Carg13555 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13555
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ferroxidase
Location	Carg_Chr02: 700483 .. 704471 (+)
RNA-Seq Expression	Carg13555
Synteny	Carg13555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGATGTAACAATGGCTACCAAGCTGCTTCCTCTGCGTAAGCTTTCAAGGATACTGAAGGTGCCGTCTTTTTTATCTTCTTCCTCCTCTTCTTCTTTCAGGAAGTATTCGTATCTTCTAGAATCTACAAGACCTCTCCTCGATCTCTCCGATAATGTTCATCAATTTCATCCTCCGTCTTTTTCTCGAAGTTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCCACCATTGATTATAGGTAAATTCTTTATTTTCCGTTTGTAAGAGAAACTATGTATTTGAATCGAAATTTTGAAGAAGCGGAAGTTTGTAAGTTCATCCAATTTTTGTTTTGCAATCTTGAAGCCTTTCAAATTAGGTAATTGATTTTCGAATTTTTGGTCCTAACTAAACTAAGAGTAGGTTCGTGTTTCTTCAACGAAGTGTTATGGATGTCTTACATTCAGTTCAATTTCCCTTGATTGAACAAATTACGACTGCCTTTCATGGGGTTTTCTTTAGTAGTTGAATGCATCTGGTAGAAAAGGGCTCAAGTGCTCTTCACTAATCTTTGCTGCAGTTCCCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTGCAAGAGAAATTAGAGGTAATTGTGTATCAATGAAATGAAAATCTTTTTGCCCTTGATTTTATCTTATAAACTAAAGGAAGGTAATAGCTTATATGTTTCATATACATATTTCGGCATTGCTGCTAAAATTTTGTTTATCTATATTTCATTGCTTGGCAGGAATATGGTGATGATCTCCAAATTGATGGCTTTGACGTAGATTATGGGGTGAGAATGACTTAGAAGCTCTAAAATTTGTTCATTTCATTTCATATGAATAGGTAATGCTTAATTTTATCCAATTTTCATTTTAGAACGAGGTACTGACCCTAAGGCTCGGCTATCTTGGCACGTACGTCTTGAACAAACAAACGCCTAACAGACAAATTTGGCTTTCTTCTCCTGTGAGGTACGAATTATGCTTCAGTATTGACTCATTCTCCTGCTGAATGATTAGTATCTATGATGTTTATCTATTCCATCTGTTTCAAAGACCATTTCAAACCAGAGGTGGTGTTAGGAACCACGAACCTCCACAATGGTATGGTATTGTTCACTTTGAGCATAAGCTCTCATGAATTTACTTTTGGTTTCTCCAAAAGGTCTCATACCAATAAAGATGTATTCCTTACTTATAAACCCATGATCAATCCCTTAATTAGCCGACGTGGGACTCTTCTTCCAACAATCCTCCCCTTGAACAAAGTATTGATCCCTTAATTAGCCGACGTGGGACTCCTCTTCCAACAATCCTCCCCTTGAACAAAGTATACCATAGAGCCTCCCCTGAGACTTATGGAGCCCTCGGACAACCTCCCCTTAATTGAGGCTCGGCTCCTTCTTTGGAAAGAACACAACTTATTTGTTCGACATTTGAGAATTCTACTGACATGACTACGTTAAGGGCATGTCTCTGATACCATATTAGGAACCACGAACCCCCACAATAGTATGATATTCTTCACTTTGAGCATAATCTCTCGTGGCTTTGCTTTTGGTTTCTCCAAAAGGCCCCATACCAATGAATATGTAGTTCTTACTTATAAACCCATGATCAACCCCTTAATTAACCGACGTGGGATTCTTCTTCTAACAATTCTCAGCACGTTGTCCCTGATTCAATTTCATGGCGAAGCTTTGCGCTCGTCTTTCGACATCTTTACCAAAAAAAAATGGAATTTTTTTCTGTTCATCTAACATTTACCCATCCCTAGATGTCTTTATCTTATATTAAAGGAGAAAATAAGGAATGAAACTACTTCGAGTTTGGTCCTGAGAGAACAAAGAGCTCAAACATAGAGGTTGATTATTCAAATATTCAAGCATTGTACACAATTTTGTGACGACCCAAGACATAGTTTGGCAAAGCTCTTCATTTTTTTTTAAAATTACGTGACAACCCATGTTATGTTCTTCCTTGCAGTGGTCCGTCCAGGTTTGATTGGGATCAGGACTCACAGGCTTGGATTTATAGGCGGAGCAAAGCAAACCTGTTGAGACTTTTAGAAACTGAATTGACGCAGCTATGTGGTGAGCCAATTAATCTTTCTTGAGCCTTTCGAATTACTTGGACATGATAAGGTTATTCTGAAGCATTTAGGCGCATGTTTATGCAGCTTGTTCAGTTTGGTCCACCTTCTTAAGTATCCCAGAGCCCCCATCTTTTTTCTCGTTTTCACTCTCTGTTGCTTATTATATGCAATAATATGATATAGTTTCTAGTGTTTCAACTTTACCTATTTATGATCCACTTGAGCTATATTCAAACTTACCGAGATATAATTAATCTTTTAGAAGGTCAAAGATTTCAACTCCCACTTTTATATGCATATATATATATATATATATGTACACACACAATCCTATGATAAGTTTGGTCAGAGGGGAGTTGGAACATTCAATGAAATTGTAAAATGTGATGAAAACTTTCAGTATGAGGTTTGAATAAGTTAAACATAACAGAGATTAACGCTAGGGAGAGGTTTTCATACCCTTATAAAAAATATTTTGTTTCCCTCTCTATCAAAGTGGGATCATACAATCCACCTCTTTAGGAGTCATTGTTTTCGCTAGCACATTGCTTGTTTTCTGGCTCTGATATCATTTGTAATAGTCCAAGTCGACCACTAGCGGATATTGAATTCTTTGATTTTCCCTTTTGAGCTTTCCTTCCATAGTTTTATGATATTATTTATATATAAAAATACTAGAGGATAAGTGGAGTAATTGATATAATACAAAGGAGAGTGAATAAAACAAGGAACAATACATATTTCCATTGATATTAAAAATTCAAATCTTCACCCCTTGGAACGAAAAGTCAGCCTCCTACATTTAATTAAGATAGGTTCATGTTCTTTTTTTTTTATTATTATTAAAAATTCGATGTAGCTTGGTTAACAAATTGGGTCGGTGGAAGCCAAAGCCAAGGCCAAGTCTGGAATGAAAAGAGGTGAGTTGACGAGAAAAGCCCATCCCCACGACATGATTTAGGCAAAGTCAAAGATTGTTGCAGACATTAAAATGACAACAACAGCCTTCTCAAAGCTTCCACGAAGGCGAGATGCAATTGCAGTCCCGTTGAGGCAACCGGACTCTTCTCTCTGTCCCTGCGCTGTCTATTGCTGAAGAAGAAAGAGATCGCATCTAACCCAATTTCTCCGTCTTTTCTTCTTCCCTTTCTTCTCACTTTATAAATCCCACTTTCATCCAACCCCAAGTTCCCAAGTTCCCAAATTCAAATTCAAATTCATCCTGTTCTTAATTAATGGCCAGAAAGAGTGCTGCTTTCCACGATTTGCTGCCTGTAATGGCAGAGCAATTAGGGGGAGAGGGCCTGATAAACGAGCTGTGTAATGGGTTTCAGCTGCTGATGGACAAGGAGAAGGGCGTCATCACGTTGGACAGCCTCCGGTTAAACTCTTCCCTTTTGGGTCTGCGGGACATGGGAGAGGCGGAGCTTCTCAGCATGATGACAGAGGGCGATTTGGATGGCGATGGCGCTTTGAACCAGATGGAGTTTTGTGTATTGATGTTTAGATTAAGCCCTGAGCTTATGGAACACTCTTTGTCTTTCCTTCAACACGCTTTCCACAACCAGTTGAAGACCTGCTGATCATTTCTCTTGTTTCAGCACGCTCTCCGACGACAGCCATGGCTTGGGCAATGGCTAAGCGAGGAATAGGAAGCCTCTGCATTTCCAATTACCCCAGGGTCGCTGTGTTACTCTGTTCTATGTCGATAACTCAGTGGTTTTGAAATAGTTAAAATTATTTTTATTGTATCTTTGTTTTTATTCAACACCAAATTCAGGTTTGCCATTGCCAACGACTCTGTTTGAATTAGAAACATGAAAGATTTAACCACACAACCCT

mRNA sequence

GAGGATGTAACAATGGCTACCAAGCTGCTTCCTCTGCGTAAGCTTTCAAGGATACTGAAGGTGCCGTCTTTTTTATCTTCTTCCTCCTCTTCTTCTTTCAGGAAGTATTCGTATCTTCTAGAATCTACAAGACCTCTCCTCGATCTCTCCGATAATGTTCATCAATTTCATCCTCCGTCTTTTTCTCGAAGTTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCCACCATTGATTATAGTTCCCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTGCAAGAGAAATTAGAGGAATATGGTGATGATCTCCAAATTGATGGCTTTGACGTAGATTATGGGAACGAGGTACTGACCCTAAGGCTCGGCTATCTTGGCACGTACGTCTTGAACAAACAAACGCCTAACAGACAAATTTGGCTTTCTTCTCCTGTGAGTGGTCCGTCCAGGTTTGATTGGGATCAGGACTCACAGGCTTGGATTTATAGGCGGAGCAAAGCAAACCTGTTGAGACTTTTAGAAACTGAATTGACGCAGCTATGTGACATTAAAATGACAACAACAGCCTTCTCAAAGCTTCCACGAAGGCGAGATGCAATTGCAGTCCCGTTGAGGCAACCGGACTCTTCTCTCTGTCCCTGCGCTCTGCTGATGGACAAGGAGAAGGGCGTCATCACGTTGGACAGCCTCCGGTTAAACTCTTCCCTTTTGGGTCTGCGGGACATGGGAGAGGCGGAGCTTCTCAGCATGATGACAGAGGGCGATTTGGATGGCGATGGCGCTTTGAACCAGATGGAGTTTTGTGTATTGATGTTTAGATTAAGCCCTGAGCTTATGGAACACTCTTTGTCTTTCCTTCAACACGCTTTCCACAACCAGTTGAAGACCTGCTGATCATTTCTCTTGTTTCAGCACGCTCTCCGACGACAGCCATGGCTTGGGCAATGGCTAAGCGAGGAATAGGAAGCCTCTGCATTTCCAATTACCCCAGGGTCGCTGTGTTACTCTGTTCTATGTCGATAACTCAGTGGTTTTGAAATAGTTAAAATTATTTTTATTGTATCTTTGTTTTTATTCAACACCAAATTCAGGTTTGCCATTGCCAACGACTCTGTTTGAATTAGAAACATGAAAGATTTAACCACACAACCCT

Coding sequence (CDS)

ATGGCTACCAAGCTGCTTCCTCTGCGTAAGCTTTCAAGGATACTGAAGGTGCCGTCTTTTTTATCTTCTTCCTCCTCTTCTTCTTTCAGGAAGTATTCGTATCTTCTAGAATCTACAAGACCTCTCCTCGATCTCTCCGATAATGTTCATCAATTTCATCCTCCGTCTTTTTCTCGAAGTTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCCACCATTGATTATAGTTCCCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTGCAAGAGAAATTAGAGGAATATGGTGATGATCTCCAAATTGATGGCTTTGACGTAGATTATGGGAACGAGGTACTGACCCTAAGGCTCGGCTATCTTGGCACGTACGTCTTGAACAAACAAACGCCTAACAGACAAATTTGGCTTTCTTCTCCTGTGAGTGGTCCGTCCAGGTTTGATTGGGATCAGGACTCACAGGCTTGGATTTATAGGCGGAGCAAAGCAAACCTGTTGAGACTTTTAGAAACTGAATTGACGCAGCTATGTGACATTAAAATGACAACAACAGCCTTCTCAAAGCTTCCACGAAGGCGAGATGCAATTGCAGTCCCGTTGAGGCAACCGGACTCTTCTCTCTGTCCCTGCGCTCTGCTGATGGACAAGGAGAAGGGCGTCATCACGTTGGACAGCCTCCGGTTAAACTCTTCCCTTTTGGGTCTGCGGGACATGGGAGAGGCGGAGCTTCTCAGCATGATGACAGAGGGCGATTTGGATGGCGATGGCGCTTTGAACCAGATGGAGTTTTGTGTATTGATGTTTAGATTAAGCCCTGAGCTTATGGAACACTCTTTGTCTTTCCTTCAACACGCTTTCCACAACCAGTTGAAGACCTGCTGA

Protein sequence

MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRSFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETELTQLCDIKMTTTAFSKLPRRRDAIAVPLRQPDSSLCPCALLMDKEKGVITLDSLRLNSSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHNQLKTC

Homology

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BLAST of Carg13555 vs. NCBI nr
Match: KAG7034944.1 (Frataxin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 609.4 bits (1570), Expect = 1.7e-170
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELTQLCDIKMTTTAFSKLPRRRDAIAVPLRQPDSSLCPCALLMDKEKGVITLDSLRL 240
           LETELTQLCDIKMTTTAFSKLPRRRDAIAVPLRQPDSSLCPCALLMDKEKGVITLDSLRL
Sbjct: 181 LETELTQLCDIKMTTTAFSKLPRRRDAIAVPLRQPDSSLCPCALLMDKEKGVITLDSLRL 240

Query: 241 NSSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHN 300
           NSSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHN
Sbjct: 241 NSSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHN 300

Query: 301 QLKTC 306
           QLKTC
Sbjct: 301 QLKTC 305

[Close]

BLAST of Carg13555 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS
Sbjct: 29  MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 88

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 89  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 148

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL
Sbjct: 149 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 208

Query: 181 LETELTQLC 190
           LETELTQLC
Sbjct: 209 LETELTQLC 217

[Close]

BLAST of Carg13555 vs. NCBI nr
Match: XP_022947402.1 (frataxin, mitochondrial [Cucurbita moschata])

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELTQLC 190
           LETELTQLC
Sbjct: 181 LETELTQLC 189

[Close]

BLAST of Carg13555 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 4.6e-99
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLE TRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRL DSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELTQLC 190
           LETEL QLC
Sbjct: 181 LETELAQLC 189

[Close]

BLAST of Carg13555 vs. NCBI nr
Match: XP_023533562.1 (frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 5.1e-98
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLE TRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLM EGEFHRLADSTIHGLQEKLEE+GDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSP SGPSRFDWDQDSQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELTQLC 190
           LETEL QLC
Sbjct: 181 LETELAQLC 189

[Close]

BLAST of Carg13555 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 6.6e-48
Identity = 105/185 (56.76%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 8   LRKLSRILKV-PSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQ--FHPPSFSRSFCSR 67
           LRKL R LK+ P+ L    S+  R  S L++ +   LD    +     H    +RSF   
Sbjct: 9   LRKLPRFLKLSPTLL---RSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSF--- 68

Query: 68  PLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNE 127
                   S+GPA++DYSS++QE EFH+LA+ TI+ L EK+E+YGD++QIDGFD+DYGNE
Sbjct: 69  -------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNE 128

Query: 128 VLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETE 187
           VLTL+LG LGTYVLNKQTPNRQIW+SSPVSGPSRFDWD+D+ AWIYRR++A L +LLE E
Sbjct: 129 VLTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEE 180

Query: 188 LTQLC 190
           L  LC
Sbjct: 189 LENLC 180

[Close]

BLAST of Carg13555 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+D  S + E  + RLA+ T+  L E  E+  D    ++ +DV +G+ VLT++L G
Sbjct: 76  RNLGTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTIKLGG 135

Query: 134 YLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETELTQLCDI 193
            LGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y     +L  LL  ELT+  + 
Sbjct: 136 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLARELTKALNT 195

Query: 194 KMTTTAFS 200
           K+  ++ +
Sbjct: 196 KLDLSSLA 201

[Close]

BLAST of Carg13555 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+  +  + +  + RLA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 80  RTAGTLGDAGTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 139

Query: 134 YLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETELTQLCDI 193
            LGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y     +L  LL TELTQ    
Sbjct: 140 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGRNWVYSHDGVSLHELLATELTQALKT 199

Query: 194 KMTTTAFS 200
           K+  +A +
Sbjct: 200 KLDLSALA 205

[Close]

BLAST of Carg13555 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-20
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+ +   + E  + RLA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 79  RKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 138

Query: 134 YLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETELTQLCDI 193
            LGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y     +L  LL  ELT+    
Sbjct: 139 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLAAELTKALKT 198

Query: 194 KMTTTAFS 200
           K+  ++ +
Sbjct: 199 KLDLSSLA 204

[Close]

BLAST of Carg13555 vs. ExPASy Swiss-Prot
Match: O74831 (Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1183.03c PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 79  IDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGYLGTYVL 138
           + ++  + + E+HR+AD T+  L +  E+  +++    +D+ Y N V+TL LG  GTYV+
Sbjct: 36  VRHNGALTDLEYHRVADDTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVI 95

Query: 139 NKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETELTQ 188
           NKQ P  QIWLSSPVSGP  +++   S+ W   R +  LL +L +E ++
Sbjct: 96  NKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFSK 144

[Close]

BLAST of Carg13555 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.7e-102
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELTQLC 190
           LETELTQLC
Sbjct: 181 LETELTQLC 189

[Close]

BLAST of Carg13555 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.2e-99
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLE TRPLLDLSDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRL DSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELTQLC 190
           LETEL QLC
Sbjct: 181 LETELAQLC 189

[Close]

BLAST of Carg13555 vs. ExPASy TrEMBL
Match: A0A6J1CG34 (Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90
Identity = 170/189 (89.95%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPLRKLSRILKVPS  SS SS  FR+YSYLLE++RPLL +SDNVHQFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPS-SSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFV DDSRGPA+IDYSSLMQEG+FHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTL+LG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180

Query: 181 LETELTQLC 190
           LETEL +LC
Sbjct: 181 LETELAELC 188

[Close]

BLAST of Carg13555 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-83
Identity = 160/189 (84.66%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60
           MATKLLPL KLSRILK+P    SSSS SFRK  YLLE++ PL+ +S+NVHQF PPSFS+S
Sbjct: 1   MATKLLPLHKLSRILKLP----SSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLD VGDDSRGPATIDYSSLMQEGEFHRLAD TI GLQEKLEEYGD+LQIDGFDVD
Sbjct: 61  FCSRPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVD 120

Query: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+S+AWIYRR+KANLL L
Sbjct: 121 YGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSL 180

Query: 181 LETELTQLC 190
           LETEL QLC
Sbjct: 181 LETELMQLC 185

[Close]

BLAST of Carg13555 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 6.6e-83
Identity = 156/186 (83.87%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 4   KLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRSFCS 63
           KLLPLRKLSRILK+PS+    SS SFRK+ +LLE++ PL+ + +NVHQFHPPSF RSFCS
Sbjct: 35  KLLPLRKLSRILKLPSY----SSCSFRKFPHLLEASSPLIHIFNNVHQFHPPSFLRSFCS 94

Query: 64  RPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGN 123
           RPLD VGDDSRGPATIDYSSLMQEGEFHRLAD  I GLQEKLEEYGD+LQIDGFDVDYGN
Sbjct: 95  RPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQIDGFDVDYGN 154

Query: 124 EVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLET 183
           EVLTLRLG LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+SQ WIYRR+KANLL LLET
Sbjct: 155 EVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNKANLLSLLET 214

Query: 184 ELTQLC 190
           ELTQLC
Sbjct: 215 ELTQLC 216

[Close]

BLAST of Carg13555 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-49
Identity = 105/185 (56.76%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 8   LRKLSRILKV-PSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQ--FHPPSFSRSFCSR 67
           LRKL R LK+ P+ L    S+  R  S L++ +   LD    +     H    +RSF   
Sbjct: 9   LRKLPRFLKLSPTLL---RSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSF--- 68

Query: 68  PLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNE 127
                   S+GPA++DYSS++QE EFH+LA+ TI+ L EK+E+YGD++QIDGFD+DYGNE
Sbjct: 69  -------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNE 128

Query: 128 VLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRLLETE 187
           VLTL+LG LGTYVLNKQTPNRQIW+SSPVSGPSRFDWD+D+ AWIYRR++A L +LLE E
Sbjct: 129 VLTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEE 180

Query: 188 LTQLC 190
           L  LC
Sbjct: 189 LENLC 180

[Close]

BLAST of Carg13555 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-18
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 224 LLMDKEKGVITLDSLRLN-SSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRL 283
           LLMDK+KGVIT +SLR N S++LGL D+ + ++  M+ EGD D DGALNQMEFCVLMFRL
Sbjct: 45  LLMDKDKGVITFESLRRNASTVLGLGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRL 104

Query: 284 SPELMEHS 291
           SPELME S
Sbjct: 105 SPELMEAS 112

[Close]

BLAST of Carg13555 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 180 LLETELTQLCDIKMTTTAFSKLPRRRDAIAVPLRQPDSSLCP-CALLMDKEKGVITLDSL 239
           LLET  T     KM T     LP   + + V   +  S LC   +LL D E+ +IT +SL
Sbjct: 9   LLETTST----TKMETKYEDMLPVMAEKMDV--EEFVSELCKGFSLLADPERHLITAESL 68

Query: 240 RLNSSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAF 299
           R NS +LG+  M + +   M+ EGDLDGDGALNQ EFCVLM RLSPE+ME + ++L+ A 
Sbjct: 69  RRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKAL 126

Query: 300 HNQL 303
             +L
Sbjct: 129 TQEL 126

[Close]

BLAST of Carg13555 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 224 LLMDKEKGVITLDSLRLN-SSLLGLRDMGEAELLSMMTEGDLDGDGALNQMEFCVLMFRL 283
           LLMD+EKGVIT +SLR N +++LGL D+ + ++  M+ EGD D DGALNQMEFCVLMFRL
Sbjct: 45  LLMDREKGVITFESLRRNAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRL 104

Query: 284 SPELMEHS 291
           SP+LME S
Sbjct: 105 SPDLMEAS 112

The following BLAST results are available for this feature:

BLAST of Carg13555 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034944.1	1.7e-170	100.00	Frataxin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6604827.1	3.4e-102	100.00	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947402.1	3.4e-102	100.00	frataxin, mitochondrial [Cucurbita moschata]	[more]
XP_022971111.1	4.6e-99	97.35	frataxin, mitochondrial [Cucurbita maxima]	[more]
XP_023533562.1	5.1e-98	96.30	frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg13555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	6.6e-48	56.76	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
O35943	2.4e-21	42.19	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q05B87	6.9e-21	42.19	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
Q16595	4.5e-20	40.63	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]
O74831	1.4e-18	38.53	Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of Carg13555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6C8	1.7e-102	100.00	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]
A0A6J1I2E7	2.2e-99	97.35	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1CG34	1.1e-90	89.95	Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1	[more]
A0A1S3BJ48	1.3e-83	84.66	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]
A0A0A0KAC6	6.6e-83	83.87	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]

BLAST of Carg13555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	4.7e-49	56.76	frataxin homolog	[more]
AT5G54490.1	4.3e-18	69.12	pinoid-binding protein 1	[more]
AT2G46600.1	2.1e-17	45.97	Calcium-binding EF-hand family protein	[more]
AT4G27280.1	2.1e-17	66.18	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 123..138 score: 37.5 coord: 138..153 score: 81.25 coord: 85..103 score: 36.84
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 85..196 e-value: 7.1E-44 score: 161.8
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 87..190 e-value: 1.6E-21 score: 74.2
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 85..190 e-value: 1.1E-35 score: 121.9
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 29..194
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 85..193 score: 28.17531
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 254..282 e-value: 0.0085 score: 25.3
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 229..281 e-value: 1.1E-15 score: 57.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 250..285 score: 9.157488
None	No IPR available	GENE3D	1.10.238.10		coord: 223..304 e-value: 4.7E-11 score: 44.6
IPR017789	Frataxin	TIGRFAM	TIGR03422	TIGR03422	coord: 89..186 e-value: 1.3E-34 score: 116.4
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 77..202 e-value: 7.4E-40 score: 137.7
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 76..191
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 263..275
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 137..151
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 229..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13555-RA	Carg13555-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0018283	iron incorporation into metallo-sulfur cluster
biological_process	GO:0006811	ion transport
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0034986	iron chaperone activity