
Carg13126 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCATTTGCTTAGAAGGTAAACGTGTTGATATTTTTTGACAGTTTAAAAGTCTCTTATTTTCTTCAAATTAGATAGCTTTTGCCTAAAACCATAAACAACTCTGTTTTCCTCTCTTTATATATCATTTTTAGAGGTCTTATTGGGACAGAAAACAAATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTCTTTGCCCATCTTCTCCTGCAATTCCCATGTGAGAGACCCCGTTTTTCTTCAGCTTCTTCTTCTTGTTTTTTTGATAACTTTCATGGAAAGTGGATTTTGGGTTTTTGTTTATGGGTGTAGGATGGCCATGCCATTGAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTTCATCCTTATTTCTTTTTCACTCCAACTTTTGTTTTCATATGATTCCAAGATGAACTAAATTGGATACAATGTTTGCAGGTAAGAGCCATATTAGGGATAGCAAGCCAAGAGAGGAATAGCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATCTCTTCAGAGGTTCCTACAAAGGAGGAACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA ATGCCCATTTGCTTAGAAGAGGTCTTATTGGGACAGAAAACAAATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTCTTTGCCCATCTTCTCCTGCAATTCCCATGTGAGAGACCCCGTTTTTCTTCAGCTTCTTCTTCTTGTTTTTTTGATAACTTTCATGGAAAGTGGATTTTGGGTTTTTGTTTATGGGTGTAGGATGGCCATGCCATTGAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTAGGGATAGCAAGCCAAGAGAGGAATAGCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATCTCTTCAGAGGTTCCTACAAAGGAGGAACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA ATGCCCATTTGCTTAGAAGAGGTCTTATTGGGACAGAAAACAAATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTCTTTGCCCATCTTCTCCTGCAATTCCCATGTGAGAGACCCCGTTTTTCTTCAGCTTCTTCTTCTTGTTTTTTTGATAACTTTCATGGAAAGTGGATTTTGGGTTTTTGTTTATGGGTGTAGGATGGCCATGCCATTGAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTAGGGATAGCAAGCCAAGAGAGGAATAGCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATCTCTTCAGAGGTTCCTACAAAGGAGGAACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA MPICLEEVLLGQKTNEKRGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT Homology
BLAST of Carg13126 vs. NCBI nr
Match: KAG7031101.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Carg13126 vs. NCBI nr
Match: XP_022941937.1 (uncharacterized protein LOC111447151 [Cucurbita moschata] >XP_022941938.1 uncharacterized protein LOC111447151 [Cucurbita moschata]) HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg13126 vs. NCBI nr
Match: KAG6600453.1 (putative aquaporin NIP5-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187.6 bits (475), Expect = 9.1e-44 Identity = 110/167 (65.87%), Postives = 119/167 (71.26%), Query Frame = 0
BLAST of Carg13126 vs. NCBI nr
Match: XP_023526418.1 (uncharacterized protein LOC111789898 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of Carg13126 vs. NCBI nr
Match: XP_022988981.1 (uncharacterized protein LOC111486178 [Cucurbita maxima]) HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41 Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06 Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy TrEMBL
Match: A0A6J1FNU6 (uncharacterized protein LOC111447151 OS=Cucurbita moschata OX=3662 GN=LOC111447151 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 5.2e-45 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy TrEMBL
Match: A0A6J1JIQ6 (uncharacterized protein LOC111486178 OS=Cucurbita maxima OX=3661 GN=LOC111486178 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy TrEMBL
Match: A0A6J1C4G2 (uncharacterized protein LOC111008192 OS=Momordica charantia OX=3673 GN=LOC111008192 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy TrEMBL
Match: A0A6J1J887 (uncharacterized protein LOC111482635 OS=Cucurbita maxima OX=3661 GN=LOC111482635 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22 Identity = 71/117 (60.68%), Postives = 79/117 (67.52%), Query Frame = 0
BLAST of Carg13126 vs. ExPASy TrEMBL
Match: A0A6J1ET94 (uncharacterized protein LOC111437514 OS=Cucurbita moschata OX=3662 GN=LOC111437514 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 6.2e-22 Identity = 67/99 (67.68%), Postives = 76/99 (76.77%), Query Frame = 0
BLAST of Carg13126 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07 Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Carg13126 vs. TAIR 10
Match: AT2G34600.1 (jasmonate-zim-domain protein 7 ) HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04 Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = 0
BLAST of Carg13126 vs. TAIR 10
Match: AT3G22275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 7.5e-04 Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|