Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATCGGAGTCGGCGAAAGAATGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAATCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCTCGGCGGCCACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATGAGCTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTTCCATTCCCATCCCAAAGTTTCTTTGTAG
mRNA sequence
ATGGGGAAATCGGAGTCGGCGAAAGAATGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAATCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCTCGGCGGCCACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATGAGCTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTTCCATTCCCATCCCAAAGTTTCTTTGTAG
Coding sequence (CDS)
ATGGGGAAATCGGAGTCGGCGAAAGAATGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAATCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCTCGGCGGCCACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATGAGCTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTTCCATTCCCATCCCAAAGTTTCTTTGTAG
Protein sequence
MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSEFFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAFHFHFHSHPKVSL
Homology
BLAST of Carg14205 vs. NCBI nr
Match:
KAG7031272.1 (hypothetical protein SDJN02_05312, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE
Sbjct: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF
Sbjct: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
Query: 121 HFHFHSHPKVSL 133
HFHFHSHPKVSL
Sbjct: 121 HFHFHSHPKVSL 132
BLAST of Carg14205 vs. NCBI nr
Match:
KAG6600636.1 (hypothetical protein SDJN03_05869, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 263.8 bits (673), Expect = 7.7e-67
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE
Sbjct: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGE GKKKGGFWSRLMGGRKAF
Sbjct: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEEGKKKGGFWSRLMGGRKAF 120
Query: 121 HFHFHSHPKVS 132
HFHFHSHPKVS
Sbjct: 121 HFHFHSHPKVS 131
BLAST of Carg14205 vs. NCBI nr
Match:
XP_023544931.1 (uncharacterized protein LOC111804380 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 123/130 (94.62%), Postives = 126/130 (96.92%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAK+CKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE
Sbjct: 1 MGKSESAKDCKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
FFFSGDSPRR RHHHKRNASEMVMRSRAADLFGD++KMGGEGGKKKGGFWSRLMGGRKA
Sbjct: 61 FFFSGDSPRRTRHHHKRNASEMVMRSRAADLFGDKVKMGGEGGKKKGGFWSRLMGGRKA- 120
Query: 121 HFHFHSHPKV 131
FHFHS PKV
Sbjct: 121 -FHFHSQPKV 128
BLAST of Carg14205 vs. NCBI nr
Match:
XP_022989609.1 (uncharacterized protein LOC111486643 [Cucurbita maxima])
HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 124/131 (94.66%), Postives = 125/131 (95.42%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDS STFSSSSSSFPHSSE
Sbjct: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSASTFSSSSSSFPHSSE 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
FFFSGDSPRR RHHHKRNASEMVMRSRAADLFGD+LKM GEGGKKKGGFWSRLMGGRKA
Sbjct: 61 FFFSGDSPRRTRHHHKRNASEMVMRSRAADLFGDKLKMSGEGGKKKGGFWSRLMGGRKA- 120
Query: 121 HFHFHSHPKVS 132
FHFHS PKVS
Sbjct: 121 -FHFHSQPKVS 129
BLAST of Carg14205 vs. NCBI nr
Match:
XP_031745668.1 (uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharacterized protein LOC116406105 [Cucumis sativus] >KAE8637171.1 hypothetical protein CSA_018802 [Cucumis sativus])
HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30
Identity = 87/135 (64.44%), Postives = 94/135 (69.63%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNH LLPGICPSCLRE LQ+F +QS YSDS STFSS SSS SS+
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQF-HQSPNYSDSQSTFSSPSSS---SSD 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKM---------GGEG----GKKKG 120
FFFS DS RR R HH+RNASE V S A DL D+LK GG G GKKK
Sbjct: 61 FFFSADSSRRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKL 120
Query: 121 GFWSRLMGGRKAFHF 123
GFWSRL+ KA +F
Sbjct: 121 GFWSRLLLRPKALYF 131
BLAST of Carg14205 vs. ExPASy TrEMBL
Match:
A0A6J1JPT9 (uncharacterized protein LOC111486643 OS=Cucurbita maxima OX=3661 GN=LOC111486643 PE=4 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 124/131 (94.66%), Postives = 125/131 (95.42%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDS STFSSSSSSFPHSSE
Sbjct: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSASTFSSSSSSFPHSSE 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKMGGEGGKKKGGFWSRLMGGRKAF 120
FFFSGDSPRR RHHHKRNASEMVMRSRAADLFGD+LKM GEGGKKKGGFWSRLMGGRKA
Sbjct: 61 FFFSGDSPRRTRHHHKRNASEMVMRSRAADLFGDKLKMSGEGGKKKGGFWSRLMGGRKA- 120
Query: 121 HFHFHSHPKVS 132
FHFHS PKVS
Sbjct: 121 -FHFHSQPKVS 129
BLAST of Carg14205 vs. ExPASy TrEMBL
Match:
A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 1.6e-30
Identity = 87/135 (64.44%), Postives = 94/135 (69.63%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPNH LLPGICPSCLRE LQ+F +QS YSDS STFSS SSS SS+
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQF-HQSPNYSDSQSTFSSPSSS---SSD 60
Query: 61 FFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKM---------GGEG----GKKKG 120
FFFS DS RR R HH+RNASE V S A DL D+LK GG G GKKK
Sbjct: 61 FFFSADSSRRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKL 120
Query: 121 GFWSRLMGGRKAFHF 123
GFWSRL+ KA +F
Sbjct: 121 GFWSRLLLRPKALYF 131
BLAST of Carg14205 vs. ExPASy TrEMBL
Match:
A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 89/145 (61.38%), Postives = 97/145 (66.90%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSI-YSDSVSTFSSSSSSFPHSS 60
MGKSESAKECKRH NH LPGICPSCLRE LQ+ SSI YSDS ST SSSSF SS
Sbjct: 56 MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRST---SSSSFLKSS 115
Query: 61 EFFFSGDSPRRPRHHHKRNASEMVMRSRAADLFGDELKM-------------GGEGGKKK 120
E FFSG++ R R H RNASE+V S AADLFGD++K GG GGKKK
Sbjct: 116 ESFFSGNTSWRRR--HTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKK 175
Query: 121 GGFWSRLMGGRKAFHFHFHSHPKVS 132
GFWSR + KA +FHSHPKVS
Sbjct: 176 VGFWSRFLVRPKA--LYFHSHPKVS 193
BLAST of Carg14205 vs. ExPASy TrEMBL
Match:
A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 87/136 (63.97%), Postives = 95/136 (69.85%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPN+ LLPGICPSCLRE LQ+F +QS YSDS STFSS SSS SS+
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQF-HQSPNYSDSQSTFSSPSSS---SSD 60
Query: 61 FFFSGDSPRR-PRHHHKRNASEMVMRSRAADLFGDELKM---------GGEG----GKKK 120
FFFS DS RR RHHH+RNASE V S A DL D+LK GG G GKKK
Sbjct: 61 FFFSADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKK 120
Query: 121 GGFWSRLMGGRKAFHF 123
GFWSRL+ KA +F
Sbjct: 121 LGFWSRLLLRPKALYF 132
BLAST of Carg14205 vs. ExPASy TrEMBL
Match:
A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 4.0e-29
Identity = 85/136 (62.50%), Postives = 93/136 (68.38%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSE 60
MGKSESAKECKRHPN+ LLPGICPSCLRE LQ+F +QS YSDS STFSS SSS SS+
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQF-HQSPNYSDSQSTFSSPSSS---SSD 60
Query: 61 FFFSGDSPRR-PRHHHKRNASEMVMRSRAADLFGDELKMGGE-------------GGKKK 120
FFFS DS RR RHHH+RNASE V S A DL D+LK G GKKK
Sbjct: 61 FFFSADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKK 120
Query: 121 GGFWSRLMGGRKAFHF 123
GFWSRL+ KA +F
Sbjct: 121 LGFWSRLLLRPKALYF 132
BLAST of Carg14205 vs. TAIR 10
Match:
AT1G22470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink). )
HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 28/60 (46.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 10 CKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFS-----SSSSSFPHSSEFFFS 65
CK+HP HR PGIC CL ESL + +++ YS S+S+ S SS SS SE FS
Sbjct: 41 CKKHPKHRQSPGICSLCLNESLSKLSSEFYDYSSSMSSSSLAKTMSSCSSASSESESDFS 100
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031272.1 | 2.4e-68 | 100.00 | hypothetical protein SDJN02_05312, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6600636.1 | 7.7e-67 | 99.24 | hypothetical protein SDJN03_05869, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023544931.1 | 2.8e-61 | 94.62 | uncharacterized protein LOC111804380 [Cucurbita pepo subsp. pepo] | [more] |
XP_022989609.1 | 2.8e-61 | 94.66 | uncharacterized protein LOC111486643 [Cucurbita maxima] | [more] |
XP_031745668.1 | 3.4e-30 | 64.44 | uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharact... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JPT9 | 1.4e-61 | 94.66 | uncharacterized protein LOC111486643 OS=Cucurbita maxima OX=3661 GN=LOC111486643... | [more] |
A0A0A0KZB2 | 1.6e-30 | 64.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1 | [more] |
A0A6J1JAI6 | 1.4e-29 | 61.38 | uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218... | [more] |
A0A5A7TS78 | 2.4e-29 | 63.97 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3CZT1 | 4.0e-29 | 62.50 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
Match Name | E-value | Identity | Description | |
AT1G22470.1 | 6.8e-05 | 46.67 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |