Carg13547 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13547
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1218)
Location	Carg_Chr02: 736334 .. 737592 (+)
RNA-Seq Expression	Carg13547
Synteny	Carg13547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATAGAAAGAAGAAAAGGATACCATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTACTCATTTGAAAACAACGCATAACCATGAGTTGAATGGTGATGATTTGAACTCTGTAATGTGGTTATTGTGTAGGTGAAGCACTTGCGTCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTTTCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGTTTTCACCTGGTAAGTTTGTGCGTATTAAGCTTACAAAATCAGATGTTAGGTTAAGTGTAATACCAAGTTCAATGCTAGTAAATCTTGTCTTTTTTGGACTTACACTTAAGAATTTTAAAACGATATTGTCCTCTTTGGACTTTCCCGTAAGAATTTTAAAACGATATTGTCCTTCTTGAACTTTCCCTCAAGGGTTTCAAAATGGTTTTCCCTCAAGGGTTTCAAAATGGTTTATCCCCTTCCAACTTTAAAAGTTTTAAAATGCGTATGCTAGAGTGTAATAAAATATTGTTCTATGCTAAAGTGTAAATAAATATTGTCCTCTTTAGACTTTGTGTGATGTCCCACATTAGTTGCGGAGGAGAACAAACCACCCTTTATAAGAGTGTGGAAACTTTGACCTAGCAGACGCGTTTTAAAACTTTGAGGGGAAGCCCGAAAGGAAAAGGCCAAAGAGGACAATATCTGGTAGCGGTGGGCCGAGATTGTTTTAAAGCCTTGAGGGGGGAAGCCCGACAGGAAAAGCCCAAAGAGGACAGTATCTGCTAGCTATGGGCGTGGATTGTTACACTTTTCCTAAATGTTTTAAAACGAGTCTGATATAGAGAAGTTTTCACACCATTATAAAAATGTTTCGTTATGGGATCACGTTAAGAGTCTTAATTTGTGTTTTTGTTTTTGTTTTGAAGGATAATTCTAGCGGTGGGAATGTCGTTGCTGGTGATTGGGGCATTGGCGAACAGTAAATCAAGAACTTCTTGTGGATTTTCGCATCATCACTTTCTGTCGATGGGAGGGATTTTGTGTTTCATTCATGGCTTGTTTTGTGTTGCTTATTATGTTTCTTCCACGGTTGCTTATTAA

mRNA sequence

TTTGATAGAAAGAAGAAAAGGATACCATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTGAAGCACTTGCGTCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTTTCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGTTTTCACCTGGATAATTCTAGCGGTGGGAATGTCGTTGCTGGTGATTGGGGCATTGGCGAACAGTAAATCAAGAACTTCTTGTGGATTTTCGCATCATCACTTTCTGTCGATGGGAGGGATTTTGTGTTTCATTCATGGCTTGTTTTGTGTTGCTTATTATGTTTCTTCCACGGTTGCTTATTAA

Coding sequence (CDS)

ATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTGAAGCACTTGCGTCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTTTCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGTTTTCACCTGGATAATTCTAGCGGTGGGAATGTCGTTGCTGGTGATTGGGGCATTGGCGAACAGTAAATCAAGAACTTCTTGTGGATTTTCGCATCATCACTTTCTGTCGATGGGAGGGATTTTGTGTTTCATTCATGGCTTGTTTTGTGTTGCTTATTATGTTTCTTCCACGGTTGCTTATTAA

Protein sequence

MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY

Homology

[Close]

BLAST of Carg13547 vs. NCBI nr
Match: XP_022947582.1 (uncharacterized protein LOC111451405 [Cucurbita moschata] >KAG6604839.1 hypothetical protein SDJN03_02156, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034952.1 hypothetical protein SDJN02_01745 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 5.0e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK
Sbjct: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY 159
           SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
Sbjct: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY 158

[Close]

BLAST of Carg13547 vs. NCBI nr
Match: XP_023533398.1 (uncharacterized protein LOC111795298 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80
Identity = 155/158 (98.10%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWII+AVGMSLLVIGALANSK
Sbjct: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIIVAVGMSLLVIGALANSK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY 159
           SRTSCGFSHHHFLSMGGILCF+HGLFCVAYYVSSTVAY
Sbjct: 121 SRTSCGFSHHHFLSMGGILCFVHGLFCVAYYVSSTVAY 158

[Close]

BLAST of Carg13547 vs. NCBI nr
Match: XP_022971119.1 (uncharacterized protein LOC111469886 [Cucurbita maxima])

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 153/157 (97.45%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK
Sbjct: 61  LGLAHIIANLLGGFNCICYKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SRTSCGF+HHHFLSMGGILCF+HGLFCVAYYVSSTVA
Sbjct: 121 SRTSCGFTHHHFLSMGGILCFVHGLFCVAYYVSSTVA 157

[Close]

BLAST of Carg13547 vs. NCBI nr
Match: XP_008455827.1 (PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 6.6e-73
Identity = 138/157 (87.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGG NCICS++ELEKSPPN+QISI CLVFTWIILAVGMS+LVIGA+ N+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 157

[Close]

BLAST of Carg13547 vs. NCBI nr
Match: XP_004151872.1 (uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical protein Csa_021781 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 8.6e-73
Identity = 137/157 (87.26%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL+FTWIILAVGMS+LVIGA+ N+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 157

[Close]

BLAST of Carg13547 vs. ExPASy TrEMBL
Match: A0A6J1G6V2 (uncharacterized protein LOC111451405 OS=Cucurbita moschata OX=3662 GN=LOC111451405 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.4e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK
Sbjct: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY 159
           SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY
Sbjct: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVAY 158

[Close]

BLAST of Carg13547 vs. ExPASy TrEMBL
Match: A0A6J1I7N7 (uncharacterized protein LOC111469886 OS=Cucurbita maxima OX=3661 GN=LOC111469886 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 153/157 (97.45%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK
Sbjct: 61  LGLAHIIANLLGGFNCICYKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SRTSCGF+HHHFLSMGGILCF+HGLFCVAYYVSSTVA
Sbjct: 121 SRTSCGFTHHHFLSMGGILCFVHGLFCVAYYVSSTVA 157

[Close]

BLAST of Carg13547 vs. ExPASy TrEMBL
Match: A0A1S3C1S7 (uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 138/157 (87.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGG NCICS++ELEKSPPN+QISI CLVFTWIILAVGMS+LVIGA+ N+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 157

[Close]

BLAST of Carg13547 vs. ExPASy TrEMBL
Match: A0A0A0LR43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 137/157 (87.26%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL+FTWIILAVGMS+LVIGA+ N+K
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 157

[Close]

BLAST of Carg13547 vs. ExPASy TrEMBL
Match: A0A6J1FUW3 (uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC111449022 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 133/157 (84.71%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLVCLL+VAMDIVAGLL IEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSK 120
           LGLAH+IANLLGG NCICS+E LEKSPPNKQISI CLVFTWIILAV MS+LVIGAL N+K
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           SR SCGF+HHHFLS+GGILCF+HGLFCVAYYV++T A
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 157

[Close]

BLAST of Carg13547 vs. TAIR 10
Match: AT2G32280.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-57
Identity = 97/156 (62.18%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 2   KLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLL 61
           K+ G+LVCL+IV +D+ A +L I+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L
Sbjct: 3   KIGGILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLWLFECREPSQDAFRLGLGAAAIL 62

Query: 62  GLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSKS 121
            +AH++ NL+GG  CICS++E ++S   +QIS+ CLV TWI+ AVG   +VIG ++NSKS
Sbjct: 63  VMAHVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNSKS 122

Query: 122 RTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           R+SCGF+HHHFLS+GGILCF+H LFCVAYYVS+T A
Sbjct: 123 RSSCGFTHHHFLSIGGILCFLHALFCVAYYVSATAA 158

[Close]

BLAST of Carg13547 vs. TAIR 10
Match: AT4G21310.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 208.4 bits (529), Expect = 4.3e-54
Identity = 96/154 (62.34%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 4   VGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGL 63
           VG  +C+LI+AMD+ AG+L IEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL L
Sbjct: 5   VGFFICILILAMDVSAGILGIEAEIAQNKVKHLKMWIFECRDPSYTAFKYGLAACILLVL 64

Query: 64  AHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGALANSKSRT 123
           AH+ AN LGG  C+ S+++LEKS  NKQ+++  L+FTWIILA+  S+L++G +ANS+SR 
Sbjct: 65  AHVTANFLGGCLCVASRQDLEKSSANKQLAVASLIFTWIILAIAFSMLIVGTMANSRSRK 124

Query: 124 SCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           +CG SHH  LS+GGILCF+HGLF VAYY+S+T +
Sbjct: 125 NCGISHHRVLSIGGILCFVHGLFAVAYYISATAS 158

[Close]

BLAST of Carg13547 vs. TAIR 10
Match: AT1G11500.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 4   VGVLVCLLIVAMDIVAGLLAIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLG 63
           +G LV ++I+  DI A +L IEA+IAQ+K       +H R     C R PS+ AF  G+ 
Sbjct: 5   LGFLVSVVIICADITATVLGIEAEIAQSKAPHHHHQQHSRHSGSGCRRSPSDGAFAEGVA 64

Query: 64  AAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLVFTWIILAVGMSLLVIGAL 123
           A  LL + H++AN+LGG   I SK++ +++  NK +++  LV +WI   V  S L+IG L
Sbjct: 65  AMVLLFIVHVLANVLGGCTYIRSKQDFKRATANKILAVAFLVLSWIFFVVSYSTLMIGTL 124

Query: 124 ANSKSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           ANS++   C   H  F  +GGI C  HG+   AYYVS+  A
Sbjct: 125 ANSRTNRLCSLPHRWFFLIGGIFCLGHGVVTSAYYVSAIAA 165

[Close]

BLAST of Carg13547 vs. TAIR 10
Match: AT1G05291.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 6   VLVCL-LIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLA 65
           ++VC+ L V +DIVAG + ++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  A
Sbjct: 17  IIVCIVLTVGLDIVAGFVGLQAQAAQQYVKHDKL---ECKAPSKTAFVLGIIAVSCLATA 76

Query: 66  HIIANLLGGFNCICSK--EELEKSPPNK---QISIGCLVFTWIILAVGMSLLVIGALANS 125
           H+ AN++G   C  S   + L   P NK     ++ CL   W++   G  +L  G  +N+
Sbjct: 77  HVSANVIG---CSISNLFQALGALPKNKITTYFNMACLFLIWVVGIFGALILANGIWSNT 136

Query: 126 KSRTSCGFSHHHFLSMGGILCFIHGLFCVAYYVSSTVA 158
           +SR  C F+++H  S+GG +CF+H +    YY+SS VA
Sbjct: 137 ESRIRCRFTNNHVFSIGGKVCFLHAIVSGIYYISSIVA 168

The following BLAST results are available for this feature:

BLAST of Carg13547 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947582.1	5.0e-81	100.00	uncharacterized protein LOC111451405 [Cucurbita moschata] >KAG6604839.1 hypothet...	[more]
XP_023533398.1	1.9e-80	98.10	uncharacterized protein LOC111795298 [Cucurbita pepo subsp. pepo]	[more]
XP_022971119.1	4.7e-79	97.45	uncharacterized protein LOC111469886 [Cucurbita maxima]	[more]
XP_008455827.1	6.6e-73	87.90	PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]	[more]
XP_004151872.1	8.6e-73	87.26	uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical ...	[more]

BLAST of Carg13547 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg13547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6V2	2.4e-81	100.00	uncharacterized protein LOC111451405 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1I7N7	2.3e-79	97.45	uncharacterized protein LOC111469886 OS=Cucurbita maxima OX=3661 GN=LOC111469886...	[more]
A0A1S3C1S7	3.2e-73	87.90	uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=...	[more]
A0A0A0LR43	4.2e-73	87.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1	[more]
A0A6J1FUW3	1.6e-69	84.71	uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]

BLAST of Carg13547 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32280.1	2.4e-57	62.18	Protein of unknown function (DUF1218)	[more]
AT4G21310.1	4.3e-54	62.34	Protein of unknown function (DUF1218)	[more]
AT1G11500.1	9.3e-25	40.99	Protein of unknown function (DUF1218)	[more]
AT1G05291.1	2.1e-21	38.61	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 57..144 e-value: 3.2E-18 score: 66.0
None	No IPR available	PANTHER	PTHR31769:SF54	BNAA05G10770D PROTEIN	coord: 2..157
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13547-RA	Carg13547-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010588	cotyledon vascular tissue pattern formation
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0010087	phloem or xylem histogenesis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane