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Carg13157 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCCGAGGAAAGCAGAAGATCGAAGCTCAGAAACGAAATGCGGAGAAGAATCAGAAGCCCAAGGGCTCACAATTCGAGGCCAGAGCCGTTGCCCTTAAAGTTATCTGCCCTATTTGCAAGGTTCTCATCTTCTCCAATCTTCGTTGCTCTTATACGACTCTATTGGATTCGAGTGTTCATTTGTTCATTTTTAATCTCGATTCTGGTCTTAATTAATGTTATGTGTTGAAGCAACTGGCAATCCCATATCTGGCAACCAAAATGAAATCATCCTTTTTCTTGCCTGTTCTCTGTTCTTGCTTTAAATACACTTCATATTTCTTGTTCTGTTGTTGGTCTCCATTCACAAGAAATTCGTTGGAATATGATCAATTTGGGGTTTTATTTTCACTTACCGGGACGTTGGCTCCCAAGTGGATGGATTGTAAGATCCCACGTCGGTTGGAAAGGAGAACGAAACATTGCTTATAAGGGTGTGGAAATGCTTATAAGGGTGTGGAAACATCTCCCTACTTTGAGAGCTATTGCTCAAAGTGGACAATAGCATACCATTGTAGGGTTCGTGATTCCTAACATGGTATAGAGTTATGCTCATGTCAATATAGAATCCTCAAATGTTGAACAAAGAAGTTGTGAGCCTCGAAGGTATAGTCAAAAGTGACTCAAATGTCGAACAAAGGGTGTACTTTGTTTGAGGACTCCAGAGAAGGAGTCGATCCTCGACTAAGGGGAGGTTGTTCGAGGGCTCCATAGACCTCAGAGGAGACTATATAGTGTACTTTACTCGAGGGGAGGATTGTTGAGGATGGTTGGGAGGGAGTCCCACGTTGGCTAATTTAAAAAATGATCATGGGTTTATAAGAAAGGACTTGTATTAGAGCATATTATTTGTCTTAACCACCACGATTTTGTTTACTCGAGAAGGTTCGAGCCTCAAAGCTAGATAATATGAGGCCGGATTCTAAACTTCAAACTGTTCTGGCTATGTTGTAGCCTCGATATTGTCCTGAGAGGCCTTGTGAGAAATGCTGTATAGTCGTGTGTTTGTTGTATCAGATTATGATCGAGTTCATGTTGTTGGGAGAAAAGAACTTGATACTCTATAAGTCCCAAATCACACCTCTATTGGTAAAACTTCTGAGGACGATTTCTTTTCTCTTCTCATTTGGGTTCCTAATTTGTCTGTTGAGTTCAAATTTTTTCTTTGTGATTGCTTTTCTTGGATGCTACCCAGTTCTCTACAAACTATTATGTTTAGCAAGTGGATTGATCTTGTTCTTGGGAAGAAGTGGAATACCCTGATTTTTCATTCTTCTCCATGTGTGGATTGATCGGGAGAGAAAAATAAACGACTATCTTGTTTCGTCGCTTTCTACTTAAGAGCAATTGGCTCCCGGTGAGAACTGAAATCCTGGTTGGTGCAAATTGAGATCTTGAAGCTAAGGTTAAGGCCCTTCCTAAAGCAGGAACATAGTTTCTTGTTCAAATCCAAAGTCTTCAGTCTCCTCCCGAGTTAAGACTGTAGTTCCAATTCCAGAATCTTAGACAATTCAACTTAATATAGCATAGCGGATATAATTTGATTCAGCTTAAAAGAAGAAAGGGGCATCTTTCCCTTGACTTTTGGGTTGCGAGTGCATGCGTCCATCACGGTTAGAGCTTTCACAGGTACCTTGTACGTAGTTAAGGTGAAGCTTTGTTTGGTCTTGATTCTAGACTAGGCTGGAAATAAGCCCAGGACTGACCTAGCTCAAATTTGTTGTTGATCCGGGCAGAATCCATTCATCTTGCTATTCATACAATTACATACTAGAATCCATGTTTATCATATTTCTCTTCTAGAACTTTGTGAATTTATCTCGTTCTCGGGGTCGAAAATCACGAAACATACAGTCAATGTGGCCGTAAATGTTGAACTAGACATAGGAGGGAGTAGAAGAATGAAGGAAAAATGAAGCTAAATTTCTCTGTTTTGAAGTTTCCGAGTATAATGCATTGTGCATTATGATAATATGAACAAACTTTTCTTGCTTTTGGTACTTACAAGATGAATTCAATAATCTTGTTCTTACCTCAGGTACAACTAGCAAATCATAACCAATTGGGCGATCATTATGCCTCCAAACATCCAAAGGAAAAGCCACCATCAGAATCGAGCTGAATCGTCGCTTGCACGTTGAAGTATGTGTGTCACTACATATTGAAGGCATTTCAAAGTTCTCTTATGTTCAGATCAATGAAAGTTGCTGGTATTGTCTTCATATTTATTGTTCTTAAAATGTACTAGAAAGAATGATGATTTGTTCTGTCACTTGTAAAATAAACCGAACTCTAGCATGCTTATTCCACATTCCCAGTCTAATTTTCTCTGTGCCTTAGAAAATATGGAATCCTTGAAAGAAATGGCCTTGTTTCCAGCATAAAATGATACAAATGAATAGGCTAATCATCACAGAAG ATGACCCGAGGAAAGCAGAAGATCGAAGCTCAGAAACGAAATGCGGAGAAGAATCAGAAGCCCAAGGGCTCACAATTCGAGGCCAGAGCCGTTGCCCTTAAAGTTATCTGCCCTATTTGCAAGGTACAACTAGCAAATCATAACCAATTGGGCGATCATTATGCCTCCAAACATCCAAAGGAAAAGCCACCATCAGAATCGAGCTGAATCGTCGCTTGCACGTTGAAGTATGTGTGTCACTACATATTGAAGGCATTTCAAAGTTCTCTTATGTTCAGATCAATGAAAGTTGCTGGTATTGTCTTCATATTTATTGTTCTTAAAATGTACTAGAAAGAATGATGATTTGTTCTGTCACTTGTAAAATAAACCGAACTCTAGCATGCTTATTCCACATTCCCAGTCTAATTTTCTCTGTGCCTTAGAAAATATGGAATCCTTGAAAGAAATGGCCTTGTTTCCAGCATAAAATGATACAAATGAATAGGCTAATCATCACAGAAG ATGACCCGAGGAAAGCAGAAGATCGAAGCTCAGAAACGAAATGCGGAGAAGAATCAGAAGCCCAAGGGCTCACAATTCGAGGCCAGAGCCGTTGCCCTTAAAGTTATCTGCCCTATTTGCAAGGTACAACTAGCAAATCATAACCAATTGGGCGATCATTATGCCTCCAAACATCCAAAGGAAAAGCCACCATCAGAATCGAGCTGA MTRGKQKIEAQKRNAEKNQKPKGSQFEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPSESS Homology
BLAST of Carg13157 vs. NCBI nr
Match: KAG6600413.1 (hypothetical protein SDJN03_05646, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031072.1 hypothetical protein SDJN02_05111, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg13157 vs. NCBI nr
Match: KAG7015122.1 (hypothetical protein SDJN02_22755 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130.6 bits (327), Expect = 5.2e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Carg13157 vs. NCBI nr
Match: KAG6577120.1 (putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.6 bits (327), Expect = 5.2e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Carg13157 vs. NCBI nr
Match: EEF42492.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 129.8 bits (325), Expect = 8.9e-27 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Carg13157 vs. NCBI nr
Match: TYK16504.1 (zinc finger protein 706-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26 Identity = 64/67 (95.52%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy Swiss-Prot
Match: Q5ZMM5 (Zinc finger protein 706 OS=Gallus gallus OX=9031 GN=ZNF706 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 2.9e-04 Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy Swiss-Prot
Match: Q9Y5V0 (Zinc finger protein 706 OS=Homo sapiens OX=9606 GN=ZNF706 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 3.8e-04 Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy Swiss-Prot
Match: Q9D115 (Zinc finger protein 706 OS=Mus musculus OX=10090 GN=Znf706 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 3.8e-04 Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy TrEMBL
Match: B9S1M3 (C2H2-type domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0866530 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy TrEMBL
Match: A0A5D3CZW8 (Zinc finger protein 706-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003120 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26 Identity = 64/67 (95.52%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy TrEMBL
Match: D7TFG3 (C2H2-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_02s0087g00160 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25 Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy TrEMBL
Match: A0A6N2KTE0 (C2H2-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS125895 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.4e-25 Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of Carg13157 vs. ExPASy TrEMBL
Match: M0U697 (C2H2-type domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25 Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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