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Carg14242 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGCTGATGAAGACCCATTTGTTGTCAACACCTGA ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGCTGATGAAGACCCATTTGTTGTCAACACCTGA ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGCTGATGAAGACCCATTTGTTGTCAACACCTGA MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSVVGVGILLGYTCSNADEDPFVVNT Homology
BLAST of Carg14242 vs. NCBI nr
Match: KAG7031309.1 (hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.9 bits (969), Expect = 5.3e-101 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Carg14242 vs. NCBI nr
Match: KAG6600670.1 (hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 370.5 bits (950), Expect = 8.4e-99 Identity = 189/194 (97.42%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of Carg14242 vs. NCBI nr
Match: XP_022943244.1 (uncharacterized protein LOC111448032 [Cucurbita moschata]) HSP 1 Score: 366.3 bits (939), Expect = 1.6e-97 Identity = 185/190 (97.37%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Carg14242 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima]) HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96 Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 0
BLAST of Carg14242 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67 Identity = 145/190 (76.32%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of Carg14242 vs. ExPASy TrEMBL
Match: A0A6J1FTQ9 (uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC111448032 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 7.7e-98 Identity = 185/190 (97.37%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Carg14242 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 8.5e-97 Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 0
BLAST of Carg14242 vs. ExPASy TrEMBL
Match: A0A6J1C873 (uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008325 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55 Identity = 123/184 (66.85%), Postives = 140/184 (76.09%), Query Frame = 0
BLAST of Carg14242 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48 Identity = 111/171 (64.91%), Postives = 127/171 (74.27%), Query Frame = 0
BLAST of Carg14242 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48 Identity = 111/171 (64.91%), Postives = 127/171 (74.27%), Query Frame = 0
BLAST of Carg14242 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-12 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = 0
BLAST of Carg14242 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-12 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = 0
BLAST of Carg14242 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-12 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = 0
BLAST of Carg14242 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11 Identity = 58/200 (29.00%), Postives = 91/200 (45.50%), Query Frame = 0
BLAST of Carg14242 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). ) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11 Identity = 58/200 (29.00%), Postives = 91/200 (45.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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