Homology
BLAST of Carg14243 vs. NCBI nr
Match:
KAG7031310.1 (ATP-dependent RNA helicase DEAH12, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 3556.9 bits (9222), Expect = 0.0e+00
Identity = 1742/1742 (100.00%), Postives = 1742/1742 (100.00%), Query Frame = 0
Query: 1 MKSSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA 60
MKSSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA
Sbjct: 1 MKSSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA 60
Query: 61 NFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFW 120
NFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFW
Sbjct: 61 NFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFW 120
Query: 121 ELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKV 180
ELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKV
Sbjct: 121 ELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKV 180
Query: 181 QIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL 240
QIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL
Sbjct: 181 QIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL 240
Query: 241 SDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGET 300
SDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGET
Sbjct: 241 SDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGET 300
Query: 301 GSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFS 360
GSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFS
Sbjct: 301 GSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFS 360
Query: 361 SAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRV 420
SAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRV
Sbjct: 361 SAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRV 420
Query: 421 DLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDV 480
DLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDV
Sbjct: 421 DLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDV 480
Query: 481 VRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHP 540
VRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHP
Sbjct: 481 VRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHP 540
Query: 541 GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGR 600
GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGR
Sbjct: 541 GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGR 600
Query: 601 AGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSA 660
AGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSA
Sbjct: 601 AGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSA 660
Query: 661 EAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL 720
EAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL
Sbjct: 661 EAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL 720
Query: 721 AVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCW 780
AVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCW
Sbjct: 721 AVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCW 780
Query: 781 ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSEN 840
ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSEN
Sbjct: 781 ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSEN 840
Query: 841 VAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDV 900
VAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDV
Sbjct: 841 VAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDV 900
Query: 901 DALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDD 960
DALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDD
Sbjct: 901 DALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDD 960
Query: 961 CIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVA 1020
CIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVA
Sbjct: 961 CIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVA 1020
Query: 1021 LLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDD 1080
LLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDD
Sbjct: 1021 LLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDD 1080
Query: 1081 DDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLW 1140
DDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLW
Sbjct: 1081 DDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLW 1140
Query: 1141 PRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEAD 1200
PRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEAD
Sbjct: 1141 PRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEAD 1200
Query: 1201 IFNILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQ 1260
IFNILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQ
Sbjct: 1201 IFNILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQ 1260
Query: 1261 PQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIF 1320
PQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIF
Sbjct: 1261 PQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIF 1320
Query: 1321 RVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKII 1380
RVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKII
Sbjct: 1321 RVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKII 1380
Query: 1381 DHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQ 1440
DHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQ
Sbjct: 1381 DHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQ 1440
Query: 1441 SLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVH 1500
SLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVH
Sbjct: 1441 SLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVH 1500
Query: 1501 GSKDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLL 1560
GSKDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLL
Sbjct: 1501 GSKDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLL 1560
Query: 1561 EQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRF 1620
EQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRF
Sbjct: 1561 EQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRF 1620
Query: 1621 CPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLD 1680
CPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLD
Sbjct: 1621 CPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLD 1680
Query: 1681 EWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMA 1740
EWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMA
Sbjct: 1681 EWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMA 1740
Query: 1741 FV 1743
FV
Sbjct: 1741 FV 1742
BLAST of Carg14243 vs. NCBI nr
Match:
KAG6600671.1 (ATP-dependent RNA helicase DEAH12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 3546.5 bits (9195), Expect = 0.0e+00
Identity = 1736/1738 (99.88%), Postives = 1736/1738 (99.88%), Query Frame = 0
Query: 5 SSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVI 64
SSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVI
Sbjct: 91 SSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVI 150
Query: 65 DLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRL 124
DLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRL
Sbjct: 151 DLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRL 210
Query: 125 DGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDR 184
DGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDR
Sbjct: 211 DGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDR 270
Query: 185 ISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIE 244
ISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIE
Sbjct: 271 ISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIE 330
Query: 245 DVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGK 304
DVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGK
Sbjct: 331 DVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGK 390
Query: 305 STQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQ 364
STQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQ
Sbjct: 391 STQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQ 450
Query: 365 FKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHL 424
FKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHL
Sbjct: 451 FKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHL 510
Query: 425 IIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMA 484
IIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMA
Sbjct: 511 IIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMA 570
Query: 485 SEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRK 544
SEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRK
Sbjct: 571 SEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRK 630
Query: 545 VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRT 604
VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRT
Sbjct: 631 VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRT 690
Query: 605 EPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVD 664
EPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVD
Sbjct: 691 EPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVD 750
Query: 665 MAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLM 724
MAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLM
Sbjct: 751 MAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLM 810
Query: 725 TNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSI 784
TNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSI
Sbjct: 811 TNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSI 870
Query: 785 NAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMF 844
NAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMF
Sbjct: 871 NAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMF 930
Query: 845 TGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALS 904
TGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALS
Sbjct: 931 TGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALS 990
Query: 905 TISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGI 964
TISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGI
Sbjct: 991 TISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGI 1050
Query: 965 EVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALLGS 1024
EVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSP VALLGS
Sbjct: 1051 EVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALLGS 1110
Query: 1025 GAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKE 1084
GAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSG DDDDKE
Sbjct: 1111 GAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGLDDDDKE 1170
Query: 1085 RGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRL 1144
RGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRL
Sbjct: 1171 RGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRL 1230
Query: 1145 SKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNI 1204
SKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNI
Sbjct: 1231 SKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNI 1290
Query: 1205 LRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPK 1264
LRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPK
Sbjct: 1291 LRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPK 1350
Query: 1265 DFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIK 1324
DFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIK
Sbjct: 1351 DFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIK 1410
Query: 1325 CQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHAS 1384
CQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHAS
Sbjct: 1411 CQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHAS 1470
Query: 1385 VTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQT 1444
VTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQT
Sbjct: 1471 VTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQT 1530
Query: 1445 LHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKD 1504
LHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKD
Sbjct: 1531 LHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKD 1590
Query: 1505 LKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFE 1564
LKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFE
Sbjct: 1591 LKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFE 1650
Query: 1565 SAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSP 1624
SAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSP
Sbjct: 1651 SAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSP 1710
Query: 1625 DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK 1684
DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK
Sbjct: 1711 DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK 1770
Query: 1685 GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1771 GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1828
BLAST of Carg14243 vs. NCBI nr
Match:
XP_022943236.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 3526.5 bits (9143), Expect = 0.0e+00
Identity = 1723/1740 (99.02%), Postives = 1731/1740 (99.48%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 62
SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF
Sbjct: 4 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 63
Query: 63 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 122
VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL
Sbjct: 64 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 123
Query: 123 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 182
RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKV+DWQKKRDLVKVQI
Sbjct: 124 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVQDWQKKRDLVKVQI 183
Query: 183 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 242
DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL D
Sbjct: 184 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELPD 243
Query: 243 IEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 302
EDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS
Sbjct: 244 SEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 303
Query: 303 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSA 362
GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYP+FSSA
Sbjct: 304 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSA 363
Query: 363 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 422
QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLM RVDL
Sbjct: 364 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMERVDL 423
Query: 423 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 482
HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR
Sbjct: 424 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 483
Query: 483 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 542
MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK
Sbjct: 484 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 543
Query: 543 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 602
RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG
Sbjct: 544 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 603
Query: 603 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 662
RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA
Sbjct: 604 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 663
Query: 663 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 722
VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLIL CFNCRVRREGVVLAV
Sbjct: 664 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILGCFNCRVRREGVVLAV 723
Query: 723 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 782
LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN
Sbjct: 724 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 783
Query: 783 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 842
SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA
Sbjct: 784 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 843
Query: 843 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 902
MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA
Sbjct: 844 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 903
Query: 903 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCI 962
LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL SLTSHVRKVFSDDC+
Sbjct: 904 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCM 963
Query: 963 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALL 1022
GIEVNINQNE+LLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSP VALL
Sbjct: 964 GIEVNINQNEVLLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALL 1023
Query: 1023 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1082
GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD
Sbjct: 1024 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1083
Query: 1083 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPR 1142
KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKV WPR
Sbjct: 1084 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPR 1143
Query: 1143 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1202
RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF
Sbjct: 1144 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1203
Query: 1203 NILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1262
NILRSATDR+ILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ
Sbjct: 1204 NILRSATDRKILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1263
Query: 1263 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1322
PKDFYMRAAITFDGRLHLEAAKALEYLEGKSL +CFPWQKIKCQQLFHSTLSCTIPIFRV
Sbjct: 1264 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLPICFPWQKIKCQQLFHSTLSCTIPIFRV 1323
Query: 1323 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1382
IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH
Sbjct: 1324 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1383
Query: 1383 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1442
ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL
Sbjct: 1384 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1443
Query: 1443 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1502
QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS
Sbjct: 1444 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1503
Query: 1503 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQ 1562
KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL+EQ
Sbjct: 1504 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQ 1563
Query: 1563 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1622
FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP
Sbjct: 1564 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1623
Query: 1623 SPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1682
SPDCPSVYRVASP+TCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW
Sbjct: 1624 SPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1683
Query: 1683 RKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1742
RKGKENVKNCP CGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1684 RKGKENVKNCPACGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
BLAST of Carg14243 vs. NCBI nr
Match:
XP_023531305.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 3524.2 bits (9137), Expect = 0.0e+00
Identity = 1723/1737 (99.19%), Postives = 1727/1737 (99.42%), Query Frame = 0
Query: 6 SSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVID 65
SSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVID
Sbjct: 3 SSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVID 62
Query: 66 LVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLD 125
LVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLD
Sbjct: 63 LVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLD 122
Query: 126 GLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDRI 185
GLHDFTPILKPRINLPSDADELHDRLRNLFA RIQRLMDGEKVRDWQKKRDLVKVQIDRI
Sbjct: 123 GLHDFTPILKPRINLPSDADELHDRLRNLFAGRIQRLMDGEKVRDWQKKRDLVKVQIDRI 182
Query: 186 SHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIED 245
SHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIED
Sbjct: 183 SHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIED 242
Query: 246 VGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKS 305
VGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKS
Sbjct: 243 VGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKS 302
Query: 306 TQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQF 365
TQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYP+FSSAQQF
Sbjct: 303 TQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSAQQF 362
Query: 366 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI 425
KSKIIY TDHCLLQHYMNDKKLS VSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI
Sbjct: 363 KSKIIYTTDHCLLQHYMNDKKLSGVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI 422
Query: 426 IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS 485
IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS
Sbjct: 423 IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS 482
Query: 486 EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV 545
EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV
Sbjct: 483 EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV 542
Query: 546 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE 605
IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE
Sbjct: 543 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE 602
Query: 606 PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 665
PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM
Sbjct: 603 PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 662
Query: 666 AIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT 725
AIRNLVQLGAITLN NVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT
Sbjct: 663 AIRNLVQLGAITLNGNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT 722
Query: 726 NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN 785
NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN
Sbjct: 723 NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN 782
Query: 786 AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT 845
AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT
Sbjct: 783 AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT 842
Query: 846 GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST 905
GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST
Sbjct: 843 GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST 902
Query: 906 ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGIE 965
ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL SLTSHVRKVFSDDCIGIE
Sbjct: 903 ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCIGIE 962
Query: 966 VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALLGSG 1025
VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSP VALLGSG
Sbjct: 963 VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALLGSG 1022
Query: 1026 AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKER 1085
AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTIC IQKVPCSGQDDDDKER
Sbjct: 1023 AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICNIQKVPCSGQDDDDKER 1082
Query: 1086 GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRLS 1145
GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKV WPRRLS
Sbjct: 1083 GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPRRLS 1142
Query: 1146 KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL 1205
KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL
Sbjct: 1143 KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL 1202
Query: 1206 RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD 1265
RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD
Sbjct: 1203 RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD 1262
Query: 1266 FYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKC 1325
FYMRAAI FDGRLHLEAAKALEYLEGKSL VCFPWQKIKCQQLFHSTLSCTIPIFRVIKC
Sbjct: 1263 FYMRAAINFDGRLHLEAAKALEYLEGKSLPVCFPWQKIKCQQLFHSTLSCTIPIFRVIKC 1322
Query: 1326 QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV 1385
QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV
Sbjct: 1323 QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV 1382
Query: 1386 TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL 1445
TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL
Sbjct: 1383 TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL 1442
Query: 1446 HERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL 1505
H+RKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL
Sbjct: 1443 HDRKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL 1502
Query: 1506 KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFES 1565
KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL+EQFES
Sbjct: 1503 KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQFES 1562
Query: 1566 AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSPD 1625
AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSPD
Sbjct: 1563 AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCPSPD 1622
Query: 1626 CPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRKG 1685
CPSVYRVASP+TCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRKG
Sbjct: 1623 CPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRKG 1682
Query: 1686 KENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
KENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1683 KENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1739
BLAST of Carg14243 vs. NCBI nr
Match:
XP_022969963.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 3506.5 bits (9091), Expect = 0.0e+00
Identity = 1713/1740 (98.45%), Postives = 1727/1740 (99.25%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 62
SSSSSSS+TVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF
Sbjct: 6 SSSSSSSTTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 65
Query: 63 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 122
VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMV FWEL
Sbjct: 66 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVTFWEL 125
Query: 123 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 182
RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI
Sbjct: 126 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 185
Query: 183 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 242
DRISHSLRKPLGIATQFEL+EKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD
Sbjct: 186 DRISHSLRKPLGIATQFELKEKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 245
Query: 243 IEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 302
EDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQI+SQQVMVLIGETGS
Sbjct: 246 SEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIHSQQVMVLIGETGS 305
Query: 303 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSA 362
GKSTQLVQFLADSGLSSS+SIVCTQPRKISA SLAHRVREESRGCYDDDCISCYP+FSSA
Sbjct: 306 GKSTQLVQFLADSGLSSSESIVCTQPRKISATSLAHRVREESRGCYDDDCISCYPSFSSA 365
Query: 363 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 422
QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL
Sbjct: 366 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 425
Query: 423 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 482
HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPC VASYVTDVVR
Sbjct: 426 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCTVASYVTDVVR 485
Query: 483 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 542
MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK
Sbjct: 486 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 545
Query: 543 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 602
RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG
Sbjct: 546 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 605
Query: 603 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 662
RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA
Sbjct: 606 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 665
Query: 663 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 722
VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV
Sbjct: 666 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 725
Query: 723 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 782
LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN
Sbjct: 726 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 785
Query: 783 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 842
SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA
Sbjct: 786 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 845
Query: 843 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 902
MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA
Sbjct: 846 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 905
Query: 903 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCI 962
LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL SLTSHVRKVFSDDCI
Sbjct: 906 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCI 965
Query: 963 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALL 1022
GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGN GSP VALL
Sbjct: 966 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNDGSPPVALL 1025
Query: 1023 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1082
GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD
Sbjct: 1026 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1085
Query: 1083 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPR 1142
KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKV WPR
Sbjct: 1086 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPR 1145
Query: 1143 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1202
RLSKGFAVVKCNSYDVSFLVNDFSNLL GERFLRCEPSIKYNDCVTLSGIDKELSEADIF
Sbjct: 1146 RLSKGFAVVKCNSYDVSFLVNDFSNLLNGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1205
Query: 1203 NILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1262
N+LRSATDR+ILDLFLVRENPV+NPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ
Sbjct: 1206 NVLRSATDRKILDLFLVRENPVSNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1265
Query: 1263 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1322
PKDFYMRAAITFDGRLHLEAAKALEYLEGK+L VCFPWQKIKCQQLFHSTLSCTIPIFRV
Sbjct: 1266 PKDFYMRAAITFDGRLHLEAAKALEYLEGKALPVCFPWQKIKCQQLFHSTLSCTIPIFRV 1325
Query: 1323 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1382
IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH
Sbjct: 1326 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1385
Query: 1383 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1442
AS+TPTVLQHL SRDGFDLINLLQRENEVYIL DRQRLSLRIFGASENVAAAERKLIQSL
Sbjct: 1386 ASLTPTVLQHLNSRDGFDLINLLQRENEVYILVDRQRLSLRIFGASENVAAAERKLIQSL 1445
Query: 1443 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1502
QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS
Sbjct: 1446 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1505
Query: 1503 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQ 1562
KDLK +VETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL+EQ
Sbjct: 1506 KDLKHDVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQ 1565
Query: 1563 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1622
FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP
Sbjct: 1566 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1625
Query: 1623 SPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1682
SPDCPSVYRVASP+TCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW
Sbjct: 1626 SPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1685
Query: 1683 RKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1742
RKG+ENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1686 RKGRENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1745
BLAST of Carg14243 vs. ExPASy Swiss-Prot
Match:
F4KGU4 (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)
HSP 1 Score: 1901.3 bits (4924), Expect = 0.0e+00
Identity = 957/1759 (54.41%), Postives = 1259/1759 (71.57%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCN-RPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA- 62
S SSS++ R SS N RP++ Q + PN P + + SG RA
Sbjct: 22 SHSSSTNRYNSRSAQSSPPLNHRPTWNQQHSQYPNSNFPPNYRRDRNPSSGYSPPVTRAR 81
Query: 63 -NFVIDLVLDHRGVA-----------KCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQ 122
NF++ L+ H A K +E L C ++ VPQ G + F+Q
Sbjct: 82 PNFIVQLL--HPAAANSDTKLCFSTKKQEIESLALLCEIPEESIHVPQFGCIAGSFSFRQ 141
Query: 123 WVSALEAMVRFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMD-GEK 182
WV A A+V W+ RL G H+F P L P + +PSD +EL DRLR+LF+ I LM+ GE
Sbjct: 142 WVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRLRDLFSSHILSLMENGEG 201
Query: 183 VRDWQKKRDLVKVQIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMR 242
V+ + + + Q+ +S S ++ L +FE+ EK+K + E+D ++ EEF +AM+
Sbjct: 202 VKKVRLEIEEKSRQV--VSFSSKRGL----KFEVFEKKKAIEAERDLVVNRLEEFNNAMK 261
Query: 243 YILDYV---EGKKLELSDIE--DVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRR 302
IL Y+ +G + +L D E DV VF + W RIH LI RECRRLED LP+Y+ RR
Sbjct: 262 SILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPIYAYRR 321
Query: 303 EILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVRE 362
+IL++I+ +Q+MVLIGETGSGKSTQLVQFLADSG+++S+SIVCTQPRKI+A++LA RVRE
Sbjct: 322 QILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLADRVRE 381
Query: 363 ESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERS 422
ES GCY+++ +SC P FSS ++ SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERS
Sbjct: 382 ESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERS 441
Query: 423 LNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPS 482
LNTDLL ALLK LL R+DL L+IMSATA+A QLS+YFF CGI V GRNFPV+I Y PS
Sbjct: 442 LNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPS 501
Query: 483 LDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLA 542
E +S +ASYV DVV+MA EIH EK GTILAFLTSQ EVEWACE F P + L
Sbjct: 502 DTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPSAIALP 561
Query: 543 FHGKQSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMN 602
HGK SF+EQFRVFQ+HPG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR GM+
Sbjct: 562 LHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMS 621
Query: 603 ILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRIL 662
ILKVCR SQSSA QRAGRAGRTEPGRCYRLYS++DF+ M+ N EPEIR+VHLGVA+LR+L
Sbjct: 622 ILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRML 681
Query: 663 ALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLG 722
ALGV N+ +F+FVDAP EA+ MA++NLVQLGA+ + V+ELT EG LVKLG+EP+LG
Sbjct: 682 ALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLG 741
Query: 723 KLILSCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLS 782
KLIL CF R+ +EG+VLA +M NASSIFCRVG +DK+K+D KVQFC+ +GDLFTLLS
Sbjct: 742 KLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLS 801
Query: 783 VYKQYEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKP 842
VYK++ +LPRER+N+WCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+ +
Sbjct: 802 VYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEG 861
Query: 843 TDHDRNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFG 902
T HD++LK ILASL+ENVAM+TGY++LGYEVA+TG+ VQLHPSCSLL F +KP WVVFG
Sbjct: 862 TKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFG 921
Query: 903 EILSISNEYLVCVTAIDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKS 962
E+LSI ++YLVCVTA D +AL + PPP FD+S M++ RL ++ + G T+LKR CGKS
Sbjct: 922 ELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKRFCGKS 981
Query: 963 NSNLSSLTSHVRKVFSDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWN 1022
N +L S+ S R + SD+ IGI+V+++QNEI L++ +M+ V VND LE E+K++ N
Sbjct: 982 NRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEKKWMHN 1041
Query: 1023 ECMEKCLYHGNGGSPSVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKS 1082
EC+EK LYHG G P +AL GSGA+I+HLE+++R+LTVDV D +DD+EL LEK
Sbjct: 1042 ECLEKYLYHGRGQVP-IALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLTFLEKK 1101
Query: 1083 VSGTICTIQKVPCSGQDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITA 1142
+ G+IC+I K + QD D+KE+ RITFLTP++A KA ++ +F GS++K+ P T
Sbjct: 1102 IDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFPSLSTG 1161
Query: 1143 GCDNKLFSFPPVKAKVLWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIK 1202
G K+ F V AK+ WPRR S G +KC S D+ ++ D S+L IG ++ + +
Sbjct: 1162 GGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHIQRDQQ 1221
Query: 1203 YNDCVTLSGIDKELSEADIFNILRSATDREILDLFLVREN-PVNNPPVNACEEALLKEIS 1262
ND + +SG+ +LSEA++ ++L T R L+ F+ R+ V P ACEE L K I
Sbjct: 1222 SNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIF 1281
Query: 1263 AFMPKSHPHVKCCYVQVFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQ 1322
A M +P C VQVF+P+ +++MRA I FDGRLH EAAKAL+ L G+ L C PWQ
Sbjct: 1282 ARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPGCLPWQ 1341
Query: 1323 KIKCQQLFHSTLSCTIPIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANAT 1382
KIKC+QLF S++ C+ I+ +K QLN LL ++ G EC L NG+YRVK++A AT
Sbjct: 1342 KIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYAT 1401
Query: 1383 KTVAELRRPVEALLRGKIIDHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLS 1442
+ VAE+RR +E LLRG+ I+H T VLQHL SRDG +L+ +Q+E E YIL DR L+
Sbjct: 1402 RPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINLMRKIQQETETYILLDRHNLT 1461
Query: 1443 LRIFGASENVAAAERKLIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQ 1502
+RI G SE +A AE++LIQ+L HE KQLEIHLRG P+L+K VV++FGP+L G+K+
Sbjct: 1462 VRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKE 1521
Query: 1503 KFPEAGFTLNTRHHILSVHGSKDLKQEVETIIYELEKTSGGLAERPDDADA-CSICLCDI 1562
K LNTR+H++ VHGSK+++QEV+ ++ EL + L E+PD+ + C ICL ++
Sbjct: 1522 KVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIEVECPICLSEV 1581
Query: 1563 EDDRFELEACGHHFCRQCLLEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKL 1622
DD + LE C H FC+ CLLEQFE++++N +FP+ C+ C +PI+L DMR LLS EKL
Sbjct: 1582 -DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADMRALLSQEKL 1641
Query: 1623 EELFRASLGAFV-AGDSAYRFCPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEY 1682
+ELF ASL +FV + D +RFC +PDCPSVYRVA P GEPF+CGAC SE CTRCHLEY
Sbjct: 1642 DELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSEICTRCHLEY 1701
Query: 1683 HPFLSCEQYRVFKEDPDSSLDEWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWV 1739
HP ++CE+Y+ FKE+PD SL +W KGK NVK CP+C TIEK +GCNH++C+CG+HICW
Sbjct: 1702 HPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTIEKTDGCNHMKCRCGKHICWT 1761
BLAST of Carg14243 vs. ExPASy Swiss-Prot
Match:
P0CE10 (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)
HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 932/1695 (54.99%), Postives = 1228/1695 (72.45%), Query Frame = 0
Query: 59 RANFVIDLV------LDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSA 118
R NF++ L+ D + K +E + C ++ VPQ G + A F+QWV A
Sbjct: 81 RPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFRQWVDA 140
Query: 119 LEAMVRFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMD-GEKVRDW 178
A+V W+ RL G HDF P L P + +PSD DEL DRLR+LF+ + LM+ G+ V+
Sbjct: 141 RSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKV 200
Query: 179 QKKRDLVKVQIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILD 238
+ + D Q+ S S ++ L +FE+ EK+K L E+D ++ +EF +AM+ IL
Sbjct: 201 RMEIDDKSRQV--ASFSSKRGL----KFEVFEKKKALEAERDLVVNRLDEFNNAMKSILR 260
Query: 239 YVEGK-----KLELSDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILR 298
Y+ G+ ++ D EDV VF + W RIH LILRECRRLED LP+Y+ RR+IL+
Sbjct: 261 YLIGQDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRRQILK 320
Query: 299 QIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRG 358
+I+ +Q+MVLIGETGSGKSTQLVQFLADSG+++S+SIVCTQPRKI+A++L RVREES G
Sbjct: 321 KIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSG 380
Query: 359 CYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTD 418
CY+++ +SC P FSS ++ SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERSLNTD
Sbjct: 381 CYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTD 440
Query: 419 LLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEG 478
LL ALL+ LL R+DL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS E
Sbjct: 441 LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEE 500
Query: 479 SSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGK 538
+S +ASY DVV+MA EIH EK GTILAFLTSQ EVEWACE F AP + L HGK
Sbjct: 501 NSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGK 560
Query: 539 QSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKV 598
SF+EQF VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR GM+ILKV
Sbjct: 561 LSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKV 620
Query: 599 CRTSQSSANQRAGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGV 658
C+ SQSSA QRAGRAGRTEPGRCYRLYS++DF+ M+ N EPEIR+VHLGVA+LR+LALG+
Sbjct: 621 CQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGI 680
Query: 659 KNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLIL 718
N+ F+FVDAP EA+ MAI+NLVQLGA+ + V ELT EG LVKLG+EP+LGKLIL
Sbjct: 681 DNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLIL 740
Query: 719 SCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQ 778
CF R+ +EG+VLA +M NASSIFCRVG +DK+K+D KVQFC+ +GDLFTLLSVYK+
Sbjct: 741 GCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKE 800
Query: 779 YEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHD 838
+ +LPR+R+N+WCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+ + T HD
Sbjct: 801 WASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 860
Query: 839 RNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILS 898
+ LK ILASL+ENVAM+TGYD+LGYEVA+T + VQLHPSCSLL F +KP WVVFGE+LS
Sbjct: 861 KYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLS 920
Query: 899 ISNEYLVCVTAIDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL 958
I ++YLVCVTA D +AL + PPP FD S M++ RL V+ + G T+LKR CGKSN +L
Sbjct: 921 IVDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSL 980
Query: 959 SSLTSHVRKVFSDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECME 1018
S+ S R + SD+ IGI+V+++QNEI L++ +M+ V VND LE E+K++ NEC+E
Sbjct: 981 LSIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLE 1040
Query: 1019 KCLYHGNGGSPSVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGT 1078
K L+HG G P +AL GSGA+I+HLE+++R+LTVDV D +DD+EL LEK + G
Sbjct: 1041 KYLFHGRGQIP-IALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGC 1100
Query: 1079 ICTIQKVPCSGQDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDN 1138
IC+I K + QD D+KE+ RITFLTP++A KA ++ F GS++K+ P T G
Sbjct: 1101 ICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIF 1160
Query: 1139 KLFSFPPVKAKVLWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDC 1198
K+ F V AK+ WPR+ S G +KC S D+ ++ D ++L IG ++ + ND
Sbjct: 1161 KMPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDS 1220
Query: 1199 VTLSGIDKELSEADIFNILRSATDREILDLFLVREN-PVNNPPVNACEEALLKEISAFMP 1258
+ +SG+ +LSEA++ ++L T R L+ F+ R+ V P ACEE L K I A M
Sbjct: 1221 ILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMS 1280
Query: 1259 KSHPHVKCCYVQVFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKC 1318
+P C VQVF+P+ +++MRA I FDGRLHLEAAKAL+ L G+ L C PWQKIKC
Sbjct: 1281 AKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKC 1340
Query: 1319 QQLFHSTLSCTIPIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVA 1378
+QLF S++ C+ I+ +K QLN LL ++ G EC L NG+YRVK++A AT+ VA
Sbjct: 1341 EQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVA 1400
Query: 1379 ELRRPVEALLRGKIIDHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIF 1438
E+RR +E LLRGK I+H TP V+QHL SRDG +L+ +Q+E E YIL DR L++RI
Sbjct: 1401 EMRRELEELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLTVRIC 1460
Query: 1439 GASENVAAAERKLIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPE 1498
G SE +A AE++L+QSL HE KQLEIHLRG P+L+K VV++FGP+L G+K+K
Sbjct: 1461 GTSEKIAKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHG 1520
Query: 1499 AGFTLNTRHHILSVHGSKDLKQEVETIIYELEKTSGGLAERPDDAD-ACSICLCDIEDDR 1558
LNTR+H++ VHGSK+++QEV+ ++ EL + L E+PD+ + C ICL ++ DD
Sbjct: 1521 VDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEV-DDG 1580
Query: 1559 FELEACGHHFCRQCLLEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELF 1618
+ LE C H FC+ CLLEQFE++++N +FP+ C+ C +PI++ DMR LLS EKL+EL
Sbjct: 1581 YSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELI 1640
Query: 1619 RASLGAFV-AGDSAYRFCPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFL 1678
ASL AFV + D RFC +PDCPS+YRVA P GEPF+CGAC SETCTRCHLEYHP +
Sbjct: 1641 SASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLEYHPLI 1700
Query: 1679 SCEQYRVFKEDPDSSLDEWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDY 1738
+CE+Y+ FKE+PD SL +W KGK+ VK CP+C TIEK +GCNH++C+CG+HICW CLD
Sbjct: 1701 TCERYKKFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICWTCLDV 1760
BLAST of Carg14243 vs. ExPASy Swiss-Prot
Match:
Q38953 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)
HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-113
Identity = 245/693 (35.35%), Postives = 395/693 (57.00%), Query Frame = 0
Query: 227 RYILDYVEGKKLELSDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILR 286
R++ + G L D+ + F +T ++ + L ++E R +SLP+Y ++E+++
Sbjct: 470 RHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQR---ESLPIYKLKKELIQ 529
Query: 287 QIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRG 346
++ QV+V+IGETGSGK+TQ+ Q+LA++G ++ I CTQPR+++A+S+A RV EE G
Sbjct: 530 AVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEF-G 589
Query: 347 CYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTD 406
C + + F + I YMTD LL+ + D+ LS S I++DEAHER+++TD
Sbjct: 590 CRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTD 649
Query: 407 LLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEG 466
+LF LLK L+ R+DL LI+ SAT +A++ S YFF C IF +PGR FPV+I Y +
Sbjct: 650 VLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE-- 709
Query: 467 SSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFH---------APG 526
Y+ + +IH E G IL FLT Q E++ AC++ + P
Sbjct: 710 -------TDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPE 769
Query: 527 TVPLAFHGKQSFDEQFRVFQ-DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFE 586
+ L + + Q R+F PGKRKV+ ATN+AE SLTI G+ YV+DPG+ K + +
Sbjct: 770 LIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYN 829
Query: 587 PRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDF-ELMSPNHEPEIRKVHLG 646
P+ G+ L + SQ+SA QRAGRAGRT PG+CYRLY++S + M P PEI++++LG
Sbjct: 830 PKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLG 889
Query: 647 VAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKL 706
+ L + A+G+ ++ FDF+D P +A+ A+ L LGA+ LT GR + +
Sbjct: 890 MTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEG---LLTKLGRKMAEF 949
Query: 707 GIEPRLGKLILSCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDG 766
+EP L K++L+ + E ++ + M +IF R E + ++D ++ +F P+G
Sbjct: 950 PLEPPLSKMLLASVDLGCSDE-ILTMIAMIQTGNIFYR--PREKQAQADQKRAKFFQPEG 1009
Query: 767 DLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYW 826
D TLL+VY+ ++A + WC+EN I ++++RR QD ++++L I+ Y
Sbjct: 1010 DHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQD--------VRKQLLSIMDKYK 1069
Query: 827 LWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEK 886
L + + ++K I A + A + GY + + V +HPS +L F +
Sbjct: 1070 L-DVVTAGKNFTKIRKAITAGFFFHGARKDPQE--GYRTLVENQPVYIHPSSAL--FQRQ 1128
Query: 887 PKWVVFGEILSISNEYLVCVTAIDVDALSTISP 909
P WV++ +++ + EY+ VT ID L ++P
Sbjct: 1130 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAP 1128
BLAST of Carg14243 vs. ExPASy Swiss-Prot
Match:
Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)
HSP 1 Score: 394.0 bits (1011), Expect = 8.5e-108
Identity = 234/654 (35.78%), Postives = 372/654 (56.88%), Query Frame = 0
Query: 266 RECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVC 325
R + +SLP++ R L+ + Q++V+IGETGSGK+TQ+ Q+LA++G + I C
Sbjct: 499 RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGC 558
Query: 326 TQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDK 385
TQPR+++A+S++ RV EE GC + F ++ I +MTD LL+ + D
Sbjct: 559 TQPRRVAAMSVSKRVAEEF-GCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 618
Query: 386 KLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGI 445
LS S II+DEAHER+++TD+LF LLK L R +L ++I SAT A++ SKYF +
Sbjct: 619 NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQL 678
Query: 446 FHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQME 505
F +PGR FPVDIRY + A Y+ + +IH E G IL FLT Q E
Sbjct: 679 FIIPGRTFPVDIRYTKDPE---------ADYLDASLITVMQIHLSEPPGDILLFLTGQEE 738
Query: 506 VEWACE---------NFHAPGTVPLAFHGKQSFDEQFRVFQD-HPGKRKVIFATNLAETS 565
++ AC+ + P + L + + Q ++F+ PG RKV+ ATN+AETS
Sbjct: 739 IDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETS 798
Query: 566 LTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQ 625
LTI G+ YVIDPG+ K F P+NGM+ L V SQ++A QR+GRAGRT PG+CYRLY++
Sbjct: 799 LTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTE 858
Query: 626 SDFE-LMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLG 685
S F+ M + PEI++ +LG +L + A+G+ ++ +FDF+D P + + A+ L LG
Sbjct: 859 SAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLG 918
Query: 686 AITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNASSIFCRV 745
A+ LT GR + + ++P+L K++++ + E ++ V M + ++F R
Sbjct: 919 ALDEEG---LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDE-ILTVVAMLSVQNVFYR- 978
Query: 746 GKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRCQD 805
E + +D +K +F P+GD TLL+VY+ ++ + N WC+EN + A+++RR QD
Sbjct: 979 -PKEKQALADQKKAKFFQPEGDHLTLLNVYESWK--NSKFSNPWCFENFVQARSLRRAQD 1038
Query: 806 AILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLGYEV 865
++++L I+ Y L + + ++K I + N + + GY+
Sbjct: 1039 --------VRKQLITIMDRYKL-DIISAGRNYTKIQKAICSGFFANASKKDPNE--GYKT 1098
Query: 866 AMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 909
+ G+ V +HPS +L F+ P WV++ E++ + EY+ V ID L ++P
Sbjct: 1099 LVEGQPVYIHPSSTL--FNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAP 1121
BLAST of Carg14243 vs. ExPASy Swiss-Prot
Match:
Q09530 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans OX=6239 GN=mog-5 PE=1 SV=1)
HSP 1 Score: 391.0 bits (1003), Expect = 7.2e-107
Identity = 237/647 (36.63%), Postives = 368/647 (56.88%), Query Frame = 0
Query: 273 DSLPMYSCRREILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKIS 332
+SLP+++ ++ ++ + Q++V++GETGSGK+TQ+ Q+ ++GL I CTQPR+++
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597
Query: 333 AISLAHRVREESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSC 392
A+S+A RV EE GC + F + I YMTD LL+ + D LS S
Sbjct: 598 AMSVAKRVAEE-YGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSL 657
Query: 393 IIIDEAHERSLNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRN 452
I++DEAHER+++TD+LF LLK+ R +L LII SAT ++ + S+YF IF +PGR
Sbjct: 658 IMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRT 717
Query: 453 FPVDIRYVPSLDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACEN 512
FPV+I Y + A+++T +IH E G +L FLT Q E++ +CE
Sbjct: 718 FPVEILYT----REPESDYLEAAHIT-----VMQIHLTEPPGDVLVFLTGQEEIDTSCEV 777
Query: 513 FH---------APGTVPLAFHGKQSFDEQFRVFQDHP-GKRKVIFATNLAETSLTIPGVK 572
+ P + L +G + Q R+F P GKRKV+ ATN+AETSLTI G+
Sbjct: 778 LYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIF 837
Query: 573 YVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDF-ELM 632
YV+DPG+VK + P++GM+ L V SQ++A QR+GRAGRT PG+CYRLY++ F + M
Sbjct: 838 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 897
Query: 633 SPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSN 692
P PEI++ +L +L++ A+G+ N+ DFDF+DAP +++ A+ L L A+ +
Sbjct: 898 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG- 957
Query: 693 VYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKL 752
LT GR + + +EP L KL++ + E V+ V M N +IF R + +D
Sbjct: 958 --LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEE-VLTIVAMLNVQNIFYRPKEKQD-- 1017
Query: 753 KSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRCQDAILELER 812
+D +K +F P+GD TLL+VY ++ WC+EN I ++M+R QD
Sbjct: 1018 HADQKKAKFHQPEGDHLTLLAVYNSWK--NHHFSQPWCFENFIQVRSMKRAQD------- 1077
Query: 813 CLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHV 872
++++L I+ + L D R ++K I + N A + GY G++V
Sbjct: 1078 -IRKQLLGIMDRHKLLMVSCGRDVSR-VQKAICSGFFRNAAKRDPQE--GYRTLTDGQNV 1137
Query: 873 QLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 909
+HPS + F ++P+WVV+ E++ + EY+ VTAID L +P
Sbjct: 1138 YIHPSSA--CFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAP 1153
BLAST of Carg14243 vs. ExPASy TrEMBL
Match:
A0A6J1FR66 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448026 PE=4 SV=1)
HSP 1 Score: 3526.5 bits (9143), Expect = 0.0e+00
Identity = 1723/1740 (99.02%), Postives = 1731/1740 (99.48%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 62
SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF
Sbjct: 4 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 63
Query: 63 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 122
VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL
Sbjct: 64 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 123
Query: 123 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 182
RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKV+DWQKKRDLVKVQI
Sbjct: 124 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVQDWQKKRDLVKVQI 183
Query: 183 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 242
DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL D
Sbjct: 184 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELPD 243
Query: 243 IEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 302
EDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS
Sbjct: 244 SEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 303
Query: 303 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSA 362
GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYP+FSSA
Sbjct: 304 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSA 363
Query: 363 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 422
QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLM RVDL
Sbjct: 364 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMERVDL 423
Query: 423 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 482
HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR
Sbjct: 424 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 483
Query: 483 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 542
MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK
Sbjct: 484 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 543
Query: 543 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 602
RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG
Sbjct: 544 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 603
Query: 603 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 662
RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA
Sbjct: 604 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 663
Query: 663 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 722
VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLIL CFNCRVRREGVVLAV
Sbjct: 664 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILGCFNCRVRREGVVLAV 723
Query: 723 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 782
LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN
Sbjct: 724 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 783
Query: 783 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 842
SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA
Sbjct: 784 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 843
Query: 843 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 902
MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA
Sbjct: 844 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 903
Query: 903 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCI 962
LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL SLTSHVRKVFSDDC+
Sbjct: 904 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCM 963
Query: 963 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALL 1022
GIEVNINQNE+LLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSP VALL
Sbjct: 964 GIEVNINQNEVLLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALL 1023
Query: 1023 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1082
GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD
Sbjct: 1024 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1083
Query: 1083 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPR 1142
KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKV WPR
Sbjct: 1084 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPR 1143
Query: 1143 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1202
RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF
Sbjct: 1144 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1203
Query: 1203 NILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1262
NILRSATDR+ILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ
Sbjct: 1204 NILRSATDRKILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1263
Query: 1263 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1322
PKDFYMRAAITFDGRLHLEAAKALEYLEGKSL +CFPWQKIKCQQLFHSTLSCTIPIFRV
Sbjct: 1264 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLPICFPWQKIKCQQLFHSTLSCTIPIFRV 1323
Query: 1323 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1382
IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH
Sbjct: 1324 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1383
Query: 1383 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1442
ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL
Sbjct: 1384 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1443
Query: 1443 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1502
QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS
Sbjct: 1444 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1503
Query: 1503 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQ 1562
KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL+EQ
Sbjct: 1504 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQ 1563
Query: 1563 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1622
FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP
Sbjct: 1564 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1623
Query: 1623 SPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1682
SPDCPSVYRVASP+TCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW
Sbjct: 1624 SPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1683
Query: 1683 RKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1742
RKGKENVKNCP CGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1684 RKGKENVKNCPACGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
BLAST of Carg14243 vs. ExPASy TrEMBL
Match:
A0A6J1I2G6 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468977 PE=4 SV=1)
HSP 1 Score: 3506.5 bits (9091), Expect = 0.0e+00
Identity = 1713/1740 (98.45%), Postives = 1727/1740 (99.25%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 62
SSSSSSS+TVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF
Sbjct: 6 SSSSSSSTTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 65
Query: 63 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 122
VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMV FWEL
Sbjct: 66 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVTFWEL 125
Query: 123 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 182
RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI
Sbjct: 126 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 185
Query: 183 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 242
DRISHSLRKPLGIATQFEL+EKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD
Sbjct: 186 DRISHSLRKPLGIATQFELKEKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 245
Query: 243 IEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 302
EDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQI+SQQVMVLIGETGS
Sbjct: 246 SEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIHSQQVMVLIGETGS 305
Query: 303 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSA 362
GKSTQLVQFLADSGLSSS+SIVCTQPRKISA SLAHRVREESRGCYDDDCISCYP+FSSA
Sbjct: 306 GKSTQLVQFLADSGLSSSESIVCTQPRKISATSLAHRVREESRGCYDDDCISCYPSFSSA 365
Query: 363 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 422
QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL
Sbjct: 366 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 425
Query: 423 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 482
HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPC VASYVTDVVR
Sbjct: 426 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCTVASYVTDVVR 485
Query: 483 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 542
MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK
Sbjct: 486 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 545
Query: 543 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 602
RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG
Sbjct: 546 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 605
Query: 603 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 662
RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA
Sbjct: 606 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 665
Query: 663 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 722
VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV
Sbjct: 666 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 725
Query: 723 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 782
LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN
Sbjct: 726 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 785
Query: 783 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 842
SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA
Sbjct: 786 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 845
Query: 843 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 902
MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA
Sbjct: 846 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 905
Query: 903 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCI 962
LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL SLTSHVRKVFSDDCI
Sbjct: 906 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCI 965
Query: 963 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALL 1022
GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGN GSP VALL
Sbjct: 966 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNDGSPPVALL 1025
Query: 1023 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1082
GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD
Sbjct: 1026 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDD 1085
Query: 1083 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPR 1142
KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKV WPR
Sbjct: 1086 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPR 1145
Query: 1143 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1202
RLSKGFAVVKCNSYDVSFLVNDFSNLL GERFLRCEPSIKYNDCVTLSGIDKELSEADIF
Sbjct: 1146 RLSKGFAVVKCNSYDVSFLVNDFSNLLNGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1205
Query: 1203 NILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1262
N+LRSATDR+ILDLFLVRENPV+NPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ
Sbjct: 1206 NVLRSATDRKILDLFLVRENPVSNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1265
Query: 1263 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1322
PKDFYMRAAITFDGRLHLEAAKALEYLEGK+L VCFPWQKIKCQQLFHSTLSCTIPIFRV
Sbjct: 1266 PKDFYMRAAITFDGRLHLEAAKALEYLEGKALPVCFPWQKIKCQQLFHSTLSCTIPIFRV 1325
Query: 1323 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1382
IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH
Sbjct: 1326 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1385
Query: 1383 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1442
AS+TPTVLQHL SRDGFDLINLLQRENEVYIL DRQRLSLRIFGASENVAAAERKLIQSL
Sbjct: 1386 ASLTPTVLQHLNSRDGFDLINLLQRENEVYILVDRQRLSLRIFGASENVAAAERKLIQSL 1445
Query: 1443 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1502
QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS
Sbjct: 1446 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1505
Query: 1503 KDLKQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQ 1562
KDLK +VETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL+EQ
Sbjct: 1506 KDLKHDVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQ 1565
Query: 1563 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1622
FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP
Sbjct: 1566 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVAGDSAYRFCP 1625
Query: 1623 SPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1682
SPDCPSVYRVASP+TCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW
Sbjct: 1626 SPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEW 1685
Query: 1683 RKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1742
RKG+ENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV
Sbjct: 1686 RKGRENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1745
BLAST of Carg14243 vs. ExPASy TrEMBL
Match:
A0A5A7TQC6 (ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00960 PE=4 SV=1)
HSP 1 Score: 3028.0 bits (7849), Expect = 0.0e+00
Identity = 1479/1738 (85.10%), Postives = 1582/1738 (91.02%), Query Frame = 0
Query: 7 SSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVIDL 66
SSSST RPPDSS CNRPS L +LPRSPN + P KF S Q+ PNRANF IDL
Sbjct: 3 SSSSTASRPPDSSFRCNRPSNLHFLPRSPNASD---LPSKF---SAQQNCPNRANFAIDL 62
Query: 67 VLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLDG 126
VL+HR ++KCSVE+L+AKC SKPDNFI+PQ G V AFLFFKQWVSALE+MV WELRL+G
Sbjct: 63 VLEHRTLSKCSVELLIAKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNG 122
Query: 127 LHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDRIS 186
HDFTPILKPRINLPSD DELH RLRNLFAERI+RLMDG+KVR WQ K DLV VQIDRIS
Sbjct: 123 FHDFTPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRIS 182
Query: 187 HSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIEDV 246
LR+PL FEL EK+KGL+VEK+SIMR EEF SAM +ILD+VEGKK+E SD D+
Sbjct: 183 DILRRPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDM 242
Query: 247 GVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKST 306
G+F FD TI+WNRIHSLILRECRRLED LPMYSCR+EILRQI QQVMVLIGETGSGKST
Sbjct: 243 GIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKST 302
Query: 307 QLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGC-YDDDCISCYPAFSSAQQF 366
QLVQFLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YDDD ISCYP+FSSAQQF
Sbjct: 303 QLVQFLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQF 362
Query: 367 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI 426
KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLMVR+DLHLI
Sbjct: 363 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLI 422
Query: 427 IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS 486
IMSATANADQLSKYFF CGIF VPGR+FPVDI+YVPS +EG+SG CIV SYVTDVV+MAS
Sbjct: 423 IMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMAS 482
Query: 487 EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV 546
EIHW+EKGG ILAFLTSQMEVEWACENFHAPGTVPLAFHGK SFDEQFRVFQDHPGKRKV
Sbjct: 483 EIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKV 542
Query: 547 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE 606
IFATNLAETSLTIPGVKYVIDPGWVKDSKFEP +GMNILKVCRTSQSSANQRAGRAGRTE
Sbjct: 543 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTE 602
Query: 607 PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 666
PGRCYRLY++S+FELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM
Sbjct: 603 PGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 662
Query: 667 AIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT 726
AIRNL+QLGAITLN+ VYELTNEG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMT
Sbjct: 663 AIRNLIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMT 722
Query: 727 NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN 786
NASSIFCRVG+VEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALP+ERKN+WCWENSIN
Sbjct: 723 NASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSIN 782
Query: 787 AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT 846
AKTMRRCQDAILELERCLKQEL+IIIPSYWLWS LKP+DHDRN+KKCIL SL+ENVAMFT
Sbjct: 783 AKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFT 842
Query: 847 GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST 906
GYDRLGYEVAMTG+HVQLHPSCSLLIFSE+PKWVVF EILSI NEYL+CVTA DVDAL T
Sbjct: 843 GYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLT 902
Query: 907 ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGIE 966
+SPPPLFDIS MEKHRLE R LSGFGKT+LKRVCGKSNSNL SLTSHVRKVFSD+CIGIE
Sbjct: 903 LSPPPLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIE 962
Query: 967 VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALLGSG 1026
VNINQNE++LFSR+ENMD V HFVND+LEYERKYL NECMEKCLYHGNGGS VALLG+G
Sbjct: 963 VNINQNEVMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAG 1022
Query: 1027 AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKER 1086
AKIRHLELEKRYLTV FR NVDSIDDKE F SLE VSGTIC+IQKVP SG D DD+ R
Sbjct: 1023 AKIRHLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGR 1082
Query: 1087 GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRLS 1146
G+RITFLTPDAAEKA K+D FCGSL+KIIP ++TAGCDNK+F+FPPVKAKV WPRRLS
Sbjct: 1083 GYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLS 1142
Query: 1147 KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL 1206
KGFAVVKCN DV F++NDFS+LLIG RFLRCEPSIKYNDCVT+SGIDKELSEADI N+L
Sbjct: 1143 KGFAVVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVL 1202
Query: 1207 RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD 1266
R+ATDR+ILDLFLVREN V+NPPVN+CEE+LLKEIS FMPKS+PHVKCC VQVF PQPKD
Sbjct: 1203 RTATDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKD 1262
Query: 1267 FYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKC 1326
FYM+AAITFDGRLHLEAAKALE+LEGK+L VC PWQKIKCQQLFHSTLSCTIPI+RVIK
Sbjct: 1263 FYMKAAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKH 1322
Query: 1327 QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV 1386
QLNSLLES ++IDG ECTLSQN+NGSYRVKLSANATKTVAELRRPVE LLRGKIID AS+
Sbjct: 1323 QLNSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASL 1382
Query: 1387 TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL 1446
TPTV+QHLTSRDGFDLINLLQREN VYILFDRQRL LRIFGASEN+AAAE+KLIQSL+ +
Sbjct: 1383 TPTVVQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLI 1442
Query: 1447 HERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL 1506
HE KQLEIHLRGKS P NLLK VVEKFGPDLNGLKQKFP AGFTLNTR HIL V GSKDL
Sbjct: 1443 HESKQLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDL 1502
Query: 1507 KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFES 1566
KQEVETI++EL SGG ERPDDAD C ICLCDIEDDRFELEACG HFCRQCL+EQFES
Sbjct: 1503 KQEVETIVFELAAMSGGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFES 1562
Query: 1567 AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFCPSP 1626
AIKN G FPVCCAKQ C +PI+L DMR LLS+EKLEELFRASLGAF+A D AYRFCPSP
Sbjct: 1563 AIKNQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSP 1622
Query: 1627 DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK 1686
DCPSVYRVA PN GEPFMC AC+SETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK
Sbjct: 1623 DCPSVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRK 1682
Query: 1687 GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
GKENVKNCPVCGYTIEK EGCNH+EC+CGRHICWVCL+YFGSSDECY HL S+HM V
Sbjct: 1683 GKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Carg14243 vs. ExPASy TrEMBL
Match:
A0A5D3BD53 (ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00060 PE=4 SV=1)
HSP 1 Score: 3026.5 bits (7845), Expect = 0.0e+00
Identity = 1478/1738 (85.04%), Postives = 1582/1738 (91.02%), Query Frame = 0
Query: 7 SSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVIDL 66
SSSST RPPDSS CNRPS L +LPRSPN + P KF S Q+ PNRANF IDL
Sbjct: 3 SSSSTASRPPDSSFRCNRPSNLHFLPRSPNASD---LPSKF---SAQQNCPNRANFAIDL 62
Query: 67 VLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLDG 126
VL+HR ++KCSVE+L++KC SKPDNFI+PQ G V AFLFFKQWVSALE+MV WELRL+G
Sbjct: 63 VLEHRTLSKCSVELLISKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNG 122
Query: 127 LHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDRIS 186
HDFTPILKPRINLPSD DELH RLRNLFAERI+RLMDG+KVR WQ K DLV VQIDRIS
Sbjct: 123 FHDFTPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRIS 182
Query: 187 HSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIEDV 246
LR+PL FEL EK+KGL+VEK+SIMR EEF SAM +ILD+VEGKK+E SD D+
Sbjct: 183 DILRRPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDM 242
Query: 247 GVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKST 306
G+F FD TI+WNRIHSLILRECRRLED LPMYSCR+EILRQI QQVMVLIGETGSGKST
Sbjct: 243 GIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKST 302
Query: 307 QLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGC-YDDDCISCYPAFSSAQQF 366
QLVQFLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YDDD ISCYP+FSSAQQF
Sbjct: 303 QLVQFLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQF 362
Query: 367 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI 426
KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLMVR+DLHLI
Sbjct: 363 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLI 422
Query: 427 IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS 486
IMSATANADQLSKYFF CGIF VPGR+FPVDI+YVPS +EG+SG CIV SYVTDVV+MAS
Sbjct: 423 IMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMAS 482
Query: 487 EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV 546
EIHW+EKGG ILAFLTSQMEVEWACENFHAPGTVPLAFHGK SFDEQFRVFQDHPGKRKV
Sbjct: 483 EIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKV 542
Query: 547 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE 606
IFATNLAETSLTIPGVKYVIDPGWVKDSKFEP +GMNILKVCRTSQSSANQRAGRAGRTE
Sbjct: 543 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTE 602
Query: 607 PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 666
PGRCYRLY++S+FELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM
Sbjct: 603 PGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 662
Query: 667 AIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT 726
AIRNL+QLGAITLN+ VYELTNEG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMT
Sbjct: 663 AIRNLIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMT 722
Query: 727 NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN 786
NASSIFCRVG+VEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALP+ERKN+WCWENSIN
Sbjct: 723 NASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSIN 782
Query: 787 AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT 846
AKTMRRCQDAILELERCLKQEL+IIIPSYWLWS LKP+DHDRN+KKCIL SL+ENVAMFT
Sbjct: 783 AKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFT 842
Query: 847 GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST 906
GYDRLGYEVAMTG+HVQLHPSCSLLIFSE+PKWVVF EILSI NEYL+CVTA DVDAL T
Sbjct: 843 GYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLT 902
Query: 907 ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGIE 966
+SPPPLFDIS MEKHRLE R LSGFGKT+LKRVCGKSNSNL SLTSHVRKVFSD+CIGIE
Sbjct: 903 LSPPPLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIE 962
Query: 967 VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALLGSG 1026
VNINQNE++LFSR+ENMD V HFVND+LEYERKYL NECMEKCLYHGNGGS VALLG+G
Sbjct: 963 VNINQNELMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAG 1022
Query: 1027 AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKER 1086
AKIRHLELEKRYLTV FR NVDSIDDKE F SLE VSGTIC+IQKVP SG D DD+ R
Sbjct: 1023 AKIRHLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGR 1082
Query: 1087 GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRLS 1146
G+RITFLTPDAAEKA K+D FCGSL+KIIP ++TAGCDNK+F+FPPVKAKV WPRRLS
Sbjct: 1083 GYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLS 1142
Query: 1147 KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL 1206
KGFAVVKCN DV F++NDFS+LLIG RFLRCEPSIKYNDCVT+SGIDKELSEADI N+L
Sbjct: 1143 KGFAVVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVL 1202
Query: 1207 RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD 1266
R+ATDR+ILDLFLVREN V+NPPVN+CEE+LLKEIS FMPKS+PHVKCC VQVF PQPKD
Sbjct: 1203 RTATDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKD 1262
Query: 1267 FYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKC 1326
FYM+AAITFDGRLHLEAAKALE+LEGK+L VC PWQKIKCQQLFHSTLSCTIPI+RVIK
Sbjct: 1263 FYMKAAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKH 1322
Query: 1327 QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV 1386
QLNSLLES ++IDG ECTLSQN+NGSYRVKLSANATKTVAELRRPVE LLRGKIID AS+
Sbjct: 1323 QLNSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASL 1382
Query: 1387 TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL 1446
TPTV+QHLTSRDGFDLINLLQREN VYILFDRQRL LRIFGASEN+AAAE+KLIQSL+ +
Sbjct: 1383 TPTVVQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLI 1442
Query: 1447 HERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL 1506
HE KQLEIHLRGKS P NLLK VVEKFGPDLNGLKQKFP AGFTLNTR HIL V GSKDL
Sbjct: 1443 HESKQLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDL 1502
Query: 1507 KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFES 1566
KQEVETI++EL SGG ERPDDAD C ICLCDIEDDRFELEACG HFCRQCL+EQFES
Sbjct: 1503 KQEVETIVFELAAMSGGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFES 1562
Query: 1567 AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFCPSP 1626
AIKN G FPVCCAKQ C +PI+L DMR LLS+EKLEELFRASLGAF+A D AYRFCPSP
Sbjct: 1563 AIKNQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSP 1622
Query: 1627 DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK 1686
DCPSVYRVA PN GEPFMC AC+SETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK
Sbjct: 1623 DCPSVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRK 1682
Query: 1687 GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
GKENVKNCPVCGYTIEK EGCNH+EC+CGRHICWVCL+YFGSSDECY HL S+HM V
Sbjct: 1683 GKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Carg14243 vs. ExPASy TrEMBL
Match:
A0A1S3C1B4 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495752 PE=4 SV=1)
HSP 1 Score: 3026.5 bits (7845), Expect = 0.0e+00
Identity = 1478/1738 (85.04%), Postives = 1582/1738 (91.02%), Query Frame = 0
Query: 7 SSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVIDL 66
SSSST RPPDSS CNRPS L +LPRSPN + P KF S Q+ PNRANF IDL
Sbjct: 3 SSSSTASRPPDSSFRCNRPSNLHFLPRSPNASD---LPSKF---SAQQNCPNRANFAIDL 62
Query: 67 VLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLDG 126
VL+HR ++KCSVE+L++KC SKPDNFI+PQ G V AFLFFKQWVSALE+MV WELRL+G
Sbjct: 63 VLEHRTLSKCSVELLISKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNG 122
Query: 127 LHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQIDRIS 186
HDFTPILKPRINLPSD DELH RLRNLFAERI+RLMDG+KVR WQ K DLV VQIDRIS
Sbjct: 123 FHDFTPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRIS 182
Query: 187 HSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDIEDV 246
LR+PL FEL EK+KGL+VEK+SIMR EEF SAM +ILD+VEGKK+E SD D+
Sbjct: 183 DILRRPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDM 242
Query: 247 GVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKST 306
G+F FD TI+WNRIHSLILRECRRLED LPMYSCR+EILRQI QQVMVLIGETGSGKST
Sbjct: 243 GIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKST 302
Query: 307 QLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGC-YDDDCISCYPAFSSAQQF 366
QLVQFLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YDDD ISCYP+FSSAQQF
Sbjct: 303 QLVQFLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQF 362
Query: 367 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLI 426
KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLMVR+DLHLI
Sbjct: 363 KSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLI 422
Query: 427 IMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMAS 486
IMSATANADQLSKYFF CGIF VPGR+FPVDI+YVPS +EG+SG CIV SYVTDVV+MAS
Sbjct: 423 IMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMAS 482
Query: 487 EIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKV 546
EIHW+EKGG ILAFLTSQMEVEWACENFHAPGTVPLAFHGK SFDEQFRVFQDHPGKRKV
Sbjct: 483 EIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKV 542
Query: 547 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTE 606
IFATNLAETSLTIPGVKYVIDPGWVKDSKFEP +GMNILKVCRTSQSSANQRAGRAGRTE
Sbjct: 543 IFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTE 602
Query: 607 PGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 666
PGRCYRLY++S+FELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM
Sbjct: 603 PGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDM 662
Query: 667 AIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMT 726
AIRNL+QLGAITLN+ VYELTNEG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMT
Sbjct: 663 AIRNLIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMT 722
Query: 727 NASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSIN 786
NASSIFCRVG+VEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALP+ERKN+WCWENSIN
Sbjct: 723 NASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSIN 782
Query: 787 AKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFT 846
AKTMRRCQDAILELERCLKQEL+IIIPSYWLWS LKP+DHDRN+KKCIL SL+ENVAMFT
Sbjct: 783 AKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFT 842
Query: 847 GYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALST 906
GYDRLGYEVAMTG+HVQLHPSCSLLIFSE+PKWVVF EILSI NEYL+CVTA DVDAL T
Sbjct: 843 GYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLT 902
Query: 907 ISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCIGIE 966
+SPPPLFDIS MEKHRLE R LSGFGKT+LKRVCGKSNSNL SLTSHVRKVFSD+CIGIE
Sbjct: 903 LSPPPLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIE 962
Query: 967 VNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVALLGSG 1026
VNINQNE++LFSR+ENMD V HFVND+LEYERKYL NECMEKCLYHGNGGS VALLG+G
Sbjct: 963 VNINQNELMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAG 1022
Query: 1027 AKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKER 1086
AKIRHLELEKRYLTV FR NVDSIDDKE F SLE VSGTIC+IQKVP SG D DD+ R
Sbjct: 1023 AKIRHLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGR 1082
Query: 1087 GHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPRRLS 1146
G+RITFLTPDAAEKA K+D FCGSL+KIIP ++TAGCDNK+F+FPPVKAKV WPRRLS
Sbjct: 1083 GYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLS 1142
Query: 1147 KGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNIL 1206
KGFAVVKCN DV F++NDFS+LLIG RFLRCEPSIKYNDCVT+SGIDKELSEADI N+L
Sbjct: 1143 KGFAVVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVL 1202
Query: 1207 RSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKD 1266
R+ATDR+ILDLFLVREN V+NPPVN+CEE+LLKEIS FMPKS+PHVKCC VQVF PQPKD
Sbjct: 1203 RTATDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKD 1262
Query: 1267 FYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKC 1326
FYM+AAITFDGRLHLEAAKALE+LEGK+L VC PWQKIKCQQLFHSTLSCTIPI+RVIK
Sbjct: 1263 FYMKAAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKH 1322
Query: 1327 QLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASV 1386
QLNSLLES ++IDG ECTLSQN+NGSYRVKLSANATKTVAELRRPVE LLRGKIID AS+
Sbjct: 1323 QLNSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASL 1382
Query: 1387 TPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTL 1446
TPTV+QHLTSRDGFDLINLLQREN VYILFDRQRL LRIFGASEN+AAAE+KLIQSL+ +
Sbjct: 1383 TPTVVQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLI 1442
Query: 1447 HERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDL 1506
HE KQLEIHLRGKS P NLLK VVEKFGPDLNGLKQKFP AGFTLNTR HIL V GSKDL
Sbjct: 1443 HESKQLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDL 1502
Query: 1507 KQEVETIIYELEKTSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLEQFES 1566
KQEVETI++EL SGG ERPDDAD C ICLCDIEDDRFELEACG HFCRQCL+EQFES
Sbjct: 1503 KQEVETIVFELAAMSGGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFES 1562
Query: 1567 AIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFCPSP 1626
AIKN G FPVCCAKQ C +PI+L DMR LLS+EKLEELFRASLGAF+A D AYRFCPSP
Sbjct: 1563 AIKNQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSP 1622
Query: 1627 DCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRK 1686
DCPSVYRVA PN GEPFMC AC+SETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK
Sbjct: 1623 DCPSVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRK 1682
Query: 1687 GKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
GKENVKNCPVCGYTIEK EGCNH+EC+CGRHICWVCL+YFGSSDECY HL S+HM V
Sbjct: 1683 GKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Carg14243 vs. TAIR 10
Match:
AT5G10370.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related )
HSP 1 Score: 1901.3 bits (4924), Expect = 0.0e+00
Identity = 957/1759 (54.41%), Postives = 1259/1759 (71.57%), Query Frame = 0
Query: 3 SSSSSSSSTVFRPPDSSLTCN-RPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA- 62
S SSS++ R SS N RP++ Q + PN P + + SG RA
Sbjct: 22 SHSSSTNRYNSRSAQSSPPLNHRPTWNQQHSQYPNSNFPPNYRRDRNPSSGYSPPVTRAR 81
Query: 63 -NFVIDLVLDHRGVA-----------KCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQ 122
NF++ L+ H A K +E L C ++ VPQ G + F+Q
Sbjct: 82 PNFIVQLL--HPAAANSDTKLCFSTKKQEIESLALLCEIPEESIHVPQFGCIAGSFSFRQ 141
Query: 123 WVSALEAMVRFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMD-GEK 182
WV A A+V W+ RL G H+F P L P + +PSD +EL DRLR+LF+ I LM+ GE
Sbjct: 142 WVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRLRDLFSSHILSLMENGEG 201
Query: 183 VRDWQKKRDLVKVQIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMR 242
V+ + + + Q+ +S S ++ L +FE+ EK+K + E+D ++ EEF +AM+
Sbjct: 202 VKKVRLEIEEKSRQV--VSFSSKRGL----KFEVFEKKKAIEAERDLVVNRLEEFNNAMK 261
Query: 243 YILDYV---EGKKLELSDIE--DVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRR 302
IL Y+ +G + +L D E DV VF + W RIH LI RECRRLED LP+Y+ RR
Sbjct: 262 SILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPIYAYRR 321
Query: 303 EILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVRE 362
+IL++I+ +Q+MVLIGETGSGKSTQLVQFLADSG+++S+SIVCTQPRKI+A++LA RVRE
Sbjct: 322 QILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLADRVRE 381
Query: 363 ESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERS 422
ES GCY+++ +SC P FSS ++ SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERS
Sbjct: 382 ESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERS 441
Query: 423 LNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPS 482
LNTDLL ALLK LL R+DL L+IMSATA+A QLS+YFF CGI V GRNFPV+I Y PS
Sbjct: 442 LNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPS 501
Query: 483 LDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLA 542
E +S +ASYV DVV+MA EIH EK GTILAFLTSQ EVEWACE F P + L
Sbjct: 502 DTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPSAIALP 561
Query: 543 FHGKQSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMN 602
HGK SF+EQFRVFQ+HPG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR GM+
Sbjct: 562 LHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMS 621
Query: 603 ILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRIL 662
ILKVCR SQSSA QRAGRAGRTEPGRCYRLYS++DF+ M+ N EPEIR+VHLGVA+LR+L
Sbjct: 622 ILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRML 681
Query: 663 ALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLG 722
ALGV N+ +F+FVDAP EA+ MA++NLVQLGA+ + V+ELT EG LVKLG+EP+LG
Sbjct: 682 ALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLG 741
Query: 723 KLILSCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLS 782
KLIL CF R+ +EG+VLA +M NASSIFCRVG +DK+K+D KVQFC+ +GDLFTLLS
Sbjct: 742 KLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLS 801
Query: 783 VYKQYEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKP 842
VYK++ +LPRER+N+WCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+ +
Sbjct: 802 VYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEG 861
Query: 843 TDHDRNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFG 902
T HD++LK ILASL+ENVAM+TGY++LGYEVA+TG+ VQLHPSCSLL F +KP WVVFG
Sbjct: 862 TKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFG 921
Query: 903 EILSISNEYLVCVTAIDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKS 962
E+LSI ++YLVCVTA D +AL + PPP FD+S M++ RL ++ + G T+LKR CGKS
Sbjct: 922 ELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKRFCGKS 981
Query: 963 NSNLSSLTSHVRKVFSDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWN 1022
N +L S+ S R + SD+ IGI+V+++QNEI L++ +M+ V VND LE E+K++ N
Sbjct: 982 NRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEKKWMHN 1041
Query: 1023 ECMEKCLYHGNGGSPSVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKS 1082
EC+EK LYHG G P +AL GSGA+I+HLE+++R+LTVDV D +DD+EL LEK
Sbjct: 1042 ECLEKYLYHGRGQVP-IALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLTFLEKK 1101
Query: 1083 VSGTICTIQKVPCSGQDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITA 1142
+ G+IC+I K + QD D+KE+ RITFLTP++A KA ++ +F GS++K+ P T
Sbjct: 1102 IDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFPSLSTG 1161
Query: 1143 GCDNKLFSFPPVKAKVLWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIK 1202
G K+ F V AK+ WPRR S G +KC S D+ ++ D S+L IG ++ + +
Sbjct: 1162 GGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHIQRDQQ 1221
Query: 1203 YNDCVTLSGIDKELSEADIFNILRSATDREILDLFLVREN-PVNNPPVNACEEALLKEIS 1262
ND + +SG+ +LSEA++ ++L T R L+ F+ R+ V P ACEE L K I
Sbjct: 1222 SNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIF 1281
Query: 1263 AFMPKSHPHVKCCYVQVFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQ 1322
A M +P C VQVF+P+ +++MRA I FDGRLH EAAKAL+ L G+ L C PWQ
Sbjct: 1282 ARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPGCLPWQ 1341
Query: 1323 KIKCQQLFHSTLSCTIPIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANAT 1382
KIKC+QLF S++ C+ I+ +K QLN LL ++ G EC L NG+YRVK++A AT
Sbjct: 1342 KIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYAT 1401
Query: 1383 KTVAELRRPVEALLRGKIIDHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLS 1442
+ VAE+RR +E LLRG+ I+H T VLQHL SRDG +L+ +Q+E E YIL DR L+
Sbjct: 1402 RPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINLMRKIQQETETYILLDRHNLT 1461
Query: 1443 LRIFGASENVAAAERKLIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQ 1502
+RI G SE +A AE++LIQ+L HE KQLEIHLRG P+L+K VV++FGP+L G+K+
Sbjct: 1462 VRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKE 1521
Query: 1503 KFPEAGFTLNTRHHILSVHGSKDLKQEVETIIYELEKTSGGLAERPDDADA-CSICLCDI 1562
K LNTR+H++ VHGSK+++QEV+ ++ EL + L E+PD+ + C ICL ++
Sbjct: 1522 KVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIEVECPICLSEV 1581
Query: 1563 EDDRFELEACGHHFCRQCLLEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKL 1622
DD + LE C H FC+ CLLEQFE++++N +FP+ C+ C +PI+L DMR LLS EKL
Sbjct: 1582 -DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADMRALLSQEKL 1641
Query: 1623 EELFRASLGAFV-AGDSAYRFCPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEY 1682
+ELF ASL +FV + D +RFC +PDCPSVYRVA P GEPF+CGAC SE CTRCHLEY
Sbjct: 1642 DELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSEICTRCHLEY 1701
Query: 1683 HPFLSCEQYRVFKEDPDSSLDEWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWV 1739
HP ++CE+Y+ FKE+PD SL +W KGK NVK CP+C TIEK +GCNH++C+CG+HICW
Sbjct: 1702 HPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTIEKTDGCNHMKCRCGKHICWT 1761
BLAST of Carg14243 vs. TAIR 10
Match:
AT4G01020.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related )
HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 932/1695 (54.99%), Postives = 1228/1695 (72.45%), Query Frame = 0
Query: 59 RANFVIDLV------LDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSA 118
R NF++ L+ D + K +E + C ++ VPQ G + A F+QWV A
Sbjct: 81 RPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFRQWVDA 140
Query: 119 LEAMVRFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMD-GEKVRDW 178
A+V W+ RL G HDF P L P + +PSD DEL DRLR+LF+ + LM+ G+ V+
Sbjct: 141 RSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKV 200
Query: 179 QKKRDLVKVQIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILD 238
+ + D Q+ S S ++ L +FE+ EK+K L E+D ++ +EF +AM+ IL
Sbjct: 201 RMEIDDKSRQV--ASFSSKRGL----KFEVFEKKKALEAERDLVVNRLDEFNNAMKSILR 260
Query: 239 YVEGK-----KLELSDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILR 298
Y+ G+ ++ D EDV VF + W RIH LILRECRRLED LP+Y+ RR+IL+
Sbjct: 261 YLIGQDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRRQILK 320
Query: 299 QIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRG 358
+I+ +Q+MVLIGETGSGKSTQLVQFLADSG+++S+SIVCTQPRKI+A++L RVREES G
Sbjct: 321 KIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSG 380
Query: 359 CYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTD 418
CY+++ +SC P FSS ++ SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERSLNTD
Sbjct: 381 CYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTD 440
Query: 419 LLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEG 478
LL ALL+ LL R+DL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS E
Sbjct: 441 LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEE 500
Query: 479 SSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGK 538
+S +ASY DVV+MA EIH EK GTILAFLTSQ EVEWACE F AP + L HGK
Sbjct: 501 NSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGK 560
Query: 539 QSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKV 598
SF+EQF VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR GM+ILKV
Sbjct: 561 LSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKV 620
Query: 599 CRTSQSSANQRAGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGV 658
C+ SQSSA QRAGRAGRTEPGRCYRLYS++DF+ M+ N EPEIR+VHLGVA+LR+LALG+
Sbjct: 621 CQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGI 680
Query: 659 KNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLIL 718
N+ F+FVDAP EA+ MAI+NLVQLGA+ + V ELT EG LVKLG+EP+LGKLIL
Sbjct: 681 DNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLIL 740
Query: 719 SCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQ 778
CF R+ +EG+VLA +M NASSIFCRVG +DK+K+D KVQFC+ +GDLFTLLSVYK+
Sbjct: 741 GCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKE 800
Query: 779 YEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHD 838
+ +LPR+R+N+WCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+ + T HD
Sbjct: 801 WASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 860
Query: 839 RNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILS 898
+ LK ILASL+ENVAM+TGYD+LGYEVA+T + VQLHPSCSLL F +KP WVVFGE+LS
Sbjct: 861 KYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLS 920
Query: 899 ISNEYLVCVTAIDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNL 958
I ++YLVCVTA D +AL + PPP FD S M++ RL V+ + G T+LKR CGKSN +L
Sbjct: 921 IVDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSL 980
Query: 959 SSLTSHVRKVFSDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECME 1018
S+ S R + SD+ IGI+V+++QNEI L++ +M+ V VND LE E+K++ NEC+E
Sbjct: 981 LSIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLE 1040
Query: 1019 KCLYHGNGGSPSVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGT 1078
K L+HG G P +AL GSGA+I+HLE+++R+LTVDV D +DD+EL LEK + G
Sbjct: 1041 KYLFHGRGQIP-IALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGC 1100
Query: 1079 ICTIQKVPCSGQDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDN 1138
IC+I K + QD D+KE+ RITFLTP++A KA ++ F GS++K+ P T G
Sbjct: 1101 ICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIF 1160
Query: 1139 KLFSFPPVKAKVLWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDC 1198
K+ F V AK+ WPR+ S G +KC S D+ ++ D ++L IG ++ + ND
Sbjct: 1161 KMPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDS 1220
Query: 1199 VTLSGIDKELSEADIFNILRSATDREILDLFLVREN-PVNNPPVNACEEALLKEISAFMP 1258
+ +SG+ +LSEA++ ++L T R L+ F+ R+ V P ACEE L K I A M
Sbjct: 1221 ILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMS 1280
Query: 1259 KSHPHVKCCYVQVFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKC 1318
+P C VQVF+P+ +++MRA I FDGRLHLEAAKAL+ L G+ L C PWQKIKC
Sbjct: 1281 AKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKC 1340
Query: 1319 QQLFHSTLSCTIPIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVA 1378
+QLF S++ C+ I+ +K QLN LL ++ G EC L NG+YRVK++A AT+ VA
Sbjct: 1341 EQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVA 1400
Query: 1379 ELRRPVEALLRGKIIDHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIF 1438
E+RR +E LLRGK I+H TP V+QHL SRDG +L+ +Q+E E YIL DR L++RI
Sbjct: 1401 EMRRELEELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLTVRIC 1460
Query: 1439 GASENVAAAERKLIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPE 1498
G SE +A AE++L+QSL HE KQLEIHLRG P+L+K VV++FGP+L G+K+K
Sbjct: 1461 GTSEKIAKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHG 1520
Query: 1499 AGFTLNTRHHILSVHGSKDLKQEVETIIYELEKTSGGLAERPDDAD-ACSICLCDIEDDR 1558
LNTR+H++ VHGSK+++QEV+ ++ EL + L E+PD+ + C ICL ++ DD
Sbjct: 1521 VDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEV-DDG 1580
Query: 1559 FELEACGHHFCRQCLLEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELF 1618
+ LE C H FC+ CLLEQFE++++N +FP+ C+ C +PI++ DMR LLS EKL+EL
Sbjct: 1581 YSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELI 1640
Query: 1619 RASLGAFV-AGDSAYRFCPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFL 1678
ASL AFV + D RFC +PDCPS+YRVA P GEPF+CGAC SETCTRCHLEYHP +
Sbjct: 1641 SASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLEYHPLI 1700
Query: 1679 SCEQYRVFKEDPDSSLDEWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDY 1738
+CE+Y+ FKE+PD SL +W KGK+ VK CP+C TIEK +GCNH++C+CG+HICW CLD
Sbjct: 1701 TCERYKKFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICWTCLDV 1760
BLAST of Carg14243 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 412.5 bits (1059), Expect = 1.6e-114
Identity = 245/693 (35.35%), Postives = 395/693 (57.00%), Query Frame = 0
Query: 227 RYILDYVEGKKLELSDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILR 286
R++ + G L D+ + F +T ++ + L ++E R +SLP+Y ++E+++
Sbjct: 470 RHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQR---ESLPIYKLKKELIQ 529
Query: 287 QIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRG 346
++ QV+V+IGETGSGK+TQ+ Q+LA++G ++ I CTQPR+++A+S+A RV EE G
Sbjct: 530 AVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEF-G 589
Query: 347 CYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTD 406
C + + F + I YMTD LL+ + D+ LS S I++DEAHER+++TD
Sbjct: 590 CRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTD 649
Query: 407 LLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEG 466
+LF LLK L+ R+DL LI+ SAT +A++ S YFF C IF +PGR FPV+I Y +
Sbjct: 650 VLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE-- 709
Query: 467 SSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFH---------APG 526
Y+ + +IH E G IL FLT Q E++ AC++ + P
Sbjct: 710 -------TDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPE 769
Query: 527 TVPLAFHGKQSFDEQFRVFQ-DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFE 586
+ L + + Q R+F PGKRKV+ ATN+AE SLTI G+ YV+DPG+ K + +
Sbjct: 770 LIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYN 829
Query: 587 PRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDF-ELMSPNHEPEIRKVHLG 646
P+ G+ L + SQ+SA QRAGRAGRT PG+CYRLY++S + M P PEI++++LG
Sbjct: 830 PKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLG 889
Query: 647 VAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKL 706
+ L + A+G+ ++ FDF+D P +A+ A+ L LGA+ LT GR + +
Sbjct: 890 MTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEG---LLTKLGRKMAEF 949
Query: 707 GIEPRLGKLILSCFNCRVRREGVVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDG 766
+EP L K++L+ + E ++ + M +IF R E + ++D ++ +F P+G
Sbjct: 950 PLEPPLSKMLLASVDLGCSDE-ILTMIAMIQTGNIFYR--PREKQAQADQKRAKFFQPEG 1009
Query: 767 DLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYW 826
D TLL+VY+ ++A + WC+EN I ++++RR QD ++++L I+ Y
Sbjct: 1010 DHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQD--------VRKQLLSIMDKYK 1069
Query: 827 LWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEK 886
L + + ++K I A + A + GY + + V +HPS +L F +
Sbjct: 1070 L-DVVTAGKNFTKIRKAITAGFFFHGARKDPQE--GYRTLVENQPVYIHPSSAL--FQRQ 1128
Query: 887 PKWVVFGEILSISNEYLVCVTAIDVDALSTISP 909
P WV++ +++ + EY+ VT ID L ++P
Sbjct: 1130 PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAP 1128
BLAST of Carg14243 vs. TAIR 10
Match:
AT5G13010.1 (RNA helicase family protein )
HSP 1 Score: 365.2 bits (936), Expect = 3.0e-100
Identity = 245/700 (35.00%), Postives = 376/700 (53.71%), Query Frame = 0
Query: 275 LPMYSCRREILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAI 334
LP++S R E+L+ I QV+V++GETGSGK+TQL Q+L + G + + + CTQPR+++A+
Sbjct: 558 LPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAM 617
Query: 335 SLAHRVREESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCII 394
S+A RV EE D I F + I YMTD LL+ + D L ++
Sbjct: 618 SVAKRVSEEMETELGDK-IGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVV 677
Query: 395 IDEAHERSLNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFP 454
+DEAHERSLNTD+LF +LK ++ R D LI+ SAT NA + S +F IF++PGR FP
Sbjct: 678 MDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFP 737
Query: 455 VDIRYVPSLDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQMEVEWAC---- 514
V+I Y S PC YV V+ A IH G IL F+T Q E+E AC
Sbjct: 738 VNILY-------SKTPC--EDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLK 797
Query: 515 ---------ENFHAPGTVPLAFHGKQSFDEQFRVFQ-DHPGKRKVIFATNLAETSLTIPG 574
+ + L + + D Q ++FQ G RK I ATN+AETSLT+ G
Sbjct: 798 ERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDG 857
Query: 575 VKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYSQSDF-E 634
+ YVID G+ K F PR GM+ L+V S+++++QRAGRAGRT PG CYRLY++S +
Sbjct: 858 IYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLN 917
Query: 635 LMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLN 694
M P+ PEI++ +LG +L + +L + N+ DFDF+D P E + ++ L LGA+
Sbjct: 918 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL--- 977
Query: 695 SNVYELTNEGRNLVKLGIEPRLGKLIL--SCFNCRVRREGVVLAVLMTNASSIFCRVGKV 754
+NV LT+ G +V+ ++P L K++L +C + V+ V M + S+F R
Sbjct: 978 NNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDC---IDEVLTIVSMLSVPSVFFR--PK 1037
Query: 755 EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRCQDA-- 814
E +SD + +F P+ D TLL+VY+Q++ + + WC ++ + K +R+ ++
Sbjct: 1038 ERAEESDAAREKFFVPESDHLTLLNVYQQWK--EHDYRGDWCNDHYLQVKGLRKAREVRS 1097
Query: 815 -ILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLGYEV 874
+L++ + LK EL P + + ++K I ++ N A G Y
Sbjct: 1098 QLLDILKQLKIELRSCGPDWDI------------VRKAICSAYFHNSARLKGVGE--YVN 1157
Query: 875 AMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTISPPPLF-- 934
TG LHPS +L P +VV+ E++ + EY+ C T+++ L+ + P+F
Sbjct: 1158 CRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELG--PMFFS 1217
Query: 935 ----DISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSS 949
D S++E + + SG + + K + S L S
Sbjct: 1218 VKDSDTSMLEHKKKQKEEKSGMEEEMEKLRRDQVESELRS 1221
BLAST of Carg14243 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 359.4 bits (921), Expect = 1.7e-98
Identity = 227/657 (34.55%), Postives = 364/657 (55.40%), Query Frame = 0
Query: 265 LRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKSTQLVQFLADSGLSSSKSIV 324
L E + + SLP+Y+ R ++L+ + QV+V++G+TGSGK+TQ+ Q+L ++G + +
Sbjct: 394 LEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVG 453
Query: 325 CTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSAQQFKSKIIYMTDHCLLQHYMND 384
CTQPR+++A+S+A RV +E G + F K+ + YMTD LL+ + +
Sbjct: 454 CTQPRRVAAMSVAARVAQE-MGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGE 513
Query: 385 KKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLHLIIMSATANADQLSKYFFGCG 444
L+ S +I+DEAHER+L+TD+LF L+K + R DL L+I SAT +A++ S YF
Sbjct: 514 PDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAP 573
Query: 445 IFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMASEIHWKEKGGTILAFLTSQM 504
IF PGR +PV+I Y +S P A Y+ + IH +E G IL F T Q
Sbjct: 574 IFSFPGRRYPVEINY-------TSAP--EADYMDAAIVTILTIHVREPLGDILVFFTGQE 633
Query: 505 EVEWACE----NFHAPGT-----VPLAFHGKQSFDEQFRVFQDHP-GKRKVIFATNLAET 564
E+E A E GT + + + Q ++F+ P G RKV+ ATN+AET
Sbjct: 634 EIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAET 693
Query: 565 SLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYS 624
SLTI G+KYV+DPG+ K + PR GM L + S++SA QRAGRAGRT PG+CYRLY+
Sbjct: 694 SLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYT 753
Query: 625 QSDFEL-MSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQL 684
++ + N PE+++ +L +L + +LG+ ++ +FDF+D P AEA+ ++ L L
Sbjct: 754 AFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFAL 813
Query: 685 GAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNASSIFCR 744
GA+ + + ELT GR + + ++P L K+I+ + E + +A +++ SIF R
Sbjct: 814 GAL---NKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR 873
Query: 745 VGKVEDKLKSDCQKVQFCHPD-GDLFTLLSVYKQYEALPRERKNQWCWENSINAKTMRRC 804
+ ++ +D ++ F + GD LL VY ++ QWC+EN I ++M+R
Sbjct: 874 --PKDKQVHADNARMNFHTGNVGDHIALLKVYSSWK--ETNFSTQWCYENYIQVRSMKRA 933
Query: 805 QDAILELERCLKQ-ELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGYDRLG 864
+D +LE L++ E++I S+L D +++K I+A + A
Sbjct: 934 RDIRDQLEGLLERVEIDIS-------SNLNELD---SVRKSIVAGFFPHTAKL--QKNGS 993
Query: 865 YEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 909
Y + V +HP+ L P+WVV+ E++ S EY+ VT + + L ++P
Sbjct: 994 YRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAP 1019
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031310.1 | 0.0e+00 | 100.00 | ATP-dependent RNA helicase DEAH12, chloroplastic [Cucurbita argyrosperma subsp. ... | [more] |
KAG6600671.1 | 0.0e+00 | 99.88 | ATP-dependent RNA helicase DEAH12, chloroplastic, partial [Cucurbita argyrosperm... | [more] |
XP_022943236.1 | 0.0e+00 | 99.02 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita moschata] | [more] |
XP_023531305.1 | 0.0e+00 | 99.19 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pep... | [more] |
XP_022969963.1 | 0.0e+00 | 98.45 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
F4KGU4 | 0.0e+00 | 54.41 | ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
P0CE10 | 0.0e+00 | 54.99 | ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
Q38953 | 2.3e-113 | 35.35 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi... | [more] |
Q54F05 | 8.5e-108 | 35.78 | ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=... | [more] |
Q09530 | 7.2e-107 | 36.63 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabd... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FR66 | 0.0e+00 | 99.02 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita moschata OX=3... | [more] |
A0A6J1I2G6 | 0.0e+00 | 98.45 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita maxima OX=366... | [more] |
A0A5A7TQC6 | 0.0e+00 | 85.10 | ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BD53 | 0.0e+00 | 85.04 | ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S3C1B4 | 0.0e+00 | 85.04 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G10370.1 | 0.0e+00 | 54.41 | helicase domain-containing protein / IBR domain-containing protein / zinc finger... | [more] |
AT4G01020.1 | 0.0e+00 | 54.99 | helicase domain-containing protein / IBR domain-containing protein / zinc finger... | [more] |
AT3G26560.1 | 1.6e-114 | 35.35 | ATP-dependent RNA helicase, putative | [more] |
AT5G13010.1 | 3.0e-100 | 35.00 | RNA helicase family protein | [more] |
AT1G32490.1 | 1.7e-98 | 34.55 | RNA helicase family protein | [more] |