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Carg14137 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGGGATCATCATCATCATCATATATATATATATATAAACAACCAAAATTAGGGTTTGAACTTTCCTTGGTTGCCAATTTTGGTTTTGGTTCAGATCAGATCATGAGCAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCGTTGGGGTATCTTTTTGGAAACGACGATGAACCCAGAAAGCCTCAAGTCTCAAAAGTGGTTCTTCCTCCTCCTTATGGAATTGATATCAACCCTGATGACCAAAACAACCCTTCCCCCTCTCCAAAACAAGCTGCCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCGGGCAACTTCATCACGGTAAACCCCCTCTCTACTTTGTTCTTGAGATTTCAAATCATGGGATTTAAAAATGATTTCTTGAAAATTCTCAGGATCGCCCATCAACCAAGGTCAAATCTGTTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGAAGTGAAGTGAATGATTTATGTGTTCCATTAGTAGCTGATCATATTGGAACTCTAAAGGGTATGTATGCTTTGCTTTAGTGTGCGGATTTGTAATAAATTGTGTGCAATTATTATGTATCTCAACCAACACTTAGACTGAATTATATTTCTGTACTTTGTTGCTTCTACCAAATATGTTATGTATTCAATAGCATCTTGCCGACTTGTGGTTTGATTATGTTTGTGGTTAAGTATAAGAAATTCCACTTTTCCTTT ATAGGGATCATCATCATCATCATATATATATATATATAAACAACCAAAATTAGGGTTTGAACTTTCCTTGGTTGCCAATTTTGGTTTTGGTTCAGATCAGATCATGAGCAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCGTTGGGGTATCTTTTTGGAAACGACGATGAACCCAGAAAGCCTCAAGTCTCAAAAGTGGTTCTTCCTCCTCCTTATGGAATTGATATCAACCCTGATGACCAAAACAACCCTTCCCCCTCTCCAAAACAAGCTGCCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCGGGCAACTTCATCACGGATCGCCCATCAACCAAGGTCAAATCTGTTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGAAGTGAAGTGAATGATTTATGTGTTCCATTAGTAGCTGATCATATTGGAACTCTAAAGGGTATGTATGCTTTGCTTTAGTGTGCGGATTTGTAATAAATTGTGTGCAATTATTATGTATCTCAACCAACACTTAGACTGAATTATATTTCTGTACTTTGTTGCTTCTACCAAATATGTTATGTATTCAATAGCATCTTGCCGACTTGTGGTTTGATTATGTTTGTGGTTAAGTATAAGAAATTCCACTTTTCCTTT ATGAGCAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCGTTGGGGTATCTTTTTGGAAACGACGATGAACCCAGAAAGCCTCAAGTCTCAAAAGTGGTTCTTCCTCCTCCTTATGGAATTGATATCAACCCTGATGACCAAAACAACCCTTCCCCCTCTCCAAAACAAGCTGCCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCGGGCAACTTCATCACGGATCGCCCATCAACCAAGGTCAAATCTGTTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGA MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK Homology
BLAST of Carg14137 vs. NCBI nr
Match: XP_022941576.1 (protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like 5 [Cucurbita maxima] >XP_023545276.1 protein SPIRAL1-like 5 [Cucurbita pepo subsp. pepo] >KAG6600565.1 Protein SPIRAL1-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031205.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.5 bits (519), Expect = 4.2e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg14137 vs. NCBI nr
Match: XP_038883008.1 (protein SPIRAL1-like 5 [Benincasa hispida]) HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44 Identity = 92/101 (91.09%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Carg14137 vs. NCBI nr
Match: XP_022136791.1 (protein SPIRAL1-like 5 [Momordica charantia]) HSP 1 Score: 184.5 bits (467), Expect = 4.4e-43 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of Carg14137 vs. NCBI nr
Match: XP_008452039.1 (PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa] >TYK16640.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa]) HSP 1 Score: 183.7 bits (465), Expect = 7.6e-43 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Carg14137 vs. NCBI nr
Match: XP_004146520.1 (protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_015032 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42 Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy Swiss-Prot
Match: Q8LGD1 (Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25 Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.0e-18 Identity = 55/114 (48.25%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 55/115 (47.83%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 54/106 (50.94%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.1e-15 Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy TrEMBL
Match: A0A6J1J7K0 (protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy TrEMBL
Match: A0A6J1FLH4 (protein SPIRAL1-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111446889 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy TrEMBL
Match: A0A6J1C4I1 (protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy TrEMBL
Match: A0A5D3CZ49 (Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004680 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.7e-43 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Carg14137 vs. ExPASy TrEMBL
Match: A0A1S3BTQ0 (protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.7e-43 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Carg14137 vs. TAIR 10
Match: AT4G23496.1 (SPIRAL1-like5 ) HSP 1 Score: 117.1 bits (292), Expect = 8.1e-27 Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of Carg14137 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 ) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 54/106 (50.94%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Carg14137 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 ) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 54/106 (50.94%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Carg14137 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 ) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 55/115 (47.83%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of Carg14137 vs. TAIR 10
Match: AT2G03680.1 (spiral1 ) HSP 1 Score: 80.9 bits (198), Expect = 6.5e-16 Identity = 50/115 (43.48%), Postives = 61/115 (53.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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