCDFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGVVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LE RDSGLQTGDPAGFTLADTLACG VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKGIGSL 132
           VVLGLK IG++
Sbjct: 121 VVLGLKNIGAI 130

The following BLAST results are available for this feature:

BLAST of Carg14979 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926961.1	1.8e-63	100.00	photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita moscha...	[more]
XP_023518883.1	4.8e-61	97.01	photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita pepo s...	[more]
XP_023004013.1	2.0e-59	96.95	photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita maxima...	[more]
KAG6594432.1	2.2e-58	100.00	F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038883621.1	2.0e-51	90.15	photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]	[more]

BLAST of Carg14979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI5	9.7e-49	77.10	Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thalian...	[more]
Q9ZT05	1.2e-46	76.19	Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=...	[more]
P36886	2.8e-40	70.63	Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=...	[more]
P14225	1.2e-19	51.92	Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinh...	[more]
P42051	9.9e-09	90.63	Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis ...	[more]

BLAST of Carg14979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGC3	8.5e-64	100.00	PSI-K OS=Cucurbita moschata OX=3662 GN=LOC111433919 PE=3 SV=1	[more]
A0A6J1KY94	9.8e-60	96.95	PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111497453 PE=3 SV=1	[more]
A0A6J1CZY3	1.7e-51	89.39	PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1	[more]
A0A5A7U9C9	4.9e-51	88.64	PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV...	[more]
A0A1S3AZR1	4.9e-51	88.64	PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1	[more]

BLAST of Carg14979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30380.1	6.9e-50	77.10	photosystem I subunit K	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 48..131 e-value: 5.7E-39 score: 134.2
IPR017493	Photosystem I reaction centre subunit PsaK, chloroplastic	TIGRFAM	TIGR03050	TIGR03050	coord: 49..131 e-value: 9.3E-47 score: 155.3
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 54..129 e-value: 8.5E-18 score: 64.1
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 1..131
None	No IPR available	PANTHER	PTHR34195:SF2	PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC	coord: 1..131
IPR035982	Photosystem I reaction centre subunit PsaK superfamily	SUPERFAMILY	81563	Photosystem I reaction center subunit X, PsaK	coord: 99..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14979-RA	Carg14979-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016020	membrane