Carg14586 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14586
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Dof zinc finger protein
Location	Carg_Chr18: 2375129 .. 2375596 (-)
RNA-Seq Expression	Carg14586
Synteny	Carg14586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCGGAGAGAAACAAGTATGAAGACGACGAGGGTGGAATCAAGCTATTTGGGACAACAATTACGTTGCAAAACAAGAGGCAAATGAAAGAAGAAGACACCAACAAATCAGAATCAGCTGAAAAAAAACCGGACAAGATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCTGTCGGAGCCGGCCGCCGGAAAACCAAGCCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGTCAAGATGGTCAAACTTGTTGA

mRNA sequence

ATGATGGCGGAGAGAAACAAGTATGAAGACGACGAGGGTGGAATCAAGCTATTTGGGACAACAATTACGTTGCAAAACAAGAGGCAAATGAAAGAAGAAGACACCAACAAATCAGAATCAGCTGAAAAAAAACCGGACAAGATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCTGTCGGAGCCGGCCGCCGGAAAACCAAGCCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGTCAAGATGGTCAAACTTGTTGA

Coding sequence (CDS)

ATGATGGCGGAGAGAAACAAGTATGAAGACGACGAGGGTGGAATCAAGCTATTTGGGACAACAATTACGTTGCAAAACAAGAGGCAAATGAAAGAAGAAGACACCAACAAATCAGAATCAGCTGAAAAAAAACCGGACAAGATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCTGTCGGAGCCGGCCGCCGGAAAACCAAGCCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGTCAAGATGGTCAAACTTGTTGA

Protein sequence

MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC

Homology

[Close]

BLAST of Carg14586 vs. NCBI nr
Match: XP_022955029.1 (dof zinc finger protein DOF1.5-like [Cucurbita moschata] >XP_023542296.1 dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo] >KAG6573305.1 Cyclic dof factor 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012474.1 Cyclic dof factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.1 bits (871), Expect = 9.9e-90
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60
           MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK
Sbjct: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60

Query: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS
Sbjct: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120

Query: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 156
           GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Carg14586 vs. NCBI nr
Match: XP_022994968.1 (cyclic dof factor 4-like [Cucurbita maxima])

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-88
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60
           MMAERNKYEDDEGGIKLFGTTI LQNKRQMKEEDTNKSESAEKKPDKMIPCPRC+SPDTK
Sbjct: 1   MMAERNKYEDDEGGIKLFGTTIVLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCQSPDTK 60

Query: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS
Sbjct: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120

Query: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 156
           GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Carg14586 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 5.3e-67
Identity = 132/177 (74.58%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQM--------KEEDTNKS--ESAEKKPDKMIP 60
           MM ER    ++EGGIKLFGTTI LQN RQ+        +EE+ NKS  +S EK+P+K+IP
Sbjct: 1   MMGERE--NNNEGGIKLFGTTIMLQNNRQIIKEEEDEEEEEEPNKSDQQSLEKRPEKIIP 60

Query: 61  CPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDG 120
           CPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF G
Sbjct: 61  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAG 120

Query: 121 LPENCVFDSSGMVAVQPFEL----EEWH--------GGFNQISPVKRRRDCQDGQTC 156
           LPENCVFDSSGMVAVQPFEL    EEWH        GGF Q+ PVKRRRDCQDGQTC
Sbjct: 121 LPENCVFDSSGMVAVQPFELEGMVEEWHVVAAAATQGGFRQMLPVKRRRDCQDGQTC 175

[Close]

BLAST of Carg14586 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65
Identity = 128/178 (71.91%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 1   MMAERNKYEDDE----GGIKLFGTTITLQNKRQM-----KEEDTNKS--ESAEKKPDKMI 60
           MM ER   +++E    GGIKLFG TI LQNKRQ+     +EE+ NKS  ++ EK+P+K+I
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 61  PCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFD 120
           PCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 121 GLPENCVFDSSGMVAVQPFEL----EEWH--------GGFNQISPVKRRRDCQDGQTC 156
           GLPENCVFDSSG+V VQPFEL    E+WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Carg14586 vs. NCBI nr
Match: XP_023519982.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 127/168 (75.60%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MMAERNKY-EDDEGGIKLFGTTITLQNKRQMKEE-DTNKSESAEKKPDKMIPCPRCKSPD 60
           MMAER K  ED EGGIKLFG TI L N R +KEE + +  +S EK+PDK+IPCPRCKS D
Sbjct: 2   MMAERKKNDEDQEGGIKLFGATIMLHNNRILKEEPNDSDQQSTEKRPDKIIPCPRCKSMD 61

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFD 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCVFD
Sbjct: 62  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCVFD 121

Query: 121 SSGMVAVQPFEL----EEWH-------GGFNQISPVKRRRDCQDGQTC 156
           SSG+VAVQPFEL    EEWH        GF QI PVKRRR  QDGQ C
Sbjct: 122 SSGIVAVQPFELEGMVEEWHVVAAAAQDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Carg14586 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-41
Identity = 91/172 (52.91%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 11  DEGGIKLFGTTITLQNK--RQMKEEDTNKSE-----------------SAEKKPDKMIPC 70
           D  GIKLFG TIT      + +K+E+  + +                 +AEK+PDK+IPC
Sbjct: 5   DSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPC 64

Query: 71  PRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGL 130
           PRCKS +TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G 
Sbjct: 65  PRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGF 124

Query: 131 PE--NCVFDSSGMVAVQPFELEEW------HGGFNQISPVKRRRDCQDGQTC 156
            E       +   V +    +EEW      HGGF    PVKR R   DGQ+C
Sbjct: 125 AELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Carg14586 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-41
Identity = 89/170 (52.35%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 11  DEGGIKLFGTTITLQNKRQMKEEDTNKSE---------------SAEKKPDKMIPCPRCK 70
           D  GIKLFG TI    +    EE+T+  E               +AEK+PDK+I CPRCK
Sbjct: 5   DSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCK 64

Query: 71  SPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENC 130
           S +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+    
Sbjct: 65  SMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM---- 124

Query: 131 VFDSSGMVAVQPFE---LEEW-------HGGFNQISPVKRRRDCQDGQTC 156
           + D +G+  V+      +EEW       HG F    P+KR R   DGQ+C
Sbjct: 125 LGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Carg14586 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-28
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 39  ESAEKKPDKMIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGR 98
           E   KKPDK++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGR
Sbjct: 128 EGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGR 187

Query: 99  RKTKPPCRTFD 110
           RK K P   ++
Sbjct: 188 RKNKSPASHYN 198

[Close]

BLAST of Carg14586 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-27
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 9   EDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAE-----------KKPDKMIPCPRCKSP 68
           E  +  IKLFG  I      ++ +E+  K+++             KKP K++PCPRC S 
Sbjct: 3   ETKDPAIKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSM 62

Query: 69  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 103
           +TKFCY+NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 63  ETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of Carg14586 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 33  EDTNKSESAEKKPDKMIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNV 92
           + T       KKP K++PCPRCKS +TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNV
Sbjct: 94  QQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNV 153

Query: 93  PVGAGRRKTK 103
           PVGAGRRK K
Sbjct: 154 PVGAGRRKNK 163

[Close]

BLAST of Carg14586 vs. ExPASy TrEMBL
Match: A0A6J1GUR3 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111457108 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.8e-90
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60
           MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK
Sbjct: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60

Query: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS
Sbjct: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120

Query: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 156
           GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Carg14586 vs. ExPASy TrEMBL
Match: A0A6J1K6K0 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490555 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.3e-89
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MMAERNKYEDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCKSPDTK 60
           MMAERNKYEDDEGGIKLFGTTI LQNKRQMKEEDTNKSESAEKKPDKMIPCPRC+SPDTK
Sbjct: 1   MMAERNKYEDDEGGIKLFGTTIVLQNKRQMKEEDTNKSESAEKKPDKMIPCPRCQSPDTK 60

Query: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS
Sbjct: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSS 120

Query: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 156
           GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC
Sbjct: 121 GMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 155

[Close]

BLAST of Carg14586 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.3e-66
Identity = 128/178 (71.91%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 1   MMAERNKYEDDE----GGIKLFGTTITLQNKRQM-----KEEDTNKS--ESAEKKPDKMI 60
           MM ER   +++E    GGIKLFG TI LQNKRQ+     +EE+ NKS  ++ EK+P+K+I
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 61  PCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFD 120
           PCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 121 GLPENCVFDSSGMVAVQPFEL----EEWH--------GGFNQISPVKRRRDCQDGQTC 156
           GLPENCVFDSSG+V VQPFEL    E+WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Carg14586 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.3e-66
Identity = 128/178 (71.91%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 1   MMAERNKYEDDE----GGIKLFGTTITLQNKRQM-----KEEDTNKS--ESAEKKPDKMI 60
           MM ER   +++E    GGIKLFG TI LQNKRQ+     +EE+ NKS  ++ EK+P+K+I
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 61  PCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFD 120
           PCPRCKS DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 121 GLPENCVFDSSGMVAVQPFEL----EEWH--------GGFNQISPVKRRRDCQDGQTC 156
           GLPENCVFDSSG+V VQPFEL    E+WH        GGF QI PVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Carg14586 vs. ExPASy TrEMBL
Match: A0A6J1KLC9 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.1e-65
Identity = 127/168 (75.60%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MMAERNKY-EDDEGGIKLFGTTITLQNKRQMKEE-DTNKSESAEKKPDKMIPCPRCKSPD 60
           MMAER K  ED EGGIKLFG TI L N R +KEE + +  +S EK+PDK+IPCPRCKS D
Sbjct: 2   MMAERKKNDEDQEGGIKLFGATIMLHNNRILKEEPNDSDQQSPEKRPDKIIPCPRCKSMD 61

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFD 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCVFD
Sbjct: 62  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCVFD 121

Query: 121 SSGMVAVQPFEL----EEW-------HGGFNQISPVKRRRDCQDGQTC 156
           SSG+VAVQPFEL    EEW       H GF QI PVKRRR  QDGQ C
Sbjct: 122 SSGIVAVQPFELEGMVEEWHVVAAAAHDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Carg14586 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-42
Identity = 91/172 (52.91%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 11  DEGGIKLFGTTITLQNK--RQMKEEDTNKSE-----------------SAEKKPDKMIPC 70
           D  GIKLFG TIT      + +K+E+  + +                 +AEK+PDK+IPC
Sbjct: 5   DSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPC 64

Query: 71  PRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGL 130
           PRCKS +TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G 
Sbjct: 65  PRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGF 124

Query: 131 PE--NCVFDSSGMVAVQPFELEEW------HGGFNQISPVKRRRDCQDGQTC 156
            E       +   V +    +EEW      HGGF    PVKR R   DGQ+C
Sbjct: 125 AELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Carg14586 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 168.3 bits (425), Expect = 4.8e-42
Identity = 89/170 (52.35%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 11  DEGGIKLFGTTITLQNKRQMKEEDTNKSE---------------SAEKKPDKMIPCPRCK 70
           D  GIKLFG TI    +    EE+T+  E               +AEK+PDK+I CPRCK
Sbjct: 5   DSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCK 64

Query: 71  SPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENC 130
           S +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+    
Sbjct: 65  SMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM---- 124

Query: 131 VFDSSGMVAVQPFE---LEEW-------HGGFNQISPVKRRRDCQDGQTC 156
           + D +G+  V+      +EEW       HG F    P+KR R   DGQ+C
Sbjct: 125 LGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Carg14586 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 39  ESAEKKPDKMIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGR 98
           E   KKPDK++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGR
Sbjct: 128 EGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGR 187

Query: 99  RKTKPPCRTFD 110
           RK K P   ++
Sbjct: 188 RKNKSPASHYN 198

[Close]

BLAST of Carg14586 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 125.2 bits (313), Expect = 4.7e-29
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 39  ESAEKKPDKMIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGR 98
           E   KKPDK++PCPRC S +TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGR
Sbjct: 128 EGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGR 187

Query: 99  RKTKPPCRTFD 110
           RK K P   ++
Sbjct: 188 RKNKSPASHYN 198

[Close]

BLAST of Carg14586 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 122.1 bits (305), Expect = 4.0e-28
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 9   EDDEGGIKLFGTTITLQNKRQMKEEDTNKSESAE-----------KKPDKMIPCPRCKSP 68
           E  +  IKLFG  I      ++ +E+  K+++             KKP K++PCPRC S 
Sbjct: 3   ETKDPAIKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSM 62

Query: 69  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 103
           +TKFCY+NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 63  ETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

The following BLAST results are available for this feature:

BLAST of Carg14586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955029.1	9.9e-90	100.00	dof zinc finger protein DOF1.5-like [Cucurbita moschata] >XP_023542296.1 dof zin...	[more]
XP_022994968.1	1.1e-88	98.71	cyclic dof factor 4-like [Cucurbita maxima]	[more]
XP_038895022.1	5.3e-67	74.58	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_008443229.1	1.7e-65	71.91	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
XP_023519982.1	1.4e-64	75.60	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg14586 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	5.2e-41	52.91	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	6.8e-41	52.35	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q93ZL5	6.6e-28	73.24	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	5.6e-27	52.38	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q8LFV3	1.2e-26	71.43	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Carg14586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUR3	4.8e-90	100.00	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11145710...	[more]
A0A6J1K6K0	5.3e-89	98.71	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490555 PE=4 SV=1	[more]
A0A5A7UQX1	8.3e-66	71.91	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B895	8.3e-66	71.91	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A6J1KLC9	9.1e-65	75.60	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1	[more]

BLAST of Carg14586 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	3.7e-42	52.91	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	4.8e-42	52.35	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	4.7e-29	73.24	cycling DOF factor 2	[more]
AT5G39660.2	4.7e-29	73.24	cycling DOF factor 2	[more]
AT5G62430.1	4.0e-28	52.38	cycling DOF factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..47
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 11..148
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 11..148
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 46..102 e-value: 1.9E-31 score: 108.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 51..87
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 49..103 score: 28.37871

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14586-RA	Carg14586-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity