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Carg14166 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCTTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGTTGTCCCTTTTCTTCTTCCTCATAATCATCTTTATTCTCATCGCCATCGCCATCGCCATCGCCGTCGCCGTGTTTCATTCATCAATTTACTCTCATCTGATTCTGCTCTCCTAACTCTTCCTTTCGTATCTGATTTGATTCCTTTTCCAGGCTTTAAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGGTATTGCTTCTTCCCCTTTTCTCGTAGGGTTTTCTTTAATTCGTAATTTCTGTTTATTTGCCTTCTACGTCATTGTTAGCGCTCTGGAAAGTAAGAAAAAGGCTGGAATTTGACGTAATAGCGTCGAATTGGTGTTGTTGGGTGCCTTGGGGCTTAGTTTAGGTTTGATTGTGTCGTGCTCTCCCTATTATCGACAGTGGAGGTTCTTAATTTTTCTTTTGAAATCGAAGTGAGGTTTTCTTGTTACTGTTCTTTGTCTGTAGTGTGTTCTGAAAGGAAATTTACTATCTGCTTTTAGTAGGAATTTGACGTTCATTTTTGGATTTATTTTTTTTTTATTTTATTTTGTTGGAAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTGTATAAACATAATCATTGAATTCTGAGATCATTTCTTCCATAATCCTGTGTAGTGTCTAAATTTATTGATTGTTGTGTGTTGATTTTGTATACCGGTTTCATAACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGGTTGGTATATGGATAATTTTCTATTGCTTGTTCTTGTTGGATATTCTTTTCTTTGTGTGTATACATTTCTTTGTGGTTATATCGTTTGCTTCACCATTTCACTCTATTTATGAGATTGCAATTATGCAGGAATATAAAGTTTATATTCTATTGCCTTCTTCACTCTATTGTTTTTGTTTAGATTTTTTTTTTCCAAATGCGGTCTATAAGGAGTTTTGTTTTTAGTATTTGTGTCAGGGGTCACACTTCAGATGGATGTACAATAATAGTAATGGTGTTTAATTGAATTCGACCCAAGAAGATATCTCAATTGGGGATGTTAATAGATTTTTTACCATACAGTGGCACGTTGCGTGTAAGCTTATCAGTGGTTCATCATGGAGAACCTGAATGATTTAATGTTACAGAAAGGTTTTGATATATATCCTGTCCTATTAGGACAACGTGTTGCTTACATCTATTATGTTCAAAACTTTTCGATTACACAAAATAGAAGTATAAACTAGTCTTGCAATGAAAAATAAAAGAAAAAGAAGAGGAAGTACTGCTTGATATTGGATTCCGTTCTTTTTGTTAATAGCTAGTTTGTATGGATGAAAAGATCCTCTATGCTGAAAAGTTATTGCAGGATGAGTGTTTATCATGGTATTTACTAGGTGTTCATTGGTCGGGTTTGTTTTGAAATCTTTCAACCATTTGGTTATATGTCTATATATGTAATGAATAAGAACAGAACCATACTGCTCAACACTAAAATCCAAAACAATACCAATTCATCCATCAATACGTTTCTTTGTATCATTCGTAACTTCTTTCTACTGTTTGGGAAACTTTTGTTTACCCCCCGCCGAATGTTATGTTTGCTGATTGAAATGAAATATAAATACCATAAAGTTCATCAAATCTGCAAAATGAATAAAGCTAATTTCTATTACATGTTAGATTGTAATTGTTTTATAACTTAAGTCTTTAAAACTTGACTTTAGATTTTACAGGGCATTATTAATCATGTAATATTTTAAATTATTTAGGTGTAAATATTCGATTATTTTAGCAATCTAAGTTTTATTAATCTTTTTCGTTTGGTTTGCTTTAGACAGAAATTTGTCAAGCTGAACCAAACTATCATTGCTGGTTTTGTTTGGTCTGAACAAAAGGAAAGGAATCTCAAACCAAGCTAATTTAGTTTGGATCATTGGTTTGGTCTTGAACACCTCTATCATTTGCAATGGATGTAGTTTGAAGGTGAAGTTGGAAATATGCTTTCTGCAACTTGCTAGTTGCTCAGATGCACATTACCTGCGAGATTGAGATGATGTGTTTTCTAATAATTTAATATGTTGGTGTTAAAGTTTTGTCTTGCCTTTTCCTCTCGTACATGTTTCTAACTATCGATACTGTTTGTTGCTCGTGCTTGTTTGAGTTTTGAATTCTATCCGAGTCGTTTATATCTATTGTATGGCTTTATTTATGGTCTATTATTGGCTTTGTCTGAGTCCTTAGTTATCACCTTCATACCAACACTGACCATTGTTATTTCCCTTCACTCTGAAACCGTGTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGGTCTGTTACACTTCATGCCACTTTGATCCTATTGTATAATTAATATGTTTTTCATGGAGGTGCTGGTAACGAAATTGTTAAGATATAACTTGTAAGGACGTGTTGTGTGTACTAACTTCAACCAGAATCCTTCTCTGACAGTCTTAAATGTTTTCCATTGCAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCGAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGCAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACGAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCTTCCTGGATGAGAACCTCTTCTTAACAAATTTATAAAATCATCAGTAATGCCTCCTTCCTATTACATCACACTGTGTCTTTATA CCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCTTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTAAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCGAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGCAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACGAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCTTCCTGGATGAGAACCTCTTCTTAACAAATTTATAAAATCATCAGTAATGCCTCCTTCCTATTACATCACACTGTGTCTTTATA ATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTAAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCGAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAA MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV Homology
BLAST of Carg14166 vs. NCBI nr
Match: XP_022942312.1 (probable ubiquitin-conjugating enzyme E2 16 [Cucurbita moschata] >XP_022983104.1 probable ubiquitin-conjugating enzyme E2 16 [Cucurbita maxima] >XP_023513778.1 probable ubiquitin-conjugating enzyme E2 16 [Cucurbita pepo subsp. pepo] >KAG6600596.1 putative ubiquitin-conjugating enzyme E2 16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031233.1 putative ubiquitin-conjugating enzyme E2 16 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 340.5 bits (872), Expect = 7.9e-90 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. NCBI nr
Match: XP_022136917.1 (probable ubiquitin-conjugating enzyme E2 16 [Momordica charantia]) HSP 1 Score: 339.3 bits (869), Expect = 1.8e-89 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. NCBI nr
Match: XP_038877729.1 (probable ubiquitin-conjugating enzyme E2 16 [Benincasa hispida]) HSP 1 Score: 338.2 bits (866), Expect = 3.9e-89 Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. NCBI nr
Match: XP_004146492.2 (probable ubiquitin-conjugating enzyme E2 16 [Cucumis sativus] >XP_008452114.1 PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo] >KAA0044779.1 putative ubiquitin-conjugating enzyme E2 16 [Cucumis melo var. makuwa] >KGN53285.1 hypothetical protein Csa_014866 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 5.1e-89 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Carg14166 vs. NCBI nr
Match: XP_022929509.1 (probable ubiquitin-conjugating enzyme E2 18 [Cucurbita moschata] >XP_022985349.1 probable ubiquitin-conjugating enzyme E2 18 [Cucurbita maxima] >XP_023553462.1 probable ubiquitin-conjugating enzyme E2 18 [Cucurbita pepo subsp. pepo] >KAG6577233.1 putative ubiquitin-conjugating enzyme E2 18, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 337.0 bits (863), Expect = 8.7e-89 Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy Swiss-Prot
Match: Q9FWT2 (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=UBC16 PE=2 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 6.7e-84 Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy Swiss-Prot
Match: Q9FMM0 (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=UBC18 PE=2 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 4.4e-83 Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy Swiss-Prot
Match: P42743 (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV=2) HSP 1 Score: 305.1 bits (780), Expect = 4.8e-82 Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy Swiss-Prot
Match: O23239 (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana OX=3702 GN=UBC17 PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.2e-78 Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy Swiss-Prot
Match: Q55EY8 (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum OX=44689 GN=ube2w PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.3e-42 Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy TrEMBL
Match: A0A6J1J6C9 (probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita maxima OX=3661 GN=LOC111481748 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 3.8e-90 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy TrEMBL
Match: A0A6J1FPW6 (probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita moschata OX=3662 GN=LOC111447396 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 3.8e-90 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy TrEMBL
Match: A0A6J1C6S5 (probable ubiquitin-conjugating enzyme E2 16 OS=Momordica charantia OX=3673 GN=LOC111008493 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 8.5e-90 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy TrEMBL
Match: A0A5A7TU62 (Putative ubiquitin-conjugating enzyme E2 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00690 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 2.5e-89 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Carg14166 vs. ExPASy TrEMBL
Match: A0A0A0KUH0 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045000 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 2.5e-89 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Carg14166 vs. TAIR 10
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16 ) HSP 1 Score: 311.2 bits (796), Expect = 4.8e-85 Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 0
BLAST of Carg14166 vs. TAIR 10
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18 ) HSP 1 Score: 308.5 bits (789), Expect = 3.1e-84 Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of Carg14166 vs. TAIR 10
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 305.1 bits (780), Expect = 3.4e-83 Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of Carg14166 vs. TAIR 10
Match: AT4G36410.1 (ubiquitin-conjugating enzyme 17 ) HSP 1 Score: 292.0 bits (746), Expect = 3.0e-79 Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of Carg14166 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 ) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-17 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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