Carg14588 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14588
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	plant-specific TFIIB-related protein PTF2
Location	Carg_Chr18: 2360744 .. 2362884 (+)
RNA-Seq Expression	Carg14588
Synteny	Carg14588

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGCTCCTGCAAGAATTGCAGCGGCAGGTCGCTCTTCCGCGACGATGTTTCTGGCAATCTGATTTGCTCCTCCTGCGGTATTGTTCAGGAATTTGACAACTACGATGCCCAGCTTGGCGGTCTCAATGGTCCGCAGGGCACATTCGTCCGCGTTGGTACCTCAGGTTCGGGCAGTGTTTTGAATTATAAGGATAAGAAAATCTATGAGGCTCAAAAAATTATTGAAGATATTACGTTTAGGTTAGGGTTTTCTGCTTCCAAATCTAACGATGTTAGGATTTTAGTATCGACGATTACAGAGGGTGAGTATGGACAAGGCGATTGGTTCTCAATTCTCGTTGGTGCCTGTTCTTACGTTTCTATGCGCAAGGATAATCGTCCGTTGCCAATGTCGGAGGTTGCATCGACCATTGAGTGTGATCTACATGAACTTGGCCGAATGGTTCTCAGAGTTGTCGATTTTTTGGATTTGAAAGGGCCTGCGTTTCCCGATTTTGATATTGTGGGGTCATTGGAGCGGGCGGCAAGGAATTCACCGTCTTTCTCAAAAGTAGAAGCGGATACACTGGACGTAATAGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTATGAAATGGTTTCTGACGACTGGGCGGCAACCACTACCCATGGTGGCTGCTGTGTTGGTTCTGGTGTCAGGACTGAATGAGGTTAATGTTAGTATCGATGATGTAGCCATGGAGGTTCATGCCAAGGTTTCTACCTGTAAGAAGAGGTACAGAGAACTTTTGGGGGCACTTGTAGAAGTTGGCAAGAAGTTGCCTTGGGGAAAAGATATCACAAAAAGGAATATTGTGAAGAATGCTCCTTTCGTGATCCAATATATGGAGTTGAAATCAATGTCAAATACCTGTGGTCAGGGGAAGAATTTCGAGGACGTGGGGATCGATATGCAGGCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTACAGTATGAAAGTGAGGTCAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTAATAGGCAATAGTTGGCGTGATGAATCGAGTTGTGATGATCGAAACAAACTCAACATTTCCCATGAATGTTTATCCTTGATTTATACTAAGTTTTTGGATGAAATGGCTCATCTCAGGTCATCGGGCGGGATTAATGAAATCTATGGAAGAAAGCTAGGAAGAAAAGCTGGTTTTCAGTCAAGTACGGAGTGGTGGGAGGGAAAATCACAATTAAGCAAAAAGCTTCTATTGCATCAATTATTGGAGACTGATGTAGGATTGAATGGTATGCCGCCTTCATTTGTAACTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAATAAACGCTGCTAAGAATCGAATCCAGAGGATCATGCTTCCTTCACACGCTGCGATTGGCGATGTAAATGCCGAGAAGGAAAGAAAGCGTAAGAGAGCTATCGGTATCGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGATGTGAAAGAGGAGGAAATTGAGAAGGGTCATTACAATGCATTGCTGGACTTGCATGTATTCAGTTCTTGGAGGTCTTAGAGCTTTCCGCATGTATACAATGTTCAAAATGTATAGACAGGAGAGGGAAATGAAGTGTACAGTATCCAGCACGAATCGCATTCTAAAACTTTGTCCATTAACAGCAAGAGGAGTTGTTTCTCGTTTGATTTGTTGATTGATGAAGTTTTGAGGTATATATATCTATGAATGCAAACTATGTAGCCATTGCTTGGAATTCTGGTTGGCAATACAGATGATGTGTTCGGGTAGAAAGCCACTCCTATTTGTTTCTTAATGTTTGTTCTCTTGCCACTCCCTGGGGCTCACTCTTTCTAAAAAATTTGCAGGAAACTACATTACAATGACGTGTACGACGAGTAGCGCTTTGCTTTCGGGGATTCAGAAGAATACCCTTCTGCCTTCTTCATTGATCTGGGGGGAAAGGAACCGTCTCGTCCTTTCTTGAAAGTAGTCTCTGCCTCAATGGATCTCCAACAACTCAACCTCAACTCGTGAATGGTGGCTTAAGGAAGCAAGGAGGCTCGCAGAACACAGTAAGATAATGTGATAGATAGCTAGACATACAACAGGAAAACTAAACT

mRNA sequence

ATGTCGGGCTCCTGCAAGAATTGCAGCGGCAGGTCGCTCTTCCGCGACGATGTTTCTGGCAATCTGATTTGCTCCTCCTGCGGTATTGTTCAGGAATTTGACAACTACGATGCCCAGCTTGGCGGTCTCAATGGTCCGCAGGGCACATTCGTCCGCGTTGGTACCTCAGGTTCGGGCAGTGTTTTGAATTATAAGGATAAGAAAATCTATGAGGCTCAAAAAATTATTGAAGATATTACGTTTAGGTTAGGGTTTTCTGCTTCCAAATCTAACGATGTTAGGATTTTAGTATCGACGATTACAGAGGGTGAGTATGGACAAGGCGATTGGTTCTCAATTCTCGTTGGTGCCTGTTCTTACGTTTCTATGCGCAAGGATAATCGTCCGTTGCCAATGTCGGAGGTTGCATCGACCATTGAGTGTGATCTACATGAACTTGGCCGAATGGTTCTCAGAGTTGTCGATTTTTTGGATTTGAAAGGGCCTGCGTTTCCCGATTTTGATATTGTGGGGTCATTGGAGCGGGCGGCAAGGAATTCACCGTCTTTCTCAAAAGTAGAAGCGGATACACTGGACGTAATAGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTATGAAATGGTTTCTGACGACTGGGCGGCAACCACTACCCATGGTGGCTGCTGTGTTGGTTCTGGTGTCAGGACTGAATGAGGTTAATGTTAGTATCGATGATGTAGCCATGGAGGTTCATGCCAAGGTTTCTACCTGTAAGAAGAGGTACAGAGAACTTTTGGGGGCACTTGTAGAAGTTGGCAAGAAGTTGCCTTGGGGAAAAGATATCACAAAAAGGAATATTGTGAAGAATGCTCCTTTCGTGATCCAATATATGGAGTTGAAATCAATGTCAAATACCTGTGGTCAGGGGAAGAATTTCGAGGACGTGGGGATCGATATGCAGGCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTACAGTATGAAAGTGAGGTCAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTAATAGGCAATAGTTGGCGTGATGAATCGAGTTGTGATGATCGAAACAAACTCAACATTTCCCATGAATGTTTATCCTTGATTTATACTAAGTTTTTGGATGAAATGGCTCATCTCAGGTCATCGGGCGGGATTAATGAAATCTATGGAAGAAAGCTAGGAAGAAAAGCTGGTTTTCAGTCAAGTACGGAGTGGTGGGAGGGAAAATCACAATTAAGCAAAAAGCTTCTATTGCATCAATTATTGGAGACTGATGTAGGATTGAATGGTATGCCGCCTTCATTTGTAACTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAATAAACGCTGCTAAGAATCGAATCCAGAGGATCATGCTTCCTTCACACGCTGCGATTGGCGATGTAAATGCCGAGAAGGAAAGAAAGCGTAAGAGAGCTATCGGTATCGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGATGTGAAAGAGGAGGAAATTGAGAAGGGTCATTACAATGCATTGCTGGACTTGCATGTATTCAGTTCTTGGAGGAAACTACATTACAATGACGTGTACGACGAGTAGCGCTTTGCTTTCGGGGATTCAGAAGAATACCCTTCTGCCTTCTTCATTGATCTGGGGGGAAAGGAACCGTCTCGTCCTTTCTTGAAAGTAGTCTCTGCCTCAATGGATCTCCAACAACTCAACCTCAACTCGTGAATGGTGGCTTAAGGAAGCAAGGAGGCTCGCAGAACACAGTAAGATAATGTGATAGATAGCTAGACATACAACAGGAAAACTAAACT

Coding sequence (CDS)

ATGTCGGGCTCCTGCAAGAATTGCAGCGGCAGGTCGCTCTTCCGCGACGATGTTTCTGGCAATCTGATTTGCTCCTCCTGCGGTATTGTTCAGGAATTTGACAACTACGATGCCCAGCTTGGCGGTCTCAATGGTCCGCAGGGCACATTCGTCCGCGTTGGTACCTCAGGTTCGGGCAGTGTTTTGAATTATAAGGATAAGAAAATCTATGAGGCTCAAAAAATTATTGAAGATATTACGTTTAGGTTAGGGTTTTCTGCTTCCAAATCTAACGATGTTAGGATTTTAGTATCGACGATTACAGAGGGTGAGTATGGACAAGGCGATTGGTTCTCAATTCTCGTTGGTGCCTGTTCTTACGTTTCTATGCGCAAGGATAATCGTCCGTTGCCAATGTCGGAGGTTGCATCGACCATTGAGTGTGATCTACATGAACTTGGCCGAATGGTTCTCAGAGTTGTCGATTTTTTGGATTTGAAAGGGCCTGCGTTTCCCGATTTTGATATTGTGGGGTCATTGGAGCGGGCGGCAAGGAATTCACCGTCTTTCTCAAAAGTAGAAGCGGATACACTGGACGTAATAGTTAAGCAAGGAATCTTTTTGTTACAGTGTGCTATGAAATGGTTTCTGACGACTGGGCGGCAACCACTACCCATGGTGGCTGCTGTGTTGGTTCTGGTGTCAGGACTGAATGAGGTTAATGTTAGTATCGATGATGTAGCCATGGAGGTTCATGCCAAGGTTTCTACCTGTAAGAAGAGGTACAGAGAACTTTTGGGGGCACTTGTAGAAGTTGGCAAGAAGTTGCCTTGGGGAAAAGATATCACAAAAAGGAATATTGTGAAGAATGCTCCTTTCGTGATCCAATATATGGAGTTGAAATCAATGTCAAATACCTGTGGTCAGGGGAAGAATTTCGAGGACGTGGGGATCGATATGCAGGCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTACAGTATGAAAGTGAGGTCAATAATTTAGAAGATGATTCTCAGTATTTTGAGTTAATAGGCAATAGTTGGCGTGATGAATCGAGTTGTGATGATCGAAACAAACTCAACATTTCCCATGAATGTTTATCCTTGATTTATACTAAGTTTTTGGATGAAATGGCTCATCTCAGGTCATCGGGCGGGATTAATGAAATCTATGGAAGAAAGCTAGGAAGAAAAGCTGGTTTTCAGTCAAGTACGGAGTGGTGGGAGGGAAAATCACAATTAAGCAAAAAGCTTCTATTGCATCAATTATTGGAGACTGATGTAGGATTGAATGGTATGCCGCCTTCATTTGTAACTAGTTGCAATGCATACAAAAGGAGGAAGGAGAAAATAAACGCTGCTAAGAATCGAATCCAGAGGATCATGCTTCCTTCACACGCTGCGATTGGCGATGTAAATGCCGAGAAGGAAAGAAAGCGTAAGAGAGCTATCGGTATCGAATGGGAAGACATAATAATCGAAACCCTTCTTCTTCATGATGTGAAAGAGGAGGAAATTGAGAAGGGTCATTACAATGCATTGCTGGACTTGCATGTATTCAGTTCTTGGAGGAAACTACATTACAATGACGTGTACGACGAGTAG

Protein sequence

MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNSPSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTCGQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKLNISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWRKLHYNDVYDE

Homology

[Close]

BLAST of Carg14588 vs. NCBI nr
Match: KAG7012472.1 (Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
Sbjct: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWRKLHYNDVYDE 535
           KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWRKLHYNDVYDE
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWRKLHYNDVYDE 534

[Close]

BLAST of Carg14588 vs. NCBI nr
Match: KAG6573303.1 (Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1050.4 bits (2715), Expect = 5.1e-303
Identity = 521/524 (99.43%), Postives = 523/524 (99.81%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           GQGKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETD+GLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR
Sbjct: 421 HQLLETDIGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 524

[Close]

BLAST of Carg14588 vs. NCBI nr
Match: XP_022994521.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita maxima])

HSP 1 Score: 1045.0 bits (2701), Expect = 2.2e-301
Identity = 518/524 (98.85%), Postives = 521/524 (99.43%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLD+IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           GQGKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSW DESSCDDRNKL
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWHDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSG INEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGEINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRA+GIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR
Sbjct: 481 KRAVGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 524

[Close]

BLAST of Carg14588 vs. NCBI nr
Match: XP_023542889.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1044.6 bits (2700), Expect = 2.8e-301
Identity = 518/524 (98.85%), Postives = 522/524 (99.62%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLD+IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPS+AAIGDVNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNAAIGDVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVF SWR
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFGSWR 524

[Close]

BLAST of Carg14588 vs. NCBI nr
Match: XP_022955013.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita moschata])

HSP 1 Score: 1041.2 bits (2691), Expect = 3.1e-300
Identity = 517/524 (98.66%), Postives = 521/524 (99.43%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQ IIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQNIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPS+ AIG+VNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNTAIGNVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 524

[Close]

BLAST of Carg14588 vs. ExPASy Swiss-Prot
Match: O81787 (Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF2 PE=1 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.1e-126
Identity = 245/532 (46.05%), Postives = 344/532 (64.66%), Query Frame = 0


Query: 5   CKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNY 64
           CK C+G +  RD+ +GN  C  CG ++E+DNY+AQLGG+ GPQGT++RVGT G GSVL+Y
Sbjct: 3   CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62

Query: 65  KDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSYVSMR 124
           KDKKIYEA  +IE+ T RL    +K+  ++ ++S +T+GE+GQG+WF IL+GAC Y  +R
Sbjct: 63  KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122

Query: 125 KDNR-PLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNSPSF 184
           ++ +  L M EVA  + CDLH+LG M+ RVVD LDL+     +FD+VG   +   NSP  
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDLE---LREFDLVGLFTKTVTNSPRL 182

Query: 185 SKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDVAME 244
           + V+ D  + I+KQG FL+ CA+KWFL+TGR+P+P+V AVL  V  +N V V IDD+A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242

Query: 245 VHAKVSTCKKRYRELLGALVEVGKK--LPWGKDITKRNIVKNAPFVIQYMELKSM-SNTC 304
               ++TCK RY+EL   LV+V ++  LPW KD+T +N++K++  +   ME KSM     
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302

Query: 305 GQGKNF-EDVGIDMQAAVSECLRKELQYESEVNNLEDD-SQYFELIGNSWRDESSCDDRN 364
           G GK      G  ++  V +CL KE  Y  + +  +D  S+YF++ G       + DD  
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGERQLSLCNYDD-- 362

Query: 365 KLNISHECLSLIYTKFLDEMA----HLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQL 424
             NIS   LS  Y +F D +       RS G    ++ R+     G  S+  WW+GKS+L
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRR--SVFGMVSTENWWKGKSEL 422

Query: 425 SKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPS-HAAIGDVN 484
           SK+LLL  LLE DVGL  +PPS++  C A +RR+EKI AAK RI  I  PS + + G ++
Sbjct: 423 SKRLLLKDLLEKDVGLEALPPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGALS 482

Query: 485 AEKE---RKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 523
            E E   +KRK+   I+WED++I+TL+LH+V EEEIEKGHY  LLDLHVF+S
Sbjct: 483 LELEHSKKKRKKGSEIDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524

[Close]

BLAST of Carg14588 vs. ExPASy Swiss-Prot
Match: Q3UAW9 (Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-09
Identity = 67/307 (21.82%), Postives = 127/307 (41.37%), Query Frame = 0


Query: 5   CKNCSGRSLFRDD--VSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRV----GTSGS 64
           C +C    L  D       L+CS CG V      +  L      +G F  V     T  +
Sbjct: 7   CPDCGSSELVEDSHYSQSQLVCSDCGCVVT----EGVLTTTFSDEGNFREVTYSRSTGEN 66

Query: 65  GSVLNYKDKKIYEAQKIIEDITFRLGF--SASKSNDVRILVSTITEGEYGQGDWFSILVG 124
             V   + + +   + +   +   L F  +A         +S I      + +   +LVG
Sbjct: 67  EQVSRCQQRDLRRVRDLCRILKLPLTFEDTAISYYQKAYQLSGIRAARLQKKE---VLVG 126

Query: 125 ACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSL--- 184
            C  ++ R+ N PL M  + + +  DL       +++V  L L  P+    D+V S    
Sbjct: 127 CCVLITCRQHNWPLTMGTICTLLYADLDLFSGTYMQMVKLLGLDVPSLCLADLVKSYCSS 186

Query: 185 ERAARNSPSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVL----VSG 244
            +  + SPS      +  D ++ + + L++ A + +L TGR PLP++ A   L    +  
Sbjct: 187 FKLFQASPSVPAKYVEDKDKMLSRTLLLVELADETWLVTGRHPLPIITAATFLAWQSLRP 246

Query: 245 LNEVNVSIDDVAMEVHAKVS-TCKKRYRELLGALVEVGKKLPWGK--DITKRNIVKNAPF 294
            + +  S+       +  +      R +ELL  L+++  +L W +   + KR++VK+   
Sbjct: 247 SDRLTCSLAQFCKLANVDLPYPAASRLQELLAVLLQMAGQLAWLQVLKLNKRSVVKHIGD 306

[Close]

BLAST of Carg14588 vs. ExPASy Swiss-Prot
Match: Q4V8D6 (Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.7e-09
Identity = 45/191 (23.56%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 113 ILVGACSYVSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGS 172
           ++VG C  ++ R+ N PL M  + + +  DL       +++V  L L  P+    D+V S
Sbjct: 116 VVVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLADLVKS 175

Query: 173 L---ERAARNSPSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVL--- 232
                +  + SPS      +  D ++ + + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSMPAKYVEDKDKMLSRTLLLVELANETWLVTGRHPLPIITAATFLAWQ 235

Query: 233 -VSGLNEVNVSIDDVAMEVHAKVS-TCKKRYRELLGALVEVGKKLPWGK--DITKRNIVK 292
            +   + +  S+       +  +      R +ELL  L+++  +L W +   + KR++VK
Sbjct: 236 SLRPSDRLTCSLARFCKLANVDLPYPAASRLQELLAVLLQMASQLAWLQVLRLDKRSVVK 295

Query: 293 NAPFVIQYMEL 294
           +   ++Q+  +
Sbjct: 296 HIGDLLQHRHM 306

[Close]

BLAST of Carg14588 vs. ExPASy Swiss-Prot
Match: A0B5T8 (Transcription initiation factor IIB OS=Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) OX=349307 GN=tfb PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.8e-04
Identity = 64/299 (21.40%), Postives = 104/299 (34.78%), Query Frame = 0


Query: 5   CKNCSGRSLFRDDVSGNLICSSCGIV------------QEFDNYDAQLGGLNGPQGTFVR 64
           C  C  R+L RD     L+CS CG+V            + FD+         G   T+  
Sbjct: 41  CPECGSRALVRDYERAELVCSECGLVIDENFIDQGPEWRAFDHDQRMKRSRVGAPMTYT- 100

Query: 65  VGTSGSGSVLNYKDKKIYE---------------------------------AQKIIEDI 124
           +   G  ++++++++  Y                                  A   ++ +
Sbjct: 101 IHDKGLSTMIDWRNRDSYGKTISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRM 160

Query: 125 TFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSYVSMRKDNRPLPMSEVASTI 184
              LG S +      ++     E    +G     +  A  Y + R+ N P  + E+A   
Sbjct: 161 ASALGLSRNVRETAAVIYRRAVEKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVS 220

Query: 185 ECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNSPSFSKVEADTLDVIVKQGI 244
                E+GR    V   L LK       D +          P F        DV  K GI
Sbjct: 221 RVSRKEIGRTYRFVSRELSLKLMPTSPIDYI----------PRFCSGLNLKGDVQAK-GI 280

Query: 245 FLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDVAMEVHAKVSTCKKRYREL 259
            +L+ A +  LT+GR P  + AA + + S L     +  +VA        T + RY+EL
Sbjct: 281 EILRQAAEKELTSGRGPTGVAAAAIYIASILCNDRRTQREVADVAGVTEVTIRNRYKEL 327

[Close]

BLAST of Carg14588 vs. ExPASy TrEMBL
Match: A0A6J1JZD6 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC111490217 PE=4 SV=1)

HSP 1 Score: 1045.0 bits (2701), Expect = 1.0e-301
Identity = 518/524 (98.85%), Postives = 521/524 (99.43%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLD+IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           GQGKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSW DESSCDDRNKL
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWHDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSG INEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGEINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRA+GIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR
Sbjct: 481 KRAVGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 524

[Close]

BLAST of Carg14588 vs. ExPASy TrEMBL
Match: A0A6J1GSR8 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC111457096 PE=4 SV=1)

HSP 1 Score: 1041.2 bits (2691), Expect = 1.5e-300
Identity = 517/524 (98.66%), Postives = 521/524 (99.43%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQ IIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
Sbjct: 61  VLNYKDKKIYEAQNIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GKNFEDVGID+QAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
           HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPS+ AIG+VNAEKERKR
Sbjct: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNTAIGNVNAEKERKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 525
           KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR
Sbjct: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWR 524

[Close]

BLAST of Carg14588 vs. ExPASy TrEMBL
Match: A0A5A7UMA0 (Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002190 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.7e-257
Identity = 442/522 (84.67%), Postives = 483/522 (92.53%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCK+C+ RS+FRDDVSGNLICSSCGIVQEF+NY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKK+YEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPL MSEVAS +ECDLHELGRMV+RVVDFLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFS++EAD L+ IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VS+++V
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GK+ E+VGID+Q+AVSECLRKEL+YESEVNNLEDDSQYFEL G+ W DES+CD+ N+L
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIY KFLDEMA LRSSGGIN++YGRK GRKAGF SSTEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
            QLLETD+G  G+PPSFV+SCNAYKRRKEK+NAAK RIQRIM PS+A  GDVN +K+RKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 523
           K A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDLHVF+S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTS 522

[Close]

BLAST of Carg14588 vs. ExPASy TrEMBL
Match: A0A1S3B6X4 (transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.7e-257
Identity = 442/522 (84.67%), Postives = 483/522 (92.53%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCK+C+ RS+FRDDVSGNLICSSCGIVQEF+NY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKK+YEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKDNRPL MSEVAS +ECDLHELGRMV+RVVDFLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFS++EAD L+ IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VS+++V
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
           AMEVHAKVSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GK+ E+VGID+Q+AVSECLRKEL+YESEVNNLEDDSQYFEL G+ W DES+CD+ N+L
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIY KFLDEMA LRSSGGIN++YGRK GRKAGF SSTEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
            QLLETD+G  G+PPSFV+SCNAYKRRKEK+NAAK RIQRIM PS+A  GDVN +K+RKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 523
           K A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDLHVF+S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTS 522

[Close]

BLAST of Carg14588 vs. ExPASy TrEMBL
Match: A0A0A0M0A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 3.5e-249
Identity = 433/522 (82.95%), Postives = 472/522 (90.42%), Query Frame = 0


Query: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60
           MSGSCKNC  RS+FRDDVSGN ICSSCGIVQEFDNYDAQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYDAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120
           VLNYKDKKIYEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVAS +ECDLHELGRMV+RVV+FLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240
           PSFS++EAD L+ IVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VSI++V
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240

Query: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300
            MEVHA VSTCKKRYRELL ALVEVGKKLPWGKDIT +NIVKNAPFVIQYMELKSMS   
Sbjct: 241 GMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKAS 300

Query: 301 GQGKNFEDVGIDMQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360
           G+GK+ E+V ID+Q+AVSECLRKEL+YESEV NLEDDSQYFEL  + W+DES+ D+ N+L
Sbjct: 301 GKGKDLENVEIDLQSAVSECLRKELEYESEVYNLEDDSQYFELQRSRWQDESNRDNGNRL 360

Query: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420
           NISHECLSLIY KFLDEMA LRSSGGINE+YG K GRK GF SSTEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINEVYGTKQGRKTGFYSSTEWWEGKSELSKKLLL 420

Query: 421 HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERKR 480
            QLLETD+G  G+PPSFV+SCNAY+RRKEK+NAAK RIQRIM PS A   DVN +K+RKR
Sbjct: 421 QQLLETDIGSQGIPPSFVSSCNAYERRKEKVNAAKKRIQRIMHPSTAPADDVNIKKKRKR 480

Query: 481 KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 523
           K A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDL+VF+S
Sbjct: 481 KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 522

[Close]

BLAST of Carg14588 vs. TAIR 10
Match: AT4G35540.1 (zinc ion binding;transcription regulators )

HSP 1 Score: 454.1 bits (1167), Expect = 1.5e-127
Identity = 245/532 (46.05%), Postives = 344/532 (64.66%), Query Frame = 0


Query: 5   CKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGSVLNY 64
           CK C+G +  RD+ +GN  C  CG ++E+DNY+AQLGG+ GPQGT++RVGT G GSVL+Y
Sbjct: 3   CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62

Query: 65  KDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSYVSMR 124
           KDKKIYEA  +IE+ T RL    +K+  ++ ++S +T+GE+GQG+WF IL+GAC Y  +R
Sbjct: 63  KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122

Query: 125 KDNR-PLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPDFDIVGSLERAARNSPSF 184
           ++ +  L M EVA  + CDLH+LG M+ RVVD LDL+     +FD+VG   +   NSP  
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDLE---LREFDLVGLFTKTVTNSPRL 182

Query: 185 SKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDVAME 244
           + V+ D  + I+KQG FL+ CA+KWFL+TGR+P+P+V AVL  V  +N V V IDD+A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242

Query: 245 VHAKVSTCKKRYRELLGALVEVGKK--LPWGKDITKRNIVKNAPFVIQYMELKSM-SNTC 304
               ++TCK RY+EL   LV+V ++  LPW KD+T +N++K++  +   ME KSM     
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302

Query: 305 GQGKNF-EDVGIDMQAAVSECLRKELQYESEVNNLEDD-SQYFELIGNSWRDESSCDDRN 364
           G GK      G  ++  V +CL KE  Y  + +  +D  S+YF++ G       + DD  
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGERQLSLCNYDD-- 362

Query: 365 KLNISHECLSLIYTKFLDEMA----HLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQL 424
             NIS   LS  Y +F D +       RS G    ++ R+     G  S+  WW+GKS+L
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRR--SVFGMVSTENWWKGKSEL 422

Query: 425 SKKLLLHQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPS-HAAIGDVN 484
           SK+LLL  LLE DVGL  +PPS++  C A +RR+EKI AAK RI  I  PS + + G ++
Sbjct: 423 SKRLLLKDLLEKDVGLEALPPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGALS 482

Query: 485 AEKE---RKRKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 523
            E E   +KRK+   I+WED++I+TL+LH+V EEEIEKGHY  LLDLHVF+S
Sbjct: 483 LELEHSKKKRKKGSEIDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524

The following BLAST results are available for this feature:

BLAST of Carg14588 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012472.1	0.0e+00	100.00	Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp...	[more]
KAG6573303.1	5.1e-303	99.43	Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp...	[more]
XP_022994521.1	2.2e-301	98.85	plant-specific TFIIB-related protein PTF2 [Cucurbita maxima]	[more]
XP_023542889.1	2.8e-301	98.85	plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955013.1	3.1e-300	98.66	plant-specific TFIIB-related protein PTF2 [Cucurbita moschata]	[more]

BLAST of Carg14588 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81787	2.1e-126	46.05	Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF...	[more]
Q3UAW9	1.6e-09	21.82	Transcription factor IIIB 50 kDa subunit OS=Mus musculus OX=10090 GN=Brf2 PE=1 S...	[more]
Q4V8D6	4.7e-09	23.56	Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 P...	[more]
A0B5T8	7.8e-04	21.40	Transcription initiation factor IIB OS=Methanothrix thermoacetophila (strain DSM...	[more]

BLAST of Carg14588 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZD6	1.0e-301	98.85	plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GSR8	1.5e-300	98.66	plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5A7UMA0	2.7e-257	84.67	Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B6X4	2.7e-257	84.67	transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826...	[more]
A0A0A0M0A0	3.5e-249	82.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1	[more]

BLAST of Carg14588 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35540.1	1.5e-127	46.05	zinc ion binding;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 317..337
None	No IPR available	GENE3D	1.10.472.10		coord: 184..264 e-value: 3.9E-7 score: 32.2
None	No IPR available	GENE3D	1.10.472.10		coord: 62..161 e-value: 1.6E-8 score: 36.4
None	No IPR available	GENE3D	2.20.25.10		coord: 2..39 e-value: 1.2E-5 score: 26.4
None	No IPR available	PANTHER	PTHR11618:SF13	TRANSCRIPTION INITIATION FACTOR IIB	coord: 3..297
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 4..37
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 3..297
IPR013137	Zinc finger, TFIIB-type	PROSITE	PS51134	ZF_TFIIB	coord: 1..32 score: 7.724743
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 194..259
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 72..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14588-RA	Carg14588-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070897	transcription preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0017025	TBP-class protein binding