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Carg14199 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTATGATGATCAAAATCCGGACACAAAAGAAATTTCTCGTCTTGAGCATGATGTGATGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCAAAATTCTTCTCTTCACTTTCTACGTACTTGCTCCTTCTGTCAGCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGTATGTATGAGTCAATTATATCCATTTTTCTTATGTAAACCTCCATAAACTTGATTTTTAGTTGTTGATATGCAGGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCAGTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAAAGATGA ATGTTGCTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTATGATGATCAAAATCCGGACACAAAAGAAATTTCTCGTCTTGAGCATGATGTGATGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCAAAATTCTTCTCTTCACTTTCTACGTACTTGCTCCTTCTGTCAGCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCAGTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAAAGATGA ATGTTGCTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTATGATGATCAAAATCCGGACACAAAAGAAATTTCTCGTCTTGAGCATGATGTGATGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCAAAATTCTTCTCTTCACTTTCTACGTACTTGCTCCTTCTGTCAGCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCAGTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAAAGATGA MLLGNPRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISRLEHDVMNYTFAFASPRGRRSLSQNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSMEQEKCSTAGGGGGRAKER Homology
BLAST of Carg14199 vs. NCBI nr
Match: KAG6600630.1 (FCS-Like Zinc finger 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031266.1 hypothetical protein SDJN02_05306, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257.7 bits (657), Expect = 5.3e-65 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg14199 vs. NCBI nr
Match: XP_023513613.1 (protein MARD1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252.3 bits (643), Expect = 2.2e-63 Identity = 123/127 (96.85%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg14199 vs. NCBI nr
Match: XP_022942060.1 (uncharacterized protein LOC111447249 [Cucurbita moschata]) HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Carg14199 vs. NCBI nr
Match: XP_022983393.1 (protein MARD1-like [Cucurbita maxima]) HSP 1 Score: 237.7 bits (605), Expect = 5.7e-59 Identity = 116/127 (91.34%), Postives = 121/127 (95.28%), Query Frame = 0
BLAST of Carg14199 vs. NCBI nr
Match: XP_022984751.1 (uncharacterized protein LOC111482935 [Cucurbita maxima]) HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32 Identity = 86/146 (58.90%), Postives = 102/146 (69.86%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17 Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.1e-15 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.6e-14 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.1e-08 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.1e-08 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy TrEMBL
Match: A0A6J1FVI2 (uncharacterized protein LOC111447249 OS=Cucurbita moschata OX=3662 GN=LOC111447249 PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.4e-63 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy TrEMBL
Match: A0A6J1J7M6 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111481996 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59 Identity = 116/127 (91.34%), Postives = 121/127 (95.28%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy TrEMBL
Match: A0A6J1J657 (uncharacterized protein LOC111482935 OS=Cucurbita maxima OX=3661 GN=LOC111482935 PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.5e-33 Identity = 86/146 (58.90%), Postives = 102/146 (69.86%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy TrEMBL
Match: A0A6J1EN49 (uncharacterized protein LOC111436011 OS=Cucurbita moschata OX=3662 GN=LOC111436011 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.9e-32 Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of Carg14199 vs. ExPASy TrEMBL
Match: A0A0A0KUK1 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G030990 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 79/130 (60.77%), Postives = 93/130 (71.54%), Query Frame = 0
BLAST of Carg14199 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of Carg14199 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of Carg14199 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 0
BLAST of Carg14199 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Carg14199 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09 Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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