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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGGTTGGATGGATGAGCAAACGCCAAAGGTCACGAACAATGTCCTCTGGTTACAGCTCTAACAATCATCCTCCTCGAAACACCATCACTTTAGATGCTTCAATATTCTTGAAGCCATCCTTGGATTTGTTTCCAGGTTTTGAATAATTTTTTCACTGTTCCTGTTCGGAAATAAAGAACTTTTGGAAACAGGTGTACTCTTAAGGATTAAATCTATTTCGCTACAACAGGCTTCTTGTTCTTATATGTATGATATTTTTATAGATCTAACATGCAGTTCTAAACCTTAAAATTGTATTGGGAGTAGCAAAAGCCAACATTGGCATTGGCATTGGCACCCACTCCTTTCTTCCTCGTGTTGAGGCGTGGTGCAACGCTTCTATAATGGACGTCGACCAACTTGCCTCCATAACCCTGTTCTTCAACCTTCCATTGTTTCTTTACTCCATTTTATAA mRNA sequence ATGGAGGTTGGATGGATGAGCAAACGCCAAAGGTCACGAACAATGTCCTCTGGTTACAGCTCTAACAATCATCCTCCTCGAAACACCATCACTTTAGATGCTTCAATATTCTTGAAGCCATCCTTGGATTTGTTTCCAGTTCTAAACCTTAAAATTGTATTGGGAGTAGCAAAAGCCAACATTGGCATTGGCATTGGCACCCACTCCTTTCTTCCTCGTGTTGAGGCGTGGTGCAACGCTTCTATAATGGACGTCGACCAACTTGCCTCCATAACCCTGTTCTTCAACCTTCCATTGTTTCTTTACTCCATTTTATAA Coding sequence (CDS) ATGGAGGTTGGATGGATGAGCAAACGCCAAAGGTCACGAACAATGTCCTCTGGTTACAGCTCTAACAATCATCCTCCTCGAAACACCATCACTTTAGATGCTTCAATATTCTTGAAGCCATCCTTGGATTTGTTTCCAGTTCTAAACCTTAAAATTGTATTGGGAGTAGCAAAAGCCAACATTGGCATTGGCATTGGCACCCACTCCTTTCTTCCTCGTGTTGAGGCGTGGTGCAACGCTTCTATAATGGACGTCGACCAACTTGCCTCCATAACCCTGTTCTTCAACCTTCCATTGTTTCTTTACTCCATTTTATAA Protein sequence MEVGWMSKRQRSRTMSSGYSSNNHPPRNTITLDASIFLKPSLDLFPVLNLKIVLGVAKANIGIGIGTHSFLPRVEAWCNASIMDVDQLASITLFFNLPLFLYSIL
Homology
BLAST of Carg14158 vs. NCBI nr
Match: KAG7031226.1 (hypothetical protein SDJN02_05266, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.4 bits (529), Expect = 3.1e-50 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 Query: 1 MEVGWMSKRQRSRTMSSGYSSNNHPPRNTITLDASIFLKPSLDLFPVLNLKIVLGVAKAN 60 MEVGWMSKRQRSRTMSSGYSSNNHPPRNTITLDASIFLKPSLDLFPVLNLKIVLGVAKAN Sbjct: 1 MEVGWMSKRQRSRTMSSGYSSNNHPPRNTITLDASIFLKPSLDLFPVLNLKIVLGVAKAN 60
Query: 61 IGIGIGTHSFLPRVEAWCNASIMDVDQLASITLFFNLPLFLYSIL 106 IGIGIGTHSFLPRVEAWCNASIMDVDQLASITLFFNLPLFLYSIL Sbjct: 61 IGIGIGTHSFLPRVEAWCNASIMDVDQLASITLFFNLPLFLYSIL 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031226.1 | 3.1e-50 | 100.00 | hypothetical protein SDJN02_05266, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..24 |
Relationships
The following mRNA feature(s) are a part of this gene:
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