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Carg14156 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAAGAGTCGGGTTGGGCCTCAAAATTTGCTCTGTTATCGTATTTTTGTGCATTCTCCTGTTATTGGTCTTTTTCTTCTGATCTTATTTTTTCAGGTACAGTAACGAACAACACCAATATTGTCTGACAATTCCATCTTCTCTTACTCACTTTGATTCCTTGTTCGTCTTCTTCCTCTTCTTCTTCTTCTTCCCTTTCAATCGCTATCTTCTAATTCCGTTATTCCGCTGCATTTTTCACTTTTCAAGTTTGTTTTTCCACTGTAGTGTATCCCCCTTTTCTTCTGTTCGTGGTGTTCATCATCAGTGTGATTTTCTCGATTATTCTTGCACTTTCTTTCTGGGTTCTGTTCGTTTGTTTGAACCCTCCAATTTGATTGAGATCAGGTGATTTTTGGGGTTTTCACTGGGTGTTTGGTGAACGGATTTTAGGGTTTTGGGGGCGACTTTTTTCTGGCCGATGAGACTACTTTTGGGTCTTTTTTCTTCATCGATTCGAGTTTTGAGTTTTGCTGTCCCTTGCGTATGGATGTCTTTTTAGGAATCTGATCACTTTGAGCTCGGTCTCGCTTTGGATATACTATGTATCATTTGGTGCATTCGTGTTTCGTTTGCTCGATTTTTTTATTTGAGTTTTAGTTAAACCAATTTTGATGAAGGCGTAAGTTGTTTATACTCAGTTATCTACTTGTGTTTCAAAGTATCTTATATGTCCGATGTAGCTTGCGAGATGCTAATTTCGATTCTTTCCTTTGGCTGGCTGATATTGTGTTGCTTAGAAGTTTAAAGTGCTGCCTGAGCGTTCTAAAGGTCTTGGTGTTATATAGATAATTCAAGTATTACATTGATGGTGTTTGTACTGTATGTCTCTTGGATGTCAATGTTTTCCTATTGGGAGCTTATTGTTTTCCATTTTTTTTTTGTGCAAAATTTTGGATAATCAGTTATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGAAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGCTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGTTCGTATGTTTTTTTTTATGTTATATTGCTCTGGTTATCCTAAATGCTCAGTTTGTTTGGTAGATTTTCCTGGATGTTTCAATTTGAGTCTTTTCTTTCGTTATACTCATGGCTTCTTTTATTTTATTTTAACTTGAACTGCACCTATATGATTTCCTATGCACTAAGATTTTGTTTGTACTTGTATTGCTTTGTGAGCCAGCTCATGGCAGACCTTTAGAGCTCAACAGCATGGTTTCACTTAATGGATTTTTCTTACTGTTATTTGTGTTTTTCTCAAGAGACAATCATAGGAAAATGCATTGATTGCAAACGGTTCAAACTCCATGAGCTTAATGATCTTTGTACATGTTTGTTTCAAATAGGCCTTTAAACTTCAAAAAATTTCTAATAGATCCATAAACATTCAATTTTGTGTCTAATAAGTACCTAAATTTGTTAAGGTGTCTAGTAAGTTTCTAAACTTTCGGTTTTATGTTTATTAAGTCCTTGACTTTTGAATTTTGTATCAACTAGATTATTGACTTATTTGACATTTTTTAGAGCTCATGAATATGTTTAGGGACCTTAGACACAAAGTTGGAAGTTTAGCAACTTATTTGACATTGACGAGGGACTTATTATATATAAAGTTCTGGACCGGTTGTACTGGTTATAGTTTAGAGAATTATTAGACACAAACATAAAAGTTTAGAGACTAAACTGGTAATTTGTGGAAGAAAAAATCGATGGTGAGCTGATTTTAAAACTCTTTAGATGTGAGATTGGTTAATAATACTCAGAATGGTAGCTTGCAACTATGATGATGTTATAAATTTTTGTGAAGAATACAGAGAATGGGGCATGGAAATGTGAGTTTGTGTAGTTTGCCTAATAAATAGTTTTCACAGGCTTTTAAATTCTATGAAACAGGCTAGTTGCAAAGACAAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGAAAATGTGAGGTTGAGTGCCCTTCTTGACAAGAAGGAGGCTCAACTTGTGGCCATGAATGAACAATGCAAGGTTATGGCCTTGAGTGCCTCACATATTTAGTCCAGAAACTCCTCCTCCTTGCTCATCAGCCAGCCTAGTAACGCTTCATCTCGGTTCACGATCCCGGGCCAACCAAGGTGTCGGCAGCATCAGGTATTCTTGCATATAAATGTATTTACAAAAACCCTTGTGGAGTATAGTGTGTAGTTCCATAGTGTTCTAGCTCTTCCATCTGCTTCTACGGAGAGAACTCTCAAGGTTTTTGTTCATTGGAGTTTAAACTTGGTTTGTGAATGGTTCCTTGCTTCCGAGATGTGCATGTGTATGCTTCCAAAGTTGGTATCTTTCTGCCCTTTGGCGCCCTTCATAAGTTTCCCTTTTGGCATTACAATTCTTTGTCTTTTGTCAGTTTGATTCAAACTACAATGCTGACATCCTTTTAAGCAGGTTCTGGGCTGCACTCTCATTAACTCCACTGCTTCAATTCCTCCTTCCAAGTTTTAAAAATAGATACATTTGAAAAC AAAAGAAGAGTCGGGTTGGGCCTCAAAATTTGCTCTGTTATCGTATTTTTGTGCATTCTCCTGTTATTGGTCTTTTTCTTCTGATCTTATTTTTTCAGGTACAGTAACGAACAACACCAATATTGTCTGACAATTCCATCTTCTCTTACTCACTTTGATTCCTTGTTCGTCTTCTTCCTCTTCTTCTTCTTCTTCCCTTTCAATCGCTATCTTCTAATTCCGTTATTCCGCTGCATTTTTCACTTTTCAAGTTTGTTTTTCCACTGTAGTGTATCCCCCTTTTCTTCTGTTCGTGGTGTTCATCATCAGTGTGATTTTCTCGATTATTCTTGCACTTTCTTTCTGGGTTCTGTTCGTTTGTTTGAACCCTCCAATTTGATTGAGATCAGTTATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGAAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGCTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGCTAGTTGCAAAGACAAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGAAAATGTGAGGTTGAGTGCCCTTCTTGACAAGAAGGAGGCTCAACTTGTGGCCATGAATGAACAATGCAAGGTTATGGCCTTGAGTGCCTCACATATTTAGTCCAGAAACTCCTCCTCCTTGCTCATCAGCCAGCCTAGTAACGCTTCATCTCGGTTCACGATCCCGGGCCAACCAAGGTGTCGGCAGCATCAGGTATTCTTGCATATAAATGTATTTACAAAAACCCTTGTGGAGTATAGTGTGTAGTTCCATAGTGTTCTAGCTCTTCCATCTGCTTCTACGGAGAGAACTCTCAAGGTTTTTGTTCATTGGAGTTTAAACTTGGTTTGTGAATGGTTCCTTGCTTCCGAGATGTGCATGTGTATGCTTCCAAAGTTGGTATCTTTCTGCCCTTTGGCGCCCTTCATAAGTTTCCCTTTTGGCATTACAATTCTTTGTCTTTTGTCAGTTTGATTCAAACTACAATGCTGACATCCTTTTAAGCAGGTTCTGGGCTGCACTCTCATTAACTCCACTGCTTCAATTCCTCCTTCCAAGTTTTAAAAATAGATACATTTGAAAAC ATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGAAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGCTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGCTAGTTGCAAAGACAAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGAAAATGTGAGGTTGAGTGCCCTTCTTGACAAGAAGGAGGCTCAACTTGTGGCCATGAATGAACAATGCAAGGTTATGGCCTTGAGTGCCTCACATATTTAG MATEEDLDLSTLKTQLSETNGNWKHEMERRQSKVDVLQARLVEVKASIEGSEEDSRKELEVLWRRVTTTSTLLTYLKSKAKMLAVPHLAHSSCGIKHLEGVGFVDKSGTPLSGWSKSIDLSSFDGCEEESLMVIGKPCGLLDEQDAAYIGQILKSVQIVSAVMEALVKRVILAESEAAEEKEKVHLGQEEIKKKSIQIENMSSKLEEMEQFAVGTNGILNEMRLRVEDLVEETCRQRQRAAENEQELCHVKQDFESLKSYVSSLITVRETLLSSEKQFQTIERLFERLVAKTSQLEGEKMQKEVEVQKLMEENVRLSALLDKKEAQLVAMNEQCKVMALSASHI Homology
BLAST of Carg14156 vs. NCBI nr
Match: KAG7031224.1 (hypothetical protein SDJN02_05264 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 633.3 bits (1632), Expect = 1.3e-177 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of Carg14156 vs. NCBI nr
Match: XP_023533912.1 (uncharacterized protein LOC111795613 [Cucurbita pepo subsp. pepo] >XP_023533921.1 uncharacterized protein LOC111795613 [Cucurbita pepo subsp. pepo] >XP_023533929.1 uncharacterized protein LOC111795613 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177 Identity = 343/344 (99.71%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of Carg14156 vs. NCBI nr
Match: XP_022942840.1 (rab11 family-interacting protein 3-like [Cucurbita moschata] >XP_022942841.1 rab11 family-interacting protein 3-like [Cucurbita moschata] >XP_022942842.1 rab11 family-interacting protein 3-like [Cucurbita moschata] >XP_022942843.1 rab11 family-interacting protein 3-like [Cucurbita moschata]) HSP 1 Score: 629.4 bits (1622), Expect = 1.8e-176 Identity = 341/344 (99.13%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of Carg14156 vs. NCBI nr
Match: XP_022981492.1 (uncharacterized protein LOC111480593 isoform X1 [Cucurbita maxima]) HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174 Identity = 339/344 (98.55%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of Carg14156 vs. NCBI nr
Match: XP_022981499.1 (uncharacterized protein LOC111480593 isoform X2 [Cucurbita maxima] >XP_022981509.1 uncharacterized protein LOC111480593 isoform X2 [Cucurbita maxima] >XP_022981516.1 uncharacterized protein LOC111480593 isoform X2 [Cucurbita maxima]) HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174 Identity = 339/344 (98.55%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of Carg14156 vs. ExPASy TrEMBL
Match: A0A6J1FX10 (rab11 family-interacting protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111447751 PE=4 SV=1) HSP 1 Score: 629.4 bits (1622), Expect = 8.8e-177 Identity = 341/344 (99.13%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of Carg14156 vs. ExPASy TrEMBL
Match: A0A6J1IWS1 (uncharacterized protein LOC111480593 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480593 PE=4 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 6.3e-175 Identity = 339/344 (98.55%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of Carg14156 vs. ExPASy TrEMBL
Match: A0A6J1IU42 (uncharacterized protein LOC111480593 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480593 PE=4 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 6.3e-175 Identity = 339/344 (98.55%), Postives = 340/344 (98.84%), Query Frame = 0
BLAST of Carg14156 vs. ExPASy TrEMBL
Match: A0A6J1JBJ1 (uncharacterized protein LOC111482964 OS=Cucurbita maxima OX=3661 GN=LOC111482964 PE=4 SV=1) HSP 1 Score: 587.4 bits (1513), Expect = 3.8e-164 Identity = 319/344 (92.73%), Postives = 331/344 (96.22%), Query Frame = 0
BLAST of Carg14156 vs. ExPASy TrEMBL
Match: A0A6J1EMY4 (uncharacterized protein LOC111435964 OS=Cucurbita moschata OX=3662 GN=LOC111435964 PE=4 SV=1) HSP 1 Score: 584.3 bits (1505), Expect = 3.2e-163 Identity = 317/344 (92.15%), Postives = 331/344 (96.22%), Query Frame = 0
BLAST of Carg14156 vs. TAIR 10
Match: AT2G17990.1 (BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). ) HSP 1 Score: 337.8 bits (865), Expect = 1.0e-92 Identity = 201/349 (57.59%), Postives = 266/349 (76.22%), Query Frame = 0
BLAST of Carg14156 vs. TAIR 10
Match: AT5G66250.1 (kinectin-related ) HSP 1 Score: 283.5 bits (724), Expect = 2.3e-76 Identity = 181/344 (52.62%), Postives = 238/344 (69.19%), Query Frame = 0
BLAST of Carg14156 vs. TAIR 10
Match: AT5G66250.2 (kinectin-related ) HSP 1 Score: 283.5 bits (724), Expect = 2.3e-76 Identity = 181/344 (52.62%), Postives = 238/344 (69.19%), Query Frame = 0
BLAST of Carg14156 vs. TAIR 10
Match: AT5G66250.3 (kinectin-related ) HSP 1 Score: 283.5 bits (724), Expect = 2.3e-76 Identity = 181/344 (52.62%), Postives = 238/344 (69.19%), Query Frame = 0
BLAST of Carg14156 vs. TAIR 10
Match: AT5G66250.4 (kinectin-related ) HSP 1 Score: 271.6 bits (693), Expect = 9.0e-73 Identity = 181/364 (49.73%), Postives = 238/364 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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