Carg13989 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13989
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NDR1/HIN1-like protein
Location	Carg_Chr02: 6714077 .. 6714712 (+)
RNA-Seq Expression	Carg13989
Synteny	Carg13989

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

mRNA sequence

ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

Coding sequence (CDS)

ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

Protein sequence

MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL

Homology

[Close]

BLAST of Carg13989 vs. NCBI nr
Match: KAG7035776.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.0 bits (1068), Expect = 1.9e-112
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. NCBI nr
Match: XP_023533460.1 (NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-like protein 26, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDK YKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. NCBI nr
Match: XP_022957698.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEF LRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTL+QPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. NCBI nr
Match: XP_022996419.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 3.1e-110
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDK YKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPN+KMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. NCBI nr
Match: XP_038906799.1 (NDR1/HIN1-like protein 26 [Benincasa hispida])

HSP 1 Score: 348.6 bits (893), Expect = 3.8e-92
Identity = 175/211 (82.94%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ+LK+ K YKKLFL  SA LSTISLLILLLWLIL PSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQELKVHKRYKKLFLGVSAFLSTISLLILLLWLILHPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPN ++GI+YD LQVYAAYKGQQIT+ TSLP FYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAAYKGQQITLPTSLPPFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
             ++SNLLTAFLAGSSVPVAPSFGYEVG+DQSAGRFVL +KAMGRLRWK+GSWVSG YRF
Sbjct: 121 AYQDSNLLTAFLAGSSVPVAPSFGYEVGKDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLP  PLTL+ PTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPMPPLTLNHPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 120/213 (56.34%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+  + SPKHCA K  + ++  +KKLF   S   S + L+I L+WLIL P +PEF+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNLI--DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN+K+GI+YD+L VYAAY+GQQIT   SLP F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRY 180
           YQ  EE NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           RFNV+C+A++ FG  + T PL   Q TRCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of Carg13989 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 78/172 (45.35%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 22  KHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLI--DLHLLNSSIQ 81
           K  +++F +    L  I L ILL+W IL+PSKP F L+ A VY  N+     +LL S+ Q
Sbjct: 13  KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 82  LTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV 141
           +TLSS+NPN K+GI+YD+L VYA Y+ QQIT  TS+P  YQG ++ ++ + F+ G+SVP+
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 142 APSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
           AP  G  +  D+  G  +L I+A GR+RWK+G++++G+Y  +V C A + FG
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFG 184

[Close]

BLAST of Carg13989 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-34
Identity = 67/149 (44.97%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 38  ISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQ 97
           + + I L+W+IL+P+KP F L+ A VY  NL   +LL S+ Q+T++S+N N ++GI+YD+
Sbjct: 32  VLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDR 91

Query: 98  LQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFV 157
           L VYA Y+ QQIT+ T++P  YQG +E N+ + F+ G+SVP+AP     +G +Q+ G   
Sbjct: 92  LHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVT 151

Query: 158 LKIKAMGRLRWKLGSWVSGRYRFNVDCVA 187
           L I+A GR+RWK+G+ ++G+Y  +V C A
Sbjct: 152 LIIRADGRVRWKVGTLITGKYHLHVRCQA 180

[Close]

BLAST of Carg13989 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.9e-12
Identity = 46/178 (25.84%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 35  LSTISLLI----LLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQK 94
           L TI++L+    L++WLI RP+  +F +  A + +  L   + L  ++ L  + +NPN++
Sbjct: 52  LITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRR 111

Query: 95  MGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSS-VPVAPSFGYEVGR 154
           +G++YD+++V   Y  Q+  M  ++  FYQG + + ++   L G   V +      ++  
Sbjct: 112 IGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNE 171

Query: 155 DQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFGPTLPTAPLTLSQPTRC 208
           D ++  + +  K   ++R+K G   S R++  + C   +P   T  +    + QPT+C
Sbjct: 172 DVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPL--TSNSTSGFVFQPTKC 227

[Close]

BLAST of Carg13989 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 45/173 (26.01%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 38  ISLLILLLWLILRPSKPEFALRQADVYQLNLIDL-HLLNSSIQLTLSSKNPNQKMGIFYD 97
           + +  L+ WLI+RP   +F +  A + + +     ++L  ++ LT+  +NPN+++G++YD
Sbjct: 52  LGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYD 111

Query: 98  QLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV-APSFGYEVGRDQSAGR 157
           +++ +A Y+G++ +  T  P FYQG + + +LT    G ++ +        +  ++ +G 
Sbjct: 112 RIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGV 171

Query: 158 FVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAV-MPFGPTLPTAPLTLSQPTRC 208
           + ++IK   R+R+KLG     R +  VDC  + +P   +  T   +   P +C
Sbjct: 172 YNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKC 223

[Close]

BLAST of Carg13989 vs. ExPASy TrEMBL
Match: A0A6J1H101 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.7e-111
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEF LRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTL+QPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. ExPASy TrEMBL
Match: A0A6J1K8N8 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDK YKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPN+KMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of Carg13989 vs. ExPASy TrEMBL
Match: A0A1S3AUK3 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92
Identity = 176/212 (83.02%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E+NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QPTRCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of Carg13989 vs. ExPASy TrEMBL
Match: A0A5D3C6B2 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00100 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 176/212 (83.02%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E+NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QPTRCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of Carg13989 vs. ExPASy TrEMBL
Match: A0A0A0KN27 (NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]

BLAST of Carg13989 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 120/213 (56.34%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+  + SPKHCA K  + ++  +KKLF   S   S + L+I L+WLIL P +PEF+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNLI--DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN+K+GI+YD+L VYAAY+GQQIT   SLP F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRY 180
           YQ  EE NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           RFNV+C+A++ FG  + T PL   Q TRCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of Carg13989 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-38
Identity = 73/166 (43.98%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 21  DKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQL 80
           +K  K++       L+ +  ++ L+W IL P  P F L+ A +Y  N+   + L S++Q+
Sbjct: 14  EKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNLQV 73

Query: 81  TLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVA 140
           TLSS+NPN K+GIFYD+L +YA+Y+ QQ+T+ T LP  YQG  +  + + FL G++VPVA
Sbjct: 74  TLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVA 133

Query: 141 PSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVA 187
           P F   + +D +AG  +L IK  G +RWK+G+WVSGRYR +V+C A
Sbjct: 134 PYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPA 179

[Close]

BLAST of Carg13989 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 78/172 (45.35%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 22  KHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLI--DLHLLNSSIQ 81
           K  +++F +    L  I L ILL+W IL+PSKP F L+ A VY  N+     +LL S+ Q
Sbjct: 13  KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 82  LTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV 141
           +TLSS+NPN K+GI+YD+L VYA Y+ QQIT  TS+P  YQG ++ ++ + F+ G+SVP+
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 142 APSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
           AP  G  +  D+  G  +L I+A GR+RWK+G++++G+Y  +V C A + FG
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFG 184

[Close]

BLAST of Carg13989 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 148.3 bits (373), Expect = 7.0e-36
Identity = 74/162 (45.68%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 32  SATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLI--DLHLLNSSIQLTLSSKNPNQ 91
           S  L  I ++ILL+W IL+PSKP F L+ A V+  N+     +LL S+ Q TLSS+NPN 
Sbjct: 25  SIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPND 84

Query: 92  KMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGR 151
           K+GI+YD+L VYA+Y+ QQIT+ + +   YQG +E N+ + F+ G SVPVAP   + + +
Sbjct: 85  KIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYSVPVAPYNAFYLDQ 144

Query: 152 DQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
           D S+G  +L +   GR+RWK+GS+++G+Y  +V C A++ FG
Sbjct: 145 DHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFG 186

[Close]

BLAST of Carg13989 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 71/167 (42.51%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 25  KKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSS 84
           +KL  A  A +  + + I L+W+ILRP+KP F L+ A VY  NL   +LL S+ Q+T++S
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 85  KNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFG 144
           +NPN K+GI+YD+L VYA Y  QQIT+ T++P  YQG +E N+ + F+ G++VP+AP   
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 145 YEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
             +G ++  G   L I+A G +RWK+ + ++G+Y  +V C A +  G
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLG 183

The following BLAST results are available for this feature:

BLAST of Carg13989 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035776.1	1.9e-112	100.00	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533460.1	1.1e-110	99.05	NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-l...	[more]
XP_022957698.1	1.4e-110	98.58	NDR1/HIN1-like protein 26 [Cucurbita moschata]	[more]
XP_022996419.1	3.1e-110	98.58	NDR1/HIN1-like protein 26 [Cucurbita maxima]	[more]
XP_038906799.1	3.8e-92	82.94	NDR1/HIN1-like protein 26 [Benincasa hispida]	[more]

BLAST of Carg13989 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	1.6e-64	56.34	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SRN0	1.8e-36	45.35	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	3.8e-34	44.97	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FNH6	6.9e-12	25.84	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	1.5e-11	26.01	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Carg13989 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H101	6.7e-111	98.58	NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=...	[more]
A0A6J1K8N8	1.5e-110	98.58	NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1	[more]
A0A1S3AUK3	2.4e-92	83.02	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1	[more]
A0A5D3C6B2	3.1e-92	83.02	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KN27	1.6e-91	82.55	NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1	[more]

BLAST of Carg13989 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53730.1	1.1e-65	56.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G44220.1	4.4e-38	43.98	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	1.3e-37	45.35	NDR1/HIN1-like 1	[more]
AT5G06330.1	7.0e-36	45.68	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	2.0e-35	42.51	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 81..184 e-value: 2.0E-10 score: 41.1
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 13..210
None	No IPR available	PANTHER	PTHR31415:SF133	BNAA02G10130D PROTEIN	coord: 13..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13989-RA	Carg13989-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma