Carg14329 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14329
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCRS2-associated factor 2, chloroplastic
LocationCarg_Chr04: 10150077 .. 10154015 (+)
RNA-Seq ExpressionCarg14329
SyntenyCarg14329
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCTGAAAGGCTCGTGGGAGCTCTGCCTTATCTGTCTCCTCCATCGAGAGGGAAAGAAGGTACTGTAACAATGGCAAGAATGCCGTCACTGCCAGGCCTCCACCTATTTTCCTCTCTCCCTTCAGCTCCGCCGCCGCACGATCCTTCCTCCGCTTCTACTCCTTCAACACCCATTCCAATTCCCAAATACCCTCCACCCAAATCCCGCATTCTTCGAACCAACCCTCCAAAACCACCTAATCCTGCTCTCAAAACCTTCCACCGCCGTTCCAAATACTACAAGCCTGTCAAGGACGGAGTAATTTCATCCCACGGCGATCGAGCCGTCGTCATCGGCGATTCGGGTGTCTCGTATCTACTTCCCGACGCTCCATTTGAGTTTCAGTATAGCTACTCTGAGATCCCCAAGGTCAAGCCCATTGCAATTCGTGAACCGGCGTTTCTGCCCTTTGCACCTCCGACGATGCCGAGGCCCTGGACGGGTAAAGCTCCGTTGAAGAGCTCGAAGAAGAAAATCCCTCTATTTGATTCCTTCAATCCGCCTCCTCCTGGTACGAAGGGAGTTAAGCAAGTCGAAATGCCTGGCCCGTTCCCGCTTGGCAAGTATCCGAAAGAGGGGAAAAGCAGAGAGGAGATACTTGGGGAGCCCCTCAAGAATTGGGAGATACGCATGCTGGTGAAACCCCATTTGTCACATAATCGCCAGGTTAATCTTGGTGAGCTATGATTTCTTCTCCCCGTTTCCTTATGCAGTTTAACTATCGCTGGTTGTTATGTGATCATATATATATGCCTTGTTGCGATTCCCAGTTCTATGATCGGCTGAAGTTGGTGACCTTTTTTCATTTGAATTGGACGTGTTAGGAAGGGATGGACTTACCCACAATATGTTGGAATTGATCCATTCTCATTGGAAGCGGCAGCGTGTCTGTAAAGTTCGCTGCAAAGGTGTTCCCACAGTTGATATGGACAATATCTGCCATCATCTCGAGGTATAATTTTCTCACATTCTTCATTTTGTAGTCATTTCTATTGAATTGTATGAAGCAAGTTTTGTTTTATCTTTGCCTTCCCTTATGAGTACTACTGGATAGATGTTCTGCTAGTTTCACAATACCAAATTTGTATCACACTTTCCCACGTAATTGTGGTTACAGGTGTAACCGCCCAAGCCCACTACTAGAAGATATTATCTTAGGCTTTCCGTTTCGAGCTTCCCTTCAAGGTTTTAATACGTGTCCGCTAGGGAGAGGTTTCAGGTTTCCACACCTCTGCAAAGAATGTCAATGTTTCGTTCTCTTCCCCCAACCGAGGTGGGATCTCACAATCCACCACTCTTCGGGTCCAGCGTCCTCGTTGGTATACGTTCCCTTCTCCAATCGATTTGGGACCCTCAATCCACCTTCTTTGGGGCGTAGCGTCCTTTTTGGCACACCGCTTCGTGTCCACTCCCTTCGGGGCTCAGGCTCCTCGCTGGCACATCGCCTCGTGTCTGGCTCTAATACCATTTGTAACCGTCCAAACCTACCGCTATCAAATATTGTCCTCTTTGGTCTTTCCCTTTCAAGTTTCCCCTCAAGTTTTAAAACGCGTATAATAGGTAGAGGTTTCCACACACTTATAAAGAATGTTTCGCTCTCCTCACCAACCAATGTGGGATCTCACAATGGTGCTATATTTTATGGATTGCATTATAATACTCTGAGAAAGCAAGAGAAATATGGCATAATTCACTCATAACCAATGCTAAATGTGCCAAACTCCAAAACATTATGTCACAAGCTTATGTTGTGGCGCTGGATGTACCATGCTATCCTAATTCAAACCAGCCTGATAAAATCTACCAGGTTTGTATGCTACCAACATTATTCCCATTTGACCGATAGCGAGACCATATTCATCTTGTACAACATGATAAGGAATTGTCCCTGAATCGATTTCCTCTAATTTGCTACTGCATGATATGAGTTTTCTCTTTTTCTATAAGAATGTTGTCCCTGAATGTTTACATTCCCCAAACTCTTCCTGACAAATTCCCTTTTGATTTATGAGAAACAGCCAGCATTCTCAGTTCATTTACATGTTAGTTCCTTGTGCTAATGATTCCAGGAAAAAACAGGTGGAAAAATAATTCACCGAGTCGGTGGCGTATTATATCTTTTCCGAGGTAGAAACTACAATTATCGCACTCGCCCTCAATACCCTGTAATGCTGTGGAAACCTGCGGCCCCTGTGTATCCGAAACTTATTCAAGAAGCTCCAGAAGGTTTAACTATAGAGGAAGCTAATGAGCTAAGGATGAAAGGGAAAAATCTTTTGCCAATATGTAAATTAGGTAAATGAGTATATCATTCTCCACGGTCTCCAAAAGAGTTCTTTAATTCCATATTGCTATCGACCTAAGATGATCCTTTCTCTATTTTTCTCATTTTCTTTATGGTCAACTTTGAAAGTGAGATAATTTATAGTGCTTTTGTGATAGAGGCAATGTTAGTCATTTGTGAAGATGAAAAATAGGTGATGAAGCTAATGAGCCAAGACTTTAAGAATGGAAAAGAAATATTTTGATGTGGAACGGGATGCGACCATGATGGGCAACGTGATTCCATGGAGTAATAGGTTTGTCAGTTTGGTTGGGTTGGGTTGGGTTGGGTCCCAAACTTTTGGATTGGTCCAAAAAAATCCCTCAACCCAACCCAACCCGGACCATGTACACCCCTAGTAGCCTACTACAATTGAATTTATTTTCAGACTGTTTTTTTAAATCTTACTGCAATTGCTTGTAATTTATACAAAGTGGTCTAATTTTGATCCCCTTGAGCTTTAATCTATCTCCTTTTGCAGCAAAAAATGGTGTGTACATTTCGTTGGTGAATGACGTAAGGCACGCTTTCGAAGGAAGCATTCTGGTGAAGGTTGATTGCACTGGGATGCATGAAAGTGATTATAAAAAGTTGGGTGCTAAACTCAAGGTTGGCATACATTTTCATCCTTTAATCTCTGCCTCGTTCTTTACTCATTGCCTTGTCTATGGTGATTTTTAGAACGTTGCTTGCATAGAAATTAGTAGTTAGAGCCAAAACTCCTCATACAGCCTACAATATCAATGGAACTGAGTTGAGCCTTGTCTATGCGATGTCGTTCTTTACTCATTGCCTTGTCTATGCGATATCGTGTAAAACTTCGAACTCGATTGCAATTGCATCTTACGATTTCTGTATGCAGCACGCTTGAAATGCTGGCTCTGTATAGTTTACTTCGGAAGCAGCAGTTTGAAGATCATACGATGATCTATTAATTATAACTACTACTTGATTTTTGTTTACAGGAATTGGTTCCTTGTGTGTTATTATCATTTGACAACGAACAGATATTGATGTGGAGGGGAAAGGATTGGAAGTCAGATATTTCAGAAGATCCTTCTGCTACACTTCCTAGTCAAGCACGCACAAATGATGGTTTGTGTTGAACTGGTTAGTATATTCCTTTCATTTAATTAAACACTCAATAATCTTTGCTCTTTTGTTACTTTTTCTAGTCGAGTCTATTGAGAATGGTGACCTCTTACATGGCAATCATCATACGATCAAAACTAGCCCAAAAATGAAGCTGTTATGGGAGAAGGCTATTGATTCGAACAAGGCATTGTTGCTAAATGAGATAGGTCTTGCTCCGGATGACCTTTTAGAGAAAGTTGAGGAGTTCGAGAGAATTTCACAAGCAACCGAGCATTCATATCCAGCATTAATCATGTCAAGTGAAGATGACAGCAGCAGCCCAGATGACAACCTTGAAAGTCAGGATCACGACCAATCTAACTACAGCTCCGACGATGATGAAGATCAGGAAGGAGACCTTTTTGATAATGTTAACCCGTCTGTACCTATGGGATCATTACCTGTTGATATCATAGCAAAGAAGCTCAGGCCTGAATAG

mRNA sequence

ATTTTCTGAAAGGCTCGTGGGAGCTCTGCCTTATCTGTCTCCTCCATCGAGAGGGAAAGAAGGTACTGTAACAATGGCAAGAATGCCGTCACTGCCAGGCCTCCACCTATTTTCCTCTCTCCCTTCAGCTCCGCCGCCGCACGATCCTTCCTCCGCTTCTACTCCTTCAACACCCATTCCAATTCCCAAATACCCTCCACCCAAATCCCGCATTCTTCGAACCAACCCTCCAAAACCACCTAATCCTGCTCTCAAAACCTTCCACCGCCGTTCCAAATACTACAAGCCTGTCAAGGACGGAGTAATTTCATCCCACGGCGATCGAGCCGTCGTCATCGGCGATTCGGGTGTCTCGTATCTACTTCCCGACGCTCCATTTGAGTTTCAGTATAGCTACTCTGAGATCCCCAAGGTCAAGCCCATTGCAATTCGTGAACCGGCGTTTCTGCCCTTTGCACCTCCGACGATGCCGAGGCCCTGGACGGGTAAAGCTCCGTTGAAGAGCTCGAAGAAGAAAATCCCTCTATTTGATTCCTTCAATCCGCCTCCTCCTGGTACGAAGGGAGTTAAGCAAGTCGAAATGCCTGGCCCGTTCCCGCTTGGCAAGTATCCGAAAGAGGGGAAAAGCAGAGAGGAGATACTTGGGGAGCCCCTCAAGAATTGGGAGATACGCATGCTGGTGAAACCCCATTTGTCACATAATCGCCAGGTTAATCTTGTTGGTGACCTTTTTTCATTTGAATTGGACGTGTTAGGAAGGGATGGACTTACCCACAATATGTTGGAATTGATCCATTCTCATTGGAAGCGGCAGCGTGTCTGTAAAGTTCGCTGCAAAGGTGTTCCCACAGTTGATATGGACAATATCTGCCATCATCTCGAGGAAAAAACAGGTGGAAAAATAATTCACCGAGTCGGTGGCGTATTATATCTTTTCCGAGGTAGAAACTACAATTATCGCACTCGCCCTCAATACCCTGTAATGCTGTGGAAACCTGCGGCCCCTGTGTATCCGAAACTTATTCAAGAAGCTCCAGAAGGTTTAACTATAGAGGAAGCTAATGAGCTAAGGATGAAAGGGAAAAATCTTTTGCCAATATGTAAATTAGCAAAAAATGGTGTGTACATTTCGTTGGTGAATGACGTAAGGCACGCTTTCGAAGGAAGCATTCTGGTGAAGGTTGATTGCACTGGGATGCATGAAAGTGATTATAAAAAGTTGGGTGCTAAACTCAAGGAATTGGTTCCTTGTGTGTTATTATCATTTGACAACGAACAGATATTGATGTGGAGGGGAAAGGATTGGAAGTCAGATATTTCAGAAGATCCTTCTGCTACACTTCCTAGTCAAGCACGCACAAATGATGTCGAGTCTATTGAGAATGGTGACCTCTTACATGGCAATCATCATACGATCAAAACTAGCCCAAAAATGAAGCTGTTATGGGAGAAGGCTATTGATTCGAACAAGGCATTGTTGCTAAATGAGATAGGTCTTGCTCCGGATGACCTTTTAGAGAAAGTTGAGGAGTTCGAGAGAATTTCACAAGCAACCGAGCATTCATATCCAGCATTAATCATGTCAAGTGAAGATGACAGCAGCAGCCCAGATGACAACCTTGAAAGTCAGGATCACGACCAATCTAACTACAGCTCCGACGATGATGAAGATCAGGAAGGAGACCTTTTTGATAATGTTAACCCGTCTGTACCTATGGGATCATTACCTGTTGATATCATAGCAAAGAAGCTCAGGCCTGAATAG

Coding sequence (CDS)

ATGGCAAGAATGCCGTCACTGCCAGGCCTCCACCTATTTTCCTCTCTCCCTTCAGCTCCGCCGCCGCACGATCCTTCCTCCGCTTCTACTCCTTCAACACCCATTCCAATTCCCAAATACCCTCCACCCAAATCCCGCATTCTTCGAACCAACCCTCCAAAACCACCTAATCCTGCTCTCAAAACCTTCCACCGCCGTTCCAAATACTACAAGCCTGTCAAGGACGGAGTAATTTCATCCCACGGCGATCGAGCCGTCGTCATCGGCGATTCGGGTGTCTCGTATCTACTTCCCGACGCTCCATTTGAGTTTCAGTATAGCTACTCTGAGATCCCCAAGGTCAAGCCCATTGCAATTCGTGAACCGGCGTTTCTGCCCTTTGCACCTCCGACGATGCCGAGGCCCTGGACGGGTAAAGCTCCGTTGAAGAGCTCGAAGAAGAAAATCCCTCTATTTGATTCCTTCAATCCGCCTCCTCCTGGTACGAAGGGAGTTAAGCAAGTCGAAATGCCTGGCCCGTTCCCGCTTGGCAAGTATCCGAAAGAGGGGAAAAGCAGAGAGGAGATACTTGGGGAGCCCCTCAAGAATTGGGAGATACGCATGCTGGTGAAACCCCATTTGTCACATAATCGCCAGGTTAATCTTGTTGGTGACCTTTTTTCATTTGAATTGGACGTGTTAGGAAGGGATGGACTTACCCACAATATGTTGGAATTGATCCATTCTCATTGGAAGCGGCAGCGTGTCTGTAAAGTTCGCTGCAAAGGTGTTCCCACAGTTGATATGGACAATATCTGCCATCATCTCGAGGAAAAAACAGGTGGAAAAATAATTCACCGAGTCGGTGGCGTATTATATCTTTTCCGAGGTAGAAACTACAATTATCGCACTCGCCCTCAATACCCTGTAATGCTGTGGAAACCTGCGGCCCCTGTGTATCCGAAACTTATTCAAGAAGCTCCAGAAGGTTTAACTATAGAGGAAGCTAATGAGCTAAGGATGAAAGGGAAAAATCTTTTGCCAATATGTAAATTAGCAAAAAATGGTGTGTACATTTCGTTGGTGAATGACGTAAGGCACGCTTTCGAAGGAAGCATTCTGGTGAAGGTTGATTGCACTGGGATGCATGAAAGTGATTATAAAAAGTTGGGTGCTAAACTCAAGGAATTGGTTCCTTGTGTGTTATTATCATTTGACAACGAACAGATATTGATGTGGAGGGGAAAGGATTGGAAGTCAGATATTTCAGAAGATCCTTCTGCTACACTTCCTAGTCAAGCACGCACAAATGATGTCGAGTCTATTGAGAATGGTGACCTCTTACATGGCAATCATCATACGATCAAAACTAGCCCAAAAATGAAGCTGTTATGGGAGAAGGCTATTGATTCGAACAAGGCATTGTTGCTAAATGAGATAGGTCTTGCTCCGGATGACCTTTTAGAGAAAGTTGAGGAGTTCGAGAGAATTTCACAAGCAACCGAGCATTCATATCCAGCATTAATCATGTCAAGTGAAGATGACAGCAGCAGCCCAGATGACAACCTTGAAAGTCAGGATCACGACCAATCTAACTACAGCTCCGACGATGATGAAGATCAGGAAGGAGACCTTTTTGATAATGTTAACCCGTCTGTACCTATGGGATCATTACCTGTTGATATCATAGCAAAGAAGCTCAGGCCTGAATAG

Protein sequence

MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFDNVNPSVPMGSLPVDIIAKKLRPE
Homology
[Close]
BLAST of Carg14329 vs. NCBI nr
Match: KAG7032293.1 (CRS2-associated factor 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 563/563 (100.00%), Postives = 563/563 (100.00%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL
Sbjct: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
           NVNPSVPMGSLPVDIIAKKLRPE
Sbjct: 541 NVNPSVPMGSLPVDIIAKKLRPE 563

[Close]
BLAST of Carg14329 vs. NCBI nr
Match: KAG6601512.1 (CRS2-associated factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 548/563 (97.34%), Postives = 549/563 (97.51%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDN QILMWRGKDWKSDISEDPS
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNAQILMWRGKDWKSDISEDPS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL
Sbjct: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHD+SNYSSDDDE QEGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEYQEGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
           NVNPSVPMGSLPVDIIAKKLRPE
Sbjct: 541 NVNPSVPMGSLPVDIIAKKLRPE 551

[Close]
BLAST of Carg14329 vs. NCBI nr
Match: XP_023542721.1 (CRS2-associated factor 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 544/563 (96.63%), Postives = 548/563 (97.34%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYP PKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLPSQARTND ESIENGDLLHGNH TIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL
Sbjct: 421 ATLPSQARTNDGESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHD+SNYSSDDDED+EGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
           NVNP+VPMGSLPVDIIAKKLRPE
Sbjct: 541 NVNPTVPMGSLPVDIIAKKLRPE 551

[Close]
BLAST of Carg14329 vs. NCBI nr
Match: XP_022956896.1 (CRS2-associated factor 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1089.3 bits (2816), Expect = 0.0e+00
Identity = 544/563 (96.63%), Postives = 547/563 (97.16%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKY PPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYLPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLPSQARTND ESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL
Sbjct: 421 ATLPSQARTNDGESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQD D+SNYSSDDDED+EGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDRDESNYSSDDDEDREGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
            VNP+VPMGSLPVDIIAKKLRPE
Sbjct: 541 IVNPTVPMGSLPVDIIAKKLRPE 551

[Close]
BLAST of Carg14329 vs. NCBI nr
Match: XP_022994755.1 (CRS2-associated factor 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 537/563 (95.38%), Postives = 543/563 (96.45%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSS STPSTPIPIP+YPPPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSTSTPSTPIPIPRYPPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR+RPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRSRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISED S
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDVS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLP Q RTND ESIENGDLLHGN+HTIKTSPKMKLLWEKAIDSNKALLLNE+GLAPDDL
Sbjct: 421 ATLPCQVRTNDGESIENGDLLHGNYHTIKTSPKMKLLWEKAIDSNKALLLNEMGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDD SSPDD LESQDHD+SNYSSDDDED EGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDD-SSPDDTLESQDHDKSNYSSDDDEDGEGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
           NVNPSVPMGSLPVDIIAKKLRPE
Sbjct: 541 NVNPSVPMGSLPVDIIAKKLRPE 550

[Close]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match: Q9LDA9 (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g23400 PE=2 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 1.1e-202
Identity = 370/576 (64.24%), Postives = 439/576 (76.22%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSAS-TPSTPIPIPKYPPPK-------SRILRTNP 60
           MA + SL  ++LFSSLPS PP  D SS +  P+ PIPIPKY P         +    TNP
Sbjct: 1   MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP 60

Query: 61  PKP-PNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEI 120
            KP  NPALK  H R++YYKPVK+GVISS GDR ++IGDSGVSY LP APFEFQ+SYSE 
Sbjct: 61  KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET 120

Query: 121 PKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMP 180
           PKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SKKKIPLFDSFNPPP G  GVK VEMP
Sbjct: 121 PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 180

Query: 181 GPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDG 240
           GP P G+YPKEG +REE+LGEPLK WE  ML+KPH+  NRQVN            LGRDG
Sbjct: 181 GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVN------------LGRDG 240

Query: 241 LTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGR 300
            THNMLELIHSHWKR+RVCKVRCKGVPTVDM+N+C  LEEKTGG+IIHRVGGV+YLFRGR
Sbjct: 241 FTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGR 300

Query: 301 NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVY 360
           NYNYRTRPQYP+MLWKPAAPVYPKLIQE PEGLT EEA+E R+KGK+L PICKL+KNGVY
Sbjct: 301 NYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVY 360

Query: 361 ISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDW 420
           +SLV DVR AFE S LVKVDC G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++W
Sbjct: 361 VSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREW 420

Query: 421 KSDISEDPSATLPSQARTNDVESIENGD-----LLHGNHHTIKTSPKMKLLWEKAIDSNK 480
           KS   ++P   +PS + TN    ++  D         N  T  +SPKM  LW++A++S+K
Sbjct: 421 KSRFVDNP--LIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSK 480

Query: 481 ALLLNEIGLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNY 540
           A++L E+ L PDDLL+KVEE E  S A EH+Y A+++S+ D ++  +D ++ +D  +  Y
Sbjct: 481 AVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAA--EDYVDEKDRSEEYY 540

Query: 541 SS-DDDEDQEGDLFDNVNPSVPMGSLPVDIIAKKLR 562
           S  DDD D E    ++++P  P+GSLPVD I +KLR
Sbjct: 541 SDIDDDFDDECSDDESLDPVGPVGSLPVDKIVRKLR 560

[Close]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match: Q657G7 (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0323300 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.4e-147
Identity = 309/617 (50.08%), Postives = 395/617 (64.02%), Query Frame = 0 

Query: 5   PSLPG-LHLFSS-LPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPP-----N 64
           PS  G  +LFSS  P  P  +DP        P+P  +  P   R     PP P      N
Sbjct: 11  PSRAGRANLFSSPPPPLPNCYDPKHRRPAPPPLPSARRLPSNRRRRHDQPPNPTTGNGGN 70

Query: 65  PALKTFHRRSKYYKPVKDGVISSHGD-------------RAVVIGDSGVSYLLPDAPFEF 124
           PA +  H R+ Y KPV     +  G+             RAVV+G SG+S+ LP APF+F
Sbjct: 71  PAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFDF 130

Query: 125 QYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPL-----KSSKKKIPLFDSFNPPP 184
           ++SYSE P+  P+AIREPAFLPFAPPTMPRPWTGKAPL     K+ ++ + L        
Sbjct: 131 RFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGEEA 190

Query: 185 PGTKGVK--QVEMPGPFPLG---KYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN 244
           P T       +E+ G   L      P +G+SREE+LGEPL   E+R LVKPH+SHNRQ+N
Sbjct: 191 PRTVSAHGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVKPHISHNRQLN 250

Query: 245 LVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTG 304
                       +GRDGLTHNMLE+IH HW+RQ +CKVRC+GVPTVDM N+C+HLEEK+G
Sbjct: 251 ------------IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSG 310

Query: 305 GKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRM 364
           GK+IHRVGGV++L+RGRNYN RTRP+YP+MLWKPA PVYPKLIQEAPEGLT EEA+E+R 
Sbjct: 311 GKVIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRR 370

Query: 365 KGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCV 424
           +GK+LLPICKLAKNG+YI LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPCV
Sbjct: 371 RGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCV 430

Query: 425 LLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTNDV----------ESIENGDLLHGN 484
           LLSFDNEQILM+RGK+WKS   +    TL  + R N+V          E+ ++ D L   
Sbjct: 431 LLSFDNEQILMFRGKEWKSRYPK--PLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVR 490

Query: 485 HHTIKTSPKMKLLWEKAIDSNKALLLNEI---GLAPDDLLEKVEEFERISQATEHSYPAL 544
                  PKM  LW  AI+S+ AL+L++     L PD LL +VE+F   SQ  EHS+PA+
Sbjct: 491 E---VLRPKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAV 550

Query: 545 IMSSEDDSSSPD-------------DNLESQDHDQSNYSSD--DDEDQEGDLFDNVNPSV 564
           +++  +D S+PD               LE Q H+ +  SSD  +D+  E D+   +  SV
Sbjct: 551 LVA--NDESNPDVLNAEYTEDEPETGTLEPQQHEFTE-SSDVAEDDHFEDDMLKRLESSV 607

[Close]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match: Q84N48 (CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.8e-145
Identity = 295/612 (48.20%), Postives = 392/612 (64.05%), Query Frame = 0 

Query: 11  HLFSSLPSAPPP----HDPSSASTPSTPIPIPKYPPPKSRILRTNPPKP----------P 70
           +LFS   ++PPP      P   S P  P+  P+   PK    + +  +P           
Sbjct: 18  NLFS---ASPPPLSNRRYPHHRSLPLPPVS-PRRRDPKKHSQQPSQEEPTDSGPTRTVTT 77

Query: 71  NPALKTFHRRSKYYKPVKDGVISSHGD-------------RAVVIGDSGVSYLLPDAPFE 130
           NPA +  H R+ Y KPV     +  G+             RAVV+G SG+S+ LP APF+
Sbjct: 78  NPAFRAAHLRTAYRKPVPPAAAAGEGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFD 137

Query: 131 FQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPL-----KSSKKKIPLFDSFNPP 190
           FQ+SYSE P+  P+AIREPAFLPFAPPTMPRPWTGKAPL     K+ ++ + L       
Sbjct: 138 FQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQE 197

Query: 191 PPGTKG----VKQVEMPGPFPLGKY-PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQV 250
            P T      + +V       L +  P +G+SREE+LGEPL   E+R LVKPH+SHNRQ+
Sbjct: 198 TPQTVSAHGIMMEVRERRKMDLARVSPGDGRSREEVLGEPLTPSEVRALVKPHISHNRQL 257

Query: 251 NLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKT 310
           N            +GRDGLTHNMLE+IH HW+RQ +CKVRC+GVPTVDM N+C+HLEEK+
Sbjct: 258 N------------IGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKS 317

Query: 311 GGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELR 370
           GGK+IHRVGGV++L+RGR+Y+ +TRP+YP+MLWKPA PVYPKLI+EAP+G T EEA+E+R
Sbjct: 318 GGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMR 377

Query: 371 MKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPC 430
            KG++LLPICKLAKNG+YI+LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPC
Sbjct: 378 RKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPC 437

Query: 431 VLLSFDNEQILMWRGKDWKSDISED-------PSATLPSQARTNDVESIENGDLLHGNHH 490
           VLLSFD+EQILM RGK+WKS  S+        P   L   +  N  + + + +       
Sbjct: 438 VLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIRE 497

Query: 491 TIKTSPKMKLLWEKAIDSNKALLLNEI---GLAPDDLLEKVEEFERISQATEHSYPALIM 550
            ++  PKM  LW+ A+DS+ ALLL++     L PD LL  VEEF   SQA EHS+PAL++
Sbjct: 498 VLR--PKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLV 557

Query: 551 SSEDDSS----------SPDDNLESQDHDQSNYSSD--DDEDQEGDLFDNVNPSVPMGSL 564
           ++ D S+           P+ ++   +  Q   S D  DDE  + D+F+ +  SVP+GSL
Sbjct: 558 TNGDASTDSLSAEYMNDEPETSVAGNEEGQLEQSPDLRDDEHFDVDMFERLESSVPLGSL 611

[Close]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match: Q5VMQ5 (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.5e-119
Identity = 213/392 (54.34%), Postives = 273/392 (69.64%), Query Frame = 0 

Query: 25  PSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISSHGDR 84
           P S    +  + +  +  P +   R   P P +PA  +  R      P+ +    + G R
Sbjct: 18  PISRLPSNLRLSLSHHKQPAAVAKRRRAPAPSHPAFSSVIRGRPKKVPIPENGEPAAGVR 77

Query: 85  AVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKS 144
              + + G++Y L  APFEFQYSY+E P+ +P+A+RE  FLPF P   PRPWTG+ PL  
Sbjct: 78  ---VTERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPK 137

Query: 145 SKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYPK-EGKSREEILGEPLKNWEIRMLV 204
           S+K++P FDSF  PPPG KGVK V+ PGPF  G  P+ +  SREE+LGEPL   E+  LV
Sbjct: 138 SRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELV 197

Query: 205 KPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMD 264
           K  L   RQ+N            +GRDGLTHNMLE IHSHWKR+RVCK++CKGV TVDMD
Sbjct: 198 KATLKTKRQLN------------IGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 257

Query: 265 NICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEG 324
           N+C  LEEK GGK+IH  GGV++LFRGRNYNYRTRP YP+MLWKPAAPVYP+L+++ P+G
Sbjct: 258 NVCQQLEEKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDG 317

Query: 325 LTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKL 384
           LT +EA ++R +G+ L PICKL KNGVY++LV  VR AFE   LV+VDC+G+++SD +K+
Sbjct: 318 LTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKI 377

Query: 385 GAKLKELVPCVLLSFDNEQILMWRGKDWKSDI 416
           GAKLK+LVPC LLSF+ E ILMWRG DWKS +
Sbjct: 378 GAKLKDLVPCTLLSFEFEHILMWRGNDWKSSL 394

[Close]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match: Q84N49 (CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-117
Identity = 223/415 (53.73%), Postives = 277/415 (66.75%), Query Frame = 0 

Query: 2   ARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPALK 61
           AR+PS      F S      P  P+S     +    P   P + R   T+     +PA  
Sbjct: 4   ARLPS----RSFLSPAQQSYPRLPASVRLCLSHHEQPPTGPKRHRRAATS-----HPAFS 63

Query: 62  TFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIRE 121
              R      P+ D    + G R   + D G+SY L  APFEFQYSY+E P+ +P+A+RE
Sbjct: 64  AAARGRAKKIPIADTDEPAAGVR---VTDRGISYRLDGAPFEFQYSYTEAPRARPVALRE 123

Query: 122 PAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYPK 181
             F+PF P   PRPWTG+ PL  S+K++P FDSF  P PG KGVK V+ PGPF  G  P+
Sbjct: 124 APFMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLPAPGKKGVKPVQSPGPFLAGMEPR 183

Query: 182 -EGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 241
            +  SRE+ILGEPL   E+  LVK  L   RQ+N            +GRDGLTHNMLE I
Sbjct: 184 YQSVSREDILGEPLTKEEVSELVKGSLKSKRQLN------------MGRDGLTHNMLENI 243

Query: 242 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 301
           HSHWKR+RVCK++CKGV T+DMDNICH LEEK GGK+IHR GGV++LFRGRNYNYRTRP 
Sbjct: 244 HSHWKRKRVCKIKCKGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPC 303

Query: 302 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 361
           +P+MLWKP APVYP+L+ + P GLT +EA E+R +G  L PICKL KNGVY +LVN VR 
Sbjct: 304 FPLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVRE 363

Query: 362 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDI 416
           AFE   LV+VDC+G+++SD +K+GAKLK+LVPC+LLSF+ E ILMWRG DWKS +
Sbjct: 364 AFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSL 394

[Close]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match: A0A6J1GXR4 (CRS2-associated factor 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458445 PE=4 SV=1)

HSP 1 Score: 1089.3 bits (2816), Expect = 0.0e+00
Identity = 544/563 (96.63%), Postives = 547/563 (97.16%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKY PPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYLPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLPSQARTND ESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL
Sbjct: 421 ATLPSQARTNDGESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQD D+SNYSSDDDED+EGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDRDESNYSSDDDEDREGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
            VNP+VPMGSLPVDIIAKKLRPE
Sbjct: 541 IVNPTVPMGSLPVDIIAKKLRPE 551

[Close]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match: A0A6J1K284 (CRS2-associated factor 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490390 PE=4 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 537/563 (95.38%), Postives = 543/563 (96.45%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPAL 60
           MARMPSLPGLHLFSSLPSAPPPHDPSS STPSTPIPIP+YPPPKSRILRTNPPKPPNPAL
Sbjct: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSTSTPSTPIPIPRYPPPKSRILRTNPPKPPNPAL 60

Query: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120
           KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR
Sbjct: 61  KTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIR 120

Query: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180
           EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP
Sbjct: 121 EPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYP 180

Query: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELI 240
           KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLELI
Sbjct: 181 KEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLELI 240

Query: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 300
           HSHWKRQRVCKVRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR+RPQ
Sbjct: 241 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRSRPQ 300

Query: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360
           YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH
Sbjct: 301 YPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRH 360

Query: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPS 420
           AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISED S
Sbjct: 361 AFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDVS 420

Query: 421 ATLPSQARTNDVESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDL 480
           ATLP Q RTND ESIENGDLLHGN+HTIKTSPKMKLLWEKAIDSNKALLLNE+GLAPDDL
Sbjct: 421 ATLPCQVRTNDGESIENGDLLHGNYHTIKTSPKMKLLWEKAIDSNKALLLNEMGLAPDDL 480

Query: 481 LEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQEGDLFD 540
           LEKVEEFERISQATEHSYPALIMSSEDD SSPDD LESQDHD+SNYSSDDDED EGDLFD
Sbjct: 481 LEKVEEFERISQATEHSYPALIMSSEDD-SSPDDTLESQDHDKSNYSSDDDEDGEGDLFD 540

Query: 541 NVNPSVPMGSLPVDIIAKKLRPE 564
           NVNPSVPMGSLPVDIIAKKLRPE
Sbjct: 541 NVNPSVPMGSLPVDIIAKKLRPE 550

[Close]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match: A0A5A7ST68 (RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G003020 PE=4 SV=1)

HSP 1 Score: 977.2 bits (2525), Expect = 2.8e-281
Identity = 493/569 (86.64%), Postives = 522/569 (91.74%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRT-NPPKPPNPA 60
           MA +PSLPGL LFSSLPSAPPPH+PS  S+PSTPIPIPKYPPPKSR LRT NPPK PNPA
Sbjct: 48  MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 107

Query: 61  LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
           LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 108 LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 167

Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
           REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 168 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 227

Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLEL 240
           PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLEL
Sbjct: 228 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLEL 287

Query: 241 IHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300
           IHSHWKRQRVCKVRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRP
Sbjct: 288 IHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 347

Query: 301 QYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVR 360
           QYPVMLWKPAAPVYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVR
Sbjct: 348 QYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVR 407

Query: 361 HAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDP 420
           HAFEGSILVK+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D 
Sbjct: 408 HAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDR 467

Query: 421 SATLPSQARTNDV-----ESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIG 480
           SA LPS+A +ND      ES+EN DLL+GNHHTIKTSPKMKLLWE+AIDSNKAL+L+EIG
Sbjct: 468 SAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIG 527

Query: 481 LAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQ 540
           LAPD+LLE+VEEFERISQATEHSYPA I SSE + SSP D+ ESQDH ++NY+SDDD  +
Sbjct: 528 LAPDELLERVEEFERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGR 587

Query: 541 EGDLFDNVNPSVPMGSLPVDIIAKKLRPE 564
           E DLFDNV+P VP+GSLPVDIIAKKL  E
Sbjct: 588 EEDLFDNVDPLVPLGSLPVDIIAKKLSSE 603

[Close]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match: A0A5D3CUP7 (RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001140 PE=4 SV=1)

HSP 1 Score: 977.2 bits (2525), Expect = 2.8e-281
Identity = 493/569 (86.64%), Postives = 522/569 (91.74%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRT-NPPKPPNPA 60
           MA +PSLPGL LFSSLPSAPPPH+PS  S+PSTPIPIPKYPPPKSR LRT NPPK PNPA
Sbjct: 1   MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 60

Query: 61  LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
           LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 61  LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 120

Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
           REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 180

Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLEL 240
           PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLEL
Sbjct: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLEL 240

Query: 241 IHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300
           IHSHWKRQRVCKVRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRP
Sbjct: 241 IHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300

Query: 301 QYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVR 360
           QYPVMLWKPAAPVYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVR
Sbjct: 301 QYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVR 360

Query: 361 HAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDP 420
           HAFEGSILVK+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D 
Sbjct: 361 HAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDR 420

Query: 421 SATLPSQARTNDV-----ESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIG 480
           SA LPS+A +ND      ES+EN DLL+GNHHTIKTSPKMKLLWE+AIDSNKAL+L+EIG
Sbjct: 421 SAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIG 480

Query: 481 LAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQ 540
           LAPD+LLE+VEEFERISQATEHSYPA I SSE + SSP D+ ESQDH ++NY+SDDD  +
Sbjct: 481 LAPDELLERVEEFERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGR 540

Query: 541 EGDLFDNVNPSVPMGSLPVDIIAKKLRPE 564
           E DLFDNV+P VP+GSLPVDIIAKKL  E
Sbjct: 541 EEDLFDNVDPLVPLGSLPVDIIAKKLSSE 556

[Close]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match: E5GBI3 (RNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 977.2 bits (2525), Expect = 2.8e-281
Identity = 493/569 (86.64%), Postives = 522/569 (91.74%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPPPKSRILRT-NPPKPPNPA 60
           MA +PSLPGL LFSSLPSAPPPH+PS  S+PSTPIPIPKYPPPKSR LRT NPPK PNPA
Sbjct: 48  MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 107

Query: 61  LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
           LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 108 LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 167

Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
           REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 168 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 227

Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLEL 240
           PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN            LGRDGLTHNMLEL
Sbjct: 228 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN------------LGRDGLTHNMLEL 287

Query: 241 IHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300
           IHSHWKRQRVCKVRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRP
Sbjct: 288 IHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 347

Query: 301 QYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVR 360
           QYPVMLWKPAAPVYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVR
Sbjct: 348 QYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVR 407

Query: 361 HAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDP 420
           HAFEGSILVK+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D 
Sbjct: 408 HAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDR 467

Query: 421 SATLPSQARTNDV-----ESIENGDLLHGNHHTIKTSPKMKLLWEKAIDSNKALLLNEIG 480
           SA LPS+A +ND      ES+EN DLL+GNHHTIKTSPKMKLLWE+AIDSNKAL+L+EIG
Sbjct: 468 SAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIG 527

Query: 481 LAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNYSSDDDEDQ 540
           LAPD+LLE+VEEFERISQATEHSYPA I SSE + SSP D+ ESQDH ++NY+SDDD  +
Sbjct: 528 LAPDELLERVEEFERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGR 587

Query: 541 EGDLFDNVNPSVPMGSLPVDIIAKKLRPE 564
           E DLFDNV+P VP+GSLPVDIIAKKL  E
Sbjct: 588 EEDLFDNVDPLVPLGSLPVDIIAKKLSSE 603

[Close]
BLAST of Carg14329 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 707.6 bits (1825), Expect = 8.0e-204
Identity = 370/576 (64.24%), Postives = 439/576 (76.22%), Query Frame = 0 

Query: 1   MARMPSLPGLHLFSSLPSAPPPHDPSSAS-TPSTPIPIPKYPPPK-------SRILRTNP 60
           MA + SL  ++LFSSLPS PP  D SS +  P+ PIPIPKY P         +    TNP
Sbjct: 1   MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP 60

Query: 61  PKP-PNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEI 120
            KP  NPALK  H R++YYKPVK+GVISS GDR ++IGDSGVSY LP APFEFQ+SYSE 
Sbjct: 61  KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET 120

Query: 121 PKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMP 180
           PKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SKKKIPLFDSFNPPP G  GVK VEMP
Sbjct: 121 PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 180

Query: 181 GPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDG 240
           GP P G+YPKEG +REE+LGEPLK WE  ML+KPH+  NRQVN            LGRDG
Sbjct: 181 GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVN------------LGRDG 240

Query: 241 LTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGR 300
            THNMLELIHSHWKR+RVCKVRCKGVPTVDM+N+C  LEEKTGG+IIHRVGGV+YLFRGR
Sbjct: 241 FTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGR 300

Query: 301 NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVY 360
           NYNYRTRPQYP+MLWKPAAPVYPKLIQE PEGLT EEA+E R+KGK+L PICKL+KNGVY
Sbjct: 301 NYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVY 360

Query: 361 ISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDW 420
           +SLV DVR AFE S LVKVDC G+  SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++W
Sbjct: 361 VSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREW 420

Query: 421 KSDISEDPSATLPSQARTNDVESIENGD-----LLHGNHHTIKTSPKMKLLWEKAIDSNK 480
           KS   ++P   +PS + TN    ++  D         N  T  +SPKM  LW++A++S+K
Sbjct: 421 KSRFVDNP--LIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSK 480

Query: 481 ALLLNEIGLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDQSNY 540
           A++L E+ L PDDLL+KVEE E  S A EH+Y A+++S+ D ++  +D ++ +D  +  Y
Sbjct: 481 AVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAA--EDYVDEKDRSEEYY 540

Query: 541 SS-DDDEDQEGDLFDNVNPSVPMGSLPVDIIAKKLR 562
           S  DDD D E    ++++P  P+GSLPVD I +KLR
Sbjct: 541 SDIDDDFDDECSDDESLDPVGPVGSLPVDKIVRKLR 560

[Close]
BLAST of Carg14329 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 420.6 bits (1080), Expect = 2.0e-117
Identity = 218/406 (53.69%), Postives = 274/406 (67.49%), Query Frame = 0 

Query: 23  HDPSSASTPSTPIPIPKYPPPKSRILRTNPPKPPNPALKTFHRRSKYYKP---------- 82
           HD  +A+        PK  P +SR   + P     P      RRSKY KP          
Sbjct: 71  HDSEAAAAE------PKTSPFRSRGTPSLPSARSIPG-----RRSKYSKPDSGPNRPKNK 130

Query: 83  --VKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIREPAFLPFAPP 142
             V D          V + + G++Y++  APFEF+YSY+E PKVKP+ +REPA+ PF P 
Sbjct: 131 PRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPT 190

Query: 143 TMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKSREEIL 202
           TM RPWTG+APL  S+K    FDSF  PP G KG+K V+ PGPF  G  P+   S+EEIL
Sbjct: 191 TMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEIL 250

Query: 203 GEPLKNWEIRMLVKPHLSHNRQVNLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVC 262
           GEPL   E+R LV   L   RQ+N            +GRDGLTHNML  IH  WKR+RVC
Sbjct: 251 GEPLTKEEVRELVTSCLKTTRQLN------------MGRDGLTHNMLNNIHDLWKRRRVC 310

Query: 263 KVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 322
           K++CKGV TVDMDN+C  LEEK GGK+I+R GGVL+LFRGRNYN+RTRP++P+MLWKP A
Sbjct: 311 KIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVA 370

Query: 323 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 382
           PVYP+LIQ+ PEGLT +EA  +R KG+ L+PICKL KNGVY  LV +V+ AFE   LV++
Sbjct: 371 PVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRI 430

Query: 383 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDIS 417
           DC GM  SD++K+GAKLK+LVPCVL+SF+NEQIL+WRG++WKS ++
Sbjct: 431 DCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLT 453

[Close]
BLAST of Carg14329 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 266.9 bits (681), Expect = 3.6e-71
Identity = 142/330 (43.03%), Postives = 197/330 (59.70%), Query Frame = 0 

Query: 92  GVSYLLPDAPFEFQYSYSE-IPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIP 151
           GV  +  D PF+F++SY+E    V+PI +REP + PF P  + R WTG            
Sbjct: 75  GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCA--------- 134

Query: 152 LFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVK--PHLS 211
              + NP      GV+  ++          K  K RE+I G  L   E + LV+      
Sbjct: 135 --PAVNPKVESVDGVEDPKLE--------EKRRKVREKIQGASLTEAERKFLVELCQRNK 194

Query: 212 HNRQVNLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHH 271
             RQVN            LGRDGLTHNML  +++HWK     +V+C GVPT+DM N+  H
Sbjct: 195 TKRQVN------------LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFH 254

Query: 272 LEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEE 331
           LE+KT G+++ +  G L L+RGRNY+ + RP+ P+MLWKP  PVYP+LI+   +GL+I+E
Sbjct: 255 LEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDE 314

Query: 332 ANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLK 391
              +R KG  +  + KLAKNG Y SLV  VR AF  S LV++DC G+   DYKK+GAKL+
Sbjct: 315 TKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLR 373

Query: 392 ELVPCVLLSFDNEQILMWRGKDWKSDISED 419
           +LVPC+L++FD EQ+++WRGKD+K    +D
Sbjct: 375 DLVPCILVTFDKEQVVIWRGKDYKPPKEDD 373

[Close]
BLAST of Carg14329 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 253.8 bits (647), Expect = 3.2e-67
Identity = 146/374 (39.04%), Postives = 209/374 (55.88%), Query Frame = 0 

Query: 40  YPPPKSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPD 99
           Y PP S +  + P KPP        +  K  K  K    S       ++ D  +  ++ D
Sbjct: 34  YDPPFSPL--SKPTKPP--------KEKKKQKTKKQDQSSE------LVNDLKIP-VISD 93

Query: 100 APFEFQYSYSEI-PKVKPIAIREP-AFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNP 159
            PF+F+YSYSE  P+++PI  REP  F PF P  + R WTG   L S             
Sbjct: 94  LPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALAS------------- 153

Query: 160 PPPGTKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVK--PHLSHNRQVNL 219
             P     + VE                R  +LGE L   E+  L++   H    RQ+N 
Sbjct: 154 --PEIDQSQWVE---------------ERARVLGETLTEDEVTELIERYRHSDCTRQIN- 213

Query: 220 VGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGG 279
                      LG+ G+THNM++ IH+HWK+    +++C GVPT+DMDNIC HLEEK+GG
Sbjct: 214 -----------LGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGG 273

Query: 280 KIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMK 339
           KI++R   +L L+RGRNY+ ++RP  P+MLWKP  P+YP+L++   +GL  EE  E+R +
Sbjct: 274 KIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNR 333

Query: 340 GKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVL 399
           G +   + KL +NGVY+++V  VR  FE   +V++DCT +  SD K++G KLKE+VPCV 
Sbjct: 334 GLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVP 348

Query: 400 LSFDNEQILMWRGK 410
           + F +EQI++WRGK
Sbjct: 394 ILFKDEQIILWRGK 348

[Close]
BLAST of Carg14329 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-44
Identity = 103/264 (39.02%), Postives = 144/264 (54.55%), Query Frame = 0 

Query: 92  GVSYLLPDAPFEFQYSYSE-IPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIP 151
           GV  +  D PF+F++SY+E    V+PI +REP + PF P  + R WTG            
Sbjct: 75  GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCA--------- 134

Query: 152 LFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVK--PHLS 211
              + NP      GV+  ++          K  K RE+I G  L   E + LV+      
Sbjct: 135 --PAVNPKVESVDGVEDPKLE--------EKRRKVREKIQGASLTEAERKFLVELCQRNK 194

Query: 212 HNRQVNLVGDLFSFELDVLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHH 271
             RQVN            LGRDGLTHNML  +++HWK     +V+C GVPT+DM N+  H
Sbjct: 195 TKRQVN------------LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFH 254

Query: 272 LEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEE 331
           LE+KT G+++ +  G L L+RGRNY+ + RP+ P+MLWKP  PVYP+LI+   +GL+I+E
Sbjct: 255 LEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDE 304

Query: 332 ANELRMKGKNLLPICKLAKNGVYI 353
              +R KG   L +  L K G Y+
Sbjct: 315 TKAMRKKG---LAVPALTKLGPYL 304

The following BLAST results are available for this feature:
BLAST of Carg14329 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7032293.10.0e+00100.00CRS2-associated factor 2, chloroplastic [Cucurbita argyrosperma subsp. argyrospe... [more]
KAG6601512.10.0e+0097.34CRS2-associated factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. ... [more]
XP_023542721.10.0e+0096.63CRS2-associated factor 2, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022956896.10.0e+0096.63CRS2-associated factor 2, chloroplastic [Cucurbita moschata][more]
XP_022994755.10.0e+0095.38CRS2-associated factor 2, chloroplastic [Cucurbita maxima][more]
BLAST of Carg14329 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LDA91.1e-20264.24CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g2... [more]
Q657G71.4e-14750.08CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... [more]
Q84N482.8e-14548.20CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1[more]
Q5VMQ53.5e-11954.34CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... [more]
Q84N491.1e-11753.73CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1[more]
BLAST of Carg14329 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXR40.0e+0096.63CRS2-associated factor 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1K2840.0e+0095.38CRS2-associated factor 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
A0A5A7ST682.8e-28186.64RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G0... [more]
A0A5D3CUP72.8e-28186.64RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0... [more]
E5GBI32.8e-28186.64RNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
BLAST of Carg14329 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G23400.18.0e-20464.24RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT2G20020.12.0e-11753.69RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT4G31010.13.6e-7143.03RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT5G54890.13.2e-6739.04RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT4G31010.21.7e-4439.02RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 324..407
e-value: 1.4E-8
score: 44.5
coord: 194..289
e-value: 9.1E-13
score: 58.4
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 324..407
e-value: 3.1E-10
score: 40.1
coord: 227..289
e-value: 4.6E-17
score: 61.9
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 192..300
score: 15.417979
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 322..418
score: 15.822919
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 224..301
e-value: 3.5E-17
score: 64.2
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 324..420
e-value: 2.0E-15
score: 58.6
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 226..299
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 324..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..552
NoneNo IPR availablePANTHERPTHR46247:SF3CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTICcoord: 3..561
IPR044599CRS2-associated factor, plantPANTHERPTHR46247CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTICcoord: 3..561

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14329-RACarg14329-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0006397 mRNA processing
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003723 RNA binding