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Carg14143 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGTTTTCGTTTTCTTTTTCATCGTGTCTGTGGATGAGGGCGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAAAAGGTATTTCTCTTCGTTTCTTTCTTCTTTCTTTTGTTTGTCTTCTTTGATTTTTGCCCATATAGGTTGATTTTGCGTTATGTTGACTGTGACCACTTCACTTCTGCAATGAGAATCTGGTGGATTGATAATTGAATCATGGATTATTGGCCCTTTAGAATTCTGGGTTGTCCTTACATATGTGTCTGCATTTGATAATTGTATTGCTGGTGGATCTTGTACTTGATCAGAGGAATCTCTTCCTGTGGCTGTTAGGTGACTTTGGAGGAAGGCTTTTGTTGCTGTCAATTCAGCAAGAAATATGCTTCATATTCTGCATTGCCTTGGATCTCTCTCAGCAATCTATCTTTAAAGGACAAATTCTCATGTTGACTGACACAGAAACATGATCACTCATTGAATTTATATAAAACAAGTGCCTGAGGGCTGTTCTGTTGGATATTTAACATCAGGATTTGTCTGCTTGGATGATAATTTGACTGATCTTTGACCACTTGGTTTTGATGTCGGGACCTCCTGTGGTTGTCTGTGAGATACTACAACGGTTGGAGAGGGAAACGAAGCATTCTTTATAAGGGTGTAGAAACCTCTCTCTAGTACTCGTTTTAAAACCTTGAGCGGAAACCCATAAAGGAAAGCCTAATATGCTAGTGGTGGGTTTGAACTGATTACAAATGTTATCGGAGTCAGTCATCGGGGGTGTGCTGGTGGATTGTGAGATCGCACATCAGTTGGAGAGGGGAATGAAGCATTTTGTGGAAACTCTCCCTAGTAGATTTGTTTTAAAACTTGAGGGGAATGGGCAAGCCCAAAGAGAACAATGTCGGCTAGTGGTGGGCCTAGGCTGTTACACTGTCATTCAAGTGTAGCTCGGGAGTTTATCGATTCCCTTTTCAAGGATAATAGATTGATATTTGATGTGACTATATATTATTCTCACTCAGTTTTATGCCATCAAATTCTTTCCTACTTGCTGCTGTCCTCTAAGTTGTGTTTGTTTCATATCAAAAAACTTAAAGCTGAAGCTGAAATCTTAATAAATATGTTGTAAACTTGTTATGAAAGGTCCATCTGTGCAATAAACTAGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGGTATGGACGTTTTTCCTTCTGTTTTTTTGTACTTGTTAGCTTTGTTATGTACCGCGATTCGGGACAGTCTAGTTAACTTAGATGTAAATTGCTTGCAGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGGTTGGTCGATAGATTGCGATACGACCTTGTGTGTTTTCCAGCTACATAAGAATTGGAACTTTGAACTTGTTTCTTTTTCAGTTTCCAGGAGATAAACCTATAAACCTTGATGAGCCGTCTCCACATTCCAAGGTTCCCAATAATGTCGGTAGAGGGCATAACCAGACACTGCAGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGACTATCGCCTGTTCGGGAGGCTAATGATGACGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTCTAG GTTTGTTTTCGTTTTCTTTTTCATCGTGTCTGTGGATGAGGGCGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAAAAGGTCCATCTGTGCAATAAACTAGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAACCTTGATGAGCCGTCTCCACATTCCAAGGTTCCCAATAATGTCGGTAGAGGGCATAACCAGACACTGCAGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGACTATCGCCTGTTCGGGAGGCTAATGATGACGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTCTAG ATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAAAAGGTCCATCTGTGCAATAAACTAGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAACCTTGATGAGCCGTCTCCACATTCCAAGGTTCCCAATAATGTCGGTAGAGGGCATAACCAGACACTGCAGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGACTATCGCCTGTTCGGGAGGCTAATGATGACGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTCTAG MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKVPNNVGRGHNQTLQHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQAANNQVQLLFLISSSIVSTVCF Homology
BLAST of Carg14143 vs. NCBI nr
Match: KAG7031211.1 (B-box zinc finger protein 19 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 414.1 bits (1063), Expect = 7.0e-112 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Carg14143 vs. NCBI nr
Match: KAG6600571.1 (B-box zinc finger protein 19, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Carg14143 vs. NCBI nr
Match: XP_022942801.1 (B-box zinc finger protein 18-like [Cucurbita moschata]) HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101 Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Carg14143 vs. NCBI nr
Match: XP_023547603.1 (B-box zinc finger protein 18-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.0 bits (972), Expect = 2.5e-101 Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of Carg14143 vs. NCBI nr
Match: XP_022982911.1 (B-box zinc finger protein 18-like [Cucurbita maxima]) HSP 1 Score: 377.1 bits (967), Expect = 9.5e-101 Identity = 179/184 (97.28%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2) HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57 Identity = 116/184 (63.04%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 8.7e-57 Identity = 116/183 (63.39%), Postives = 130/183 (71.04%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.5e-20 Identity = 53/122 (43.44%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy TrEMBL
Match: A0A6J1FPW7 (B-box zinc finger protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111447727 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 5.4e-102 Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy TrEMBL
Match: A0A6J1J0P6 (B-box zinc finger protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111481613 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.6e-101 Identity = 179/184 (97.28%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy TrEMBL
Match: A0A5A7TTU1 (B-box zinc finger protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001060 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98 Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy TrEMBL
Match: A0A0A0KUM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047370 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95 Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 0
BLAST of Carg14143 vs. ExPASy TrEMBL
Match: A0A6J1JBD7 (B-box zinc finger protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111482919 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94 Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 0
BLAST of Carg14143 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.3e-58 Identity = 116/184 (63.04%), Postives = 132/184 (71.74%), Query Frame = 0
BLAST of Carg14143 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein ) HSP 1 Score: 221.5 bits (563), Expect = 6.2e-58 Identity = 116/183 (63.39%), Postives = 130/183 (71.04%), Query Frame = 0
BLAST of Carg14143 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51 Identity = 116/226 (51.33%), Postives = 130/226 (57.52%), Query Frame = 0
BLAST of Carg14143 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40 Identity = 88/150 (58.67%), Postives = 99/150 (66.00%), Query Frame = 0
BLAST of Carg14143 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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