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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTTCGCTGCAACTTTACAAGGTCTTTTCTTGCAGCCCTTGCTGGTGGATTCACTTTATTGATGTGGTCGAGGCTCGAAATGACTGGCTCATGGTTTCATCAGTTTTCCTGATACATTGGCAAAAAAACAAACTACACTTTTCTGCAAAGTAGTCAACTGTTTAAATTATATGGGAAGGGGAGGATTGGTAGTATGCTTGTAATTTCTGTATAGTACTATTAGCTTTTGTCATATTTCTGTTAGGCTATTGTGTTATGTTTGTTTCTGCTGATAAATGGGCAAATATCTTTTGTTAACACTATACATTCAATCATTCAATGCTCTTCTAAATGTTGTTTATAATCAAATTCGTCCTGCCTGGTAACATAGAGATTTCAGTGAAGAATGGAGGGGAAGAAGGAAAACAATCGAAAGAATGTAGAACAATACTGTTCATTCGTATCATGCTATGATACTTTTTATAAGAGTATAAAAACCTCTCTCTAGTAGATACGTTTTAAAAACCTTAGGGGGAAGCCTGACAAGAAAAATTCAAAGAGAATCATATCTGCTAGTGGTAAGTTTGAGCCGCTGCGGAAAAGTTTGAACTCCACTTTGTATGATTTAAAGAAGCAGAAAGGAAACGATGAATGATTTAAAGAAGCAGAAAGGAAACGATGAACTTCCAGACAGAAATATAAAAATGCATGCATATAGCATTAAGTTGGTCCAATGCAGACCACTTCTGTTCATTTTTTGTCAATATTTCCCACCCTTTTATACACAGATGACTAACTATTAACGTTAAGAATCATAACAATAAATTCTGTACATTTAGATTTGGTCACCAGAAAATATCATCAACTGCTGTCTTCGTTGATGGAGACTGTTCATCTTCCTCCAACTCCATCTCCAACTCTGGCTCTCCAGAACCAAATTCAGAGGATTCGATATCAGCGAGATTCTTCAAATCAACGACCGTGAGCTCATTAAGATGCCTCACCACCAAGTCTGCAGCCCCGAGTTCATAA mRNA sequence ATGCTTCGCTGCAACTTTACAAGATTTGGTCACCAGAAAATATCATCAACTGCTGTCTTCGTTGATGGAGACTGTTCATCTTCCTCCAACTCCATCTCCAACTCTGGCTCTCCAGAACCAAATTCAGAGGATTCGATATCAGCGAGATTCTTCAAATCAACGACCGTGAGCTCATTAAGATGCCTCACCACCAAGTCTGCAGCCCCGAGTTCATAA Coding sequence (CDS) ATGCTTCGCTGCAACTTTACAAGATTTGGTCACCAGAAAATATCATCAACTGCTGTCTTCGTTGATGGAGACTGTTCATCTTCCTCCAACTCCATCTCCAACTCTGGCTCTCCAGAACCAAATTCAGAGGATTCGATATCAGCGAGATTCTTCAAATCAACGACCGTGAGCTCATTAAGATGCCTCACCACCAAGTCTGCAGCCCCGAGTTCATAA Protein sequence MLRCNFTRFGHQKISSTAVFVDGDCSSSSNSISNSGSPEPNSEDSISARFFKSTTVSSLRCLTTKSAAPSS
Homology
BLAST of Carg14131 vs. NCBI nr
Match: KAG7031199.1 (hypothetical protein SDJN02_05239, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 Query: 1 MLRCNFTRFGHQKISSTAVFVDGDCSSSSNSISNSGSPEPNSEDSISARFFKSTTVSSLR 60 MLRCNFTRFGHQKISSTAVFVDGDCSSSSNSISNSGSPEPNSEDSISARFFKSTTVSSLR Sbjct: 1 MLRCNFTRFGHQKISSTAVFVDGDCSSSSNSISNSGSPEPNSEDSISARFFKSTTVSSLR 60
Query: 61 CLTTKSAAPSS 72 CLTTKSAAPSS Sbjct: 61 CLTTKSAAPSS 71
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031199.1 | 4.9e-28 | 100.00 | hypothetical protein SDJN02_05239, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 25..45 |
Relationships
The following mRNA feature(s) are a part of this gene:
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