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Carg14200 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATCATTAACTCCTCTTGCTTTGAACTCTCCGCTCACAGTTTCCTCTCATCCCCATCAATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATATTCCCATTGAAAAGAGTAAGCTCTCTTTCTAATTTGAAATTGAGGGGTTTTCTTGTTTTTTTCTTATCTGATTTGATTCTCTCCTCAGGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTATTCGTTAAAATTCCTTGTGTGTTTGTGAGTGTATGGGGTTTTGAAGATTCTTGTATTTCTTTCTTATGCATTGTGTTTTGTTCTGCTGTAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGTAATTTCTAAAGCTTTAAACTGAAATTTTGGGATTAAGTGGAATTGTTCATCTGTTTACTCTCTGTGAAATGAACTCTTTTTGAATTTATGAATTATAATTACAAACAGCTAAAACTTTTAATATTTGGATAGAAATGGAGTGGTGAGTGATACTAAGACTGGGGTTTGGATGTCAGTGAACTATGCACCCCGCCTTCATGGAGTAAAAGGGAAGTCCTATATATATATATATATATTTTCCCTACTCTGATTGGAGAAAAGTAAAGTCTTTGAATGCAGTTGAAGCATGTAAATTGAATTATTGAAGCTGTAAGGAAAAATTATGGGAATTAGTGGGATGGGGACTAATCTTGTGGTCTTTATTTGAGTTTGTTAGTTGTTAATTTGTAGTTGGTTGCAGTTTTTAATTAGCTTTCATAGTTGGGTTTCTCGTTGACCAATAAATCTTTGATCGAAAATTAATGGGGTTTTGCATGTGTTTCTTGAAACATGATCTTTATTTGAGTTTGTTAGTTGTTAATTTTTTAATGATAAAGAAACTAACCCTTCATTGATAAAGGAGGCTAGCCGAATAACAACCCAACTACGAAAACCAAAAATGTTTCCTAGTTGAAGAACTTGTTGGAAACTGACTTGCACTATTACTGTGTCACTGTGATATTACACAACCTCTTCATTCAGAGATAACCTGCATGAGTCTGCCTTGTTTCAAGGACAAGCTCAGAAATGTTTCCTAGTGTTGAACACGAACCAATCCTCCTCTGATTAGTACCTAAAGATGGTAGTAGATTGTAGCAATCGGGAATTTTTGGAGTCAGAACTTCTCAAACGTGGTTTAACTATTCACAGGAGGAAACTTCTCGCACAAGGTTGGAAATTGGAAGGATTCTTTCTTGGTTTAGTTGATGATCATATAGGACCTAAGAACATGAAGGATGAATTCTTTTAGCGTTGATGAAGAGGATGAAATCCAATTTTGCTTGAGAATCTTTTCACTCATCTGCGAAATGTTTCATTTACTGTTTCTTTTGATGAATATTTTGTGAACTGTTTTGAGAAATTACTAATTGTTTGAGAACAGTTATCTTTGCACTTGGTTGCAGTTTTGCCACAAATGAAAATTAAGGTGGATTGGTTGACTGTGAAGAGAGGTTTTTTCTTTTTTGATAAATTAGTGTCTGTATAGAGGATTTGCAGCTTATTAGTATATAGTTGGGATATCAGTGTTACTACTCTGATGAGGCATTTAGAGAATAGGGTAGATCGGTTATTTCGGTCATTTGGTACGTGCGCATCATTTCGTAAATGTTTTAGAGGTGGTTGTGAGCACCATCTTATTGCCAACTGAATGAAACGTTCTTTTGTTCTCTACCAAATTGAGTAGCTTAGGACATATGATTTGGTATCCACAGACCCTTCCGACATTAAGGCAATGGTAAAGTGACCCTCACCTAAGTCATCTTGAACGGATGCTAGCTTTTTTGACCTTATAGGCTACTCCTGCAAGTTTGTTGCCAAGAAGGGAACTTTGCTCTAGCCTTGACCAAACAAGTTAAAAAGGATAGTTTTCACCAAAATCATGAAGTTGAAACTGTCACTTAGAATTTGAAGGTTGCTATGAGCCTATGATTGCATCTTTGGAGCTTGATATCTCAGTAGCTTCTAAGATAGAATCTTCTCGGTTCTCCTATTTAGTTTTTAAAATGGGTTATCTTATCTGTAACTACTTAAAGTCATATGTAAGTAAACTCTATCTACCGAGGAGTTTTGCATTTCGGTGTCTCCATGTATATTTCTCCTTACATCTTCTTGATTTTGTTTTTCATGCTCTTCATATAGATCGAGTGTGTGAGTTGAGTGGTCCTAACCGGGGCGGTGTTGATGCGAGGAGAAGACCTTAACATATTATAATCACTCTCCCATTGAAATGAGACATCACTGTCGGAACAGGGGACTTGTGTATCCATCCATCATTCATCCCTAGATATGATCTCCTTGTTGTTATAGTACATAAAGCTCTCTCAATGCTCGGTTTGCAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGACCATTTTTCCCGACTACCTCGGTTCGGTATGTACCAATGCTTGTAGTTTCGATTTGGTTCTTGAGATAAGAATTTGAGAGTTAGGATTGTTCCCTTGAAGGAATATAACTGTGTGAGATCCCATTGAAAAGCTATAACATTATGGACTTCTTCAAATCTATTGTTTCAAACTTTATCCTAAAATTACTGCAAAATAAAGATGAATAATATACAAATTAATATCAAGATATCAAAAGTCAAGAGTAGTTCGGCCTATCAAATGTAATTATCTTAAGTGAAACATTGGAATGATTATCAAATCAATTTATTCAAATTTATTAAATTTCAAACATTACATGTATCTTCCTTCAATAATTCAATTCATTTTAAACTCTAAATAATAAATTGCTTCAA AACATCATTAACTCCTCTTGCTTTGAACTCTCCGCTCACAGTTTCCTCTCATCCCCATCAATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATATTCCCATTGAAAAGAGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGACCATTTTTCCCGACTACCTCGGTTCGGTATGTACCAATGCTTGTAGTTTCGATTTGGTTCTTGAGATAAGAATTTGAGAGTTAGGATTGTTCCCTTGAAGGAATATAACTGTGTGAGATCCCATTGAAAAGCTATAACATTATGGACTTCTTCAAATCTATTGTTTCAAACTTTATCCTAAAATTACTGCAAAATAAAGATGAATAATATACAAATTAATATCAAGATATCAAAAGTCAAGAGTAGTTCGGCCTATCAAATGTAATTATCTTAAGTGAAACATTGGAATGATTATCAAATCAATTTATTCAAATTTATTAAATTTCAAACATTACATGTATCTTCCTTCAATAATTCAATTCATTTTAAACTCTAAATAATAAATTGCTTCAA ATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATATTCCCATTGAAAAGAGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGA MAATSNSLISFTNSPSLNKPRCFLPPPASVSFFRSPSLSFPSNKLPTVRCSLNADVHADPIEGKLDIPIEKRFPAFPTVMDINEIRNILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRDNFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKKFGIAKMEGKAYVGGEVVCEGEFLMAMGKEE Homology
BLAST of Carg14200 vs. NCBI nr
Match: KAG7031267.1 (fabZ [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 452.2 bits (1162), Expect = 2.6e-123 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg14200 vs. NCBI nr
Match: XP_022942061.1 (uncharacterized protein LOC111447250 [Cucurbita moschata]) HSP 1 Score: 451.8 bits (1161), Expect = 3.4e-123 Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg14200 vs. NCBI nr
Match: XP_022982573.1 (uncharacterized protein LOC111481409 [Cucurbita maxima]) HSP 1 Score: 447.2 bits (1149), Expect = 8.3e-122 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg14200 vs. NCBI nr
Match: XP_023513624.1 (uncharacterized protein LOC111778171 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121 Identity = 220/224 (98.21%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg14200 vs. NCBI nr
Match: KAG6600631.1 (hypothetical protein SDJN03_05864, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106 Identity = 201/224 (89.73%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy Swiss-Prot
Match: P73848 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=fabZ PE=3 SV=2) HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39 Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy Swiss-Prot
Match: Q8DI01 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=fabZ PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39 Identity = 80/144 (55.56%), Postives = 112/144 (77.78%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy Swiss-Prot
Match: B0JIT3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=fabZ PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.1e-39 Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy Swiss-Prot
Match: Q3MH14 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=fabZ PE=3 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.0e-38 Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy Swiss-Prot
Match: Q8YUR4 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=fabZ PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.5e-38 Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy TrEMBL
Match: A0A6J1FMU4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111447250 PE=3 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123 Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy TrEMBL
Match: A0A6J1J565 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111481409 PE=3 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.0e-122 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy TrEMBL
Match: A0A6J1EUE3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111436009 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.0e-105 Identity = 196/224 (87.50%), Postives = 204/224 (91.07%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy TrEMBL
Match: A0A6J1JAJ4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111483223 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 9.7e-100 Identity = 190/224 (84.82%), Postives = 198/224 (88.39%), Query Frame = 0
BLAST of Carg14200 vs. ExPASy TrEMBL
Match: A0A0A0KXT9 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis sativus OX=3659 GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96 Identity = 183/224 (81.70%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of Carg14200 vs. TAIR 10
Match: AT2G22230.1 (Thioesterase superfamily protein ) HSP 1 Score: 305.1 bits (780), Expect = 4.8e-83 Identity = 161/221 (72.85%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of Carg14200 vs. TAIR 10
Match: AT5G10160.1 (Thioesterase superfamily protein ) HSP 1 Score: 302.4 bits (773), Expect = 3.1e-82 Identity = 163/224 (72.77%), Postives = 176/224 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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