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Carg13094 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACCTCTCTCGACTTCATCCACTTGTTCCCCAAGGAACCTGATTCCCTCTTATTCCTTTTTCCATCTCTGCTCAAGACGCTTTTCTTTTTCAAATTCGGAAGAGTGTGTTTCAGAGCTTGAAGAAACTCATTGATTCTCTGAACCCAGGTGAGAAGGGAAGTCTTTTTTGGGGTTTTTCGAGTGGGTTTTAGTGATCATGAGTGGGTTTTAGAGGATTCGAGAGAAGGTTAGGATGAAGATTCAGTGCAATGTCTGCGAAATGGCTGAAGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCCTGCGATGAGAACATTCATGCCGCCAACAAGCTCGCTAGCAAGCACCAGAGAGTTCCTCTCTCTGGTTCTTCGTCTCAGATGCCCAGATGCGACATCTGCCAGGTATGAGTTATATAAATCAATCACTCTGTTAGTTCCAGTAATCGAGACAAATGAGTCCGGAGATGTGGTAATGAATTGGTTGGAATCAACACTAATATGAGGACTAAAGCTTCTTTAGATCATGTTACTACGAACTGAGTTCGTAGGCTTAAGTAGTAGGATTACATATCCACCCCACGATGAATGATCAAGGAGTAATTGAATCTGTTGCCAAATCTCATGAGTCTCTTCATATTTTTGTTTCAAAATTCTTCTAGATATTTATTTCCAGATCTTATAGGCTGACGGTAATCCTACTAACAAAGGAAAGAAAAGTTGGTTTCAGCTCGAGATCAAGCTGTGGTTTTAGAGGTTTGAAATGCTAGTAACTTTTCTTTGTGAGATACTACGAGAGGGGAATGAAGCCTTTCTTTTAGGGTGTGGAAACCTTTATCTAGTAGACACATTTTAAAATTATGAGGCTGATACGGATATGTAACGGACCAAAGTGGACAATATCTACTAGCGGTGGACTTAGGCTCTTACAAATGGTATAAGAGCCAAACAACCCTGGTGTGTCAGTGAGGACGCTAGCCCCTAAGGGGGATGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAGCATTCTTCATAAGGGTGTGGAAACCTCTCCCTAGGAGACGCTTTTTAAAACCGTAAGGCTGAGGGAGATACGTAATGGGCCAAAACGGACAATATCTGCTAGCGGTAGACTTGGACTGTTACAATAATATTTGAGGCCAGTGACTATTTGGGGGGAAGTCTAAACCAAGATATGGATTGATGGCATTTGAATTTGTTATATGTTCTTAGGGGAATGTCAGCCAGTAGCTAACTTCATTTCTTTTCTGAAGCCCCTTTATCAGTTGTTATTGTTACCCTTTGTAAGTCGTCCATGATTTCTTGCAGGAAGCTAGTGGCTACATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCAATACACACAGCAAATGCTTACGTAACGGGTCATCAACGCTTTCTGCTCACTGGTGTGAAAGTCGCACTCGAGCCAACCGACCCCGTTCCTTGTTCTTCCATAGCTAATTCACATTCTAGAGAGATATCAACCAAGACAAAAGTTAGACCACCGTCTGATAAGGAATTCTCGATGCCTTCGTCTGGTGAACTCAGCAGAAGCCTGTCTGTTCAAGGTGGATCTGATGACTTAATGACAAATAGAACATTGCTTACTGGAGATTCTGCTTCTGGTGGCTTTTCACAATGGCAAATAGATGAACTCATTAATCTGACTGGATTCAATCAGAATTATGGGTTTATGGATAACGGATCATCCAAGGTATGATTATGGTTTTATAATGCAGTGAATTCTGATCAACTTGTAGTAACATGCTGGATGAACTCTTGATTATATTTATATGGAATCCCAACCATGTGAATTGTTTGCCATTGCAGAATATTCACCATTCTTAGTGGTTGATAATGGCTTCTGGAATTTAAAAATCCTTCTATTAGGATGTCACTCACATATCAAAACCTCTTTATAAACAACCATCTTATGTAGCTTGGATGCTTTTCTGCATATATACACTATACAACCTTCAAGATTGATAGGGACTGGAGAGAGACAGAACTAATTCTTAGGCACGATACGCTGGTAAACTATCGTTTCCAGAGTGCTGGTTCTTGTGTAGGACTATTCTAAATAAGTAATTTTTTCTTGACCTCTAAGTTGGGACATTGGTAGATTGTTACAGGTCATGGGCGAGTTCTTGCATGTTATGATATTATCCTATCCTCATAGATTAACTGCAAAAAAGTGGACTGATTGGAGGTAATATGCCGTGCAGATTGCACATATTACTGCCAATCCAGATGTAATAACTTTTTGCTTTTCTTTATCTGTGAAATCTATCAGGCTGATAGTGGAAAGCTTGGGGACTCCGACTCATCACCAAGTTTGAGAGCTGCTGATGTTGAACTCGACGATGACGATGAATGCTCGGGTCACATTCCAGAGGCTTCCTGGACTGTGCCTCAGGTTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCCGCTCTTCAGAAAGGTTTCAACATTGCTCACGCAACGGTATGTTCTCGAAACGAAGGAGGCAGTTTTAGATGTCTGAACACTGGCATCGGGCTTCATTGCTTGTGTTCTGAACGTCTGCTCGGTTTGTTGTGTGTTTATAGGCTTTCTCAACTACATTTGTTTTATAATAAGTGGACACGACCAAAGATTATCGCTTGAAATGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACAATGATGTAGAAATAAACCTGTGTATTAGTTGACCTAGGTATTTTTTCAGATTTATTTCGAACATCATATGGAAATGATTAGGATTCAAATCATGTTGACCCACTTGATTATTTGTAGTTTTACAAAAATTATGAAGAATCAATGTTATGTCTTGGCCATTTTGAGTTCTGTAGCTCATTTTCATTGTTCATTGTTCAATGTTATTAACCTCTTTCCTAGTATAACCTTCACTTTTTCCT TAAACCTCTCTCGACTTCATCCACTTGTTCCCCAAGGAACCTGATTCCCTCTTATTCCTTTTTCCATCTCTGCTCAAGACGCTTTTCTTTTTCAAATTCGGAAGAGTGTGTTTCAGAGCTTGAAGAAACTCATTGATTCTCTGAACCCAGGTGAGAAGGGAAGTCTTTTTTGGGGTTTTTCGAGTGGGTTTTAGTGATCATGAGTGGGTTTTAGAGGATTCGAGAGAAGGTTAGGATGAAGATTCAGTGCAATGTCTGCGAAATGGCTGAAGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCCTGCGATGAGAACATTCATGCCGCCAACAAGCTCGCTAGCAAGCACCAGAGAGTTCCTCTCTCTGGTTCTTCGTCTCAGATGCCCAGATGCGACATCTGCCAGGAAGCTAGTGGCTACATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCAATACACACAGCAAATGCTTACGTAACGGGTCATCAACGCTTTCTGCTCACTGGTGTGAAAGTCGCACTCGAGCCAACCGACCCCGTTCCTTGTTCTTCCATAGCTAATTCACATTCTAGAGAGATATCAACCAAGACAAAAGTTAGACCACCGTCTGATAAGGAATTCTCGATGCCTTCGTCTGGTGAACTCAGCAGAAGCCTGTCTGTTCAAGGTGGATCTGATGACTTAATGACAAATAGAACATTGCTTACTGGAGATTCTGCTTCTGGTGGCTTTTCACAATGGCAAATAGATGAACTCATTAATCTGACTGGATTCAATCAGAATTATGGGTTTATGGATAACGGATCATCCAAGGCTGATAGTGGAAAGCTTGGGGACTCCGACTCATCACCAAGTTTGAGAGCTGCTGATGTTGAACTCGACGATGACGATGAATGCTCGGGTCACATTCCAGAGGCTTCCTGGACTGTGCCTCAGGTTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCCGCTCTTCAGAAAGGTTTCAACATTGCTCACGCAACGGTATGTTCTCGAAACGAAGGAGGCAGTTTTAGATGTCTGAACACTGGCATCGGGCTTCATTGCTTGTGTTCTGAACGTCTGCTCGGTTTGTTGTGTGTTTATAGGCTTTCTCAACTACATTTGTTTTATAATAAGTGGACACGACCAAAGATTATCGCTTGAAATGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACAATGATGTAGAAATAAACCTGTGTATTAGTTGACCTAGGTATTTTTTCAGATTTATTTCGAACATCATATGGAAATGATTAGGATTCAAATCATGTTGACCCACTTGATTATTTGTAGTTTTACAAAAATTATGAAGAATCAATGTTATGTCTTGGCCATTTTGAGTTCTGTAGCTCATTTTCATTGTTCATTGTTCAATGTTATTAACCTCTTTCCTAGTATAACCTTCACTTTTTCCT ATGAAGATTCAGTGCAATGTCTGCGAAATGGCTGAAGCCACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCCTGCGATGAGAACATTCATGCCGCCAACAAGCTCGCTAGCAAGCACCAGAGAGTTCCTCTCTCTGGTTCTTCGTCTCAGATGCCCAGATGCGACATCTGCCAGGAAGCTAGTGGCTACATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCAATACACACAGCAAATGCTTACGTAACGGGTCATCAACGCTTTCTGCTCACTGGTGTGAAAGTCGCACTCGAGCCAACCGACCCCGTTCCTTGTTCTTCCATAGCTAATTCACATTCTAGAGAGATATCAACCAAGACAAAAGTTAGACCACCGTCTGATAAGGAATTCTCGATGCCTTCGTCTGGTGAACTCAGCAGAAGCCTGTCTGTTCAAGGTGGATCTGATGACTTAATGACAAATAGAACATTGCTTACTGGAGATTCTGCTTCTGGTGGCTTTTCACAATGGCAAATAGATGAACTCATTAATCTGACTGGATTCAATCAGAATTATGGGTTTATGGATAACGGATCATCCAAGGCTGATAGTGGAAAGCTTGGGGACTCCGACTCATCACCAAGTTTGAGAGCTGCTGATGTTGAACTCGACGATGACGATGAATGCTCGGGTCACATTCCAGAGGCTTCCTGGACTGTGCCTCAGGTTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCCGCTCTTCAGAAAGGTTTCAACATTGCTCACGCAACGGTATGTTCTCGAAACGAAGGAGGCAGTTTTAG MKIQCNVCEMAEATVLCCADEAALCWACDENIHAANKLASKHQRVPLSGSSSQMPRCDICQEASGYIFCLEDRALLCRKCDVAIHTANAYVTGHQRFLLTGVKVALEPTDPVPCSSIANSHSREISTKTKVRPPSDKEFSMPSSGELSRSLSVQGGSDDLMTNRTLLTGDSASGGFSQWQIDELINLTGFNQNYGFMDNGSSKADSGKLGDSDSSPSLRAADVELDDDDECSGHIPEASWTVPQVPSPPTASGLYWPRSYHNSMDGAVFVPDIRSSERFQHCSRNGMFSKRRRQF Homology
BLAST of Carg13094 vs. NCBI nr
Match: KAG6600492.1 (B-box zinc finger protein 22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031133.1 B-box zinc finger protein 22 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 598.2 bits (1541), Expect = 3.8e-167 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Carg13094 vs. NCBI nr
Match: XP_022982138.1 (B-box zinc finger protein 22-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 578.2 bits (1489), Expect = 4.1e-161 Identity = 286/295 (96.95%), Postives = 288/295 (97.63%), Query Frame = 0
BLAST of Carg13094 vs. NCBI nr
Match: XP_023538532.1 (B-box zinc finger protein 22 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 575.9 bits (1483), Expect = 2.0e-160 Identity = 284/295 (96.27%), Postives = 286/295 (96.95%), Query Frame = 0
BLAST of Carg13094 vs. NCBI nr
Match: XP_022942909.1 (B-box zinc finger protein 22-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 563.5 bits (1451), Expect = 1.0e-156 Identity = 281/290 (96.90%), Postives = 282/290 (97.24%), Query Frame = 0
BLAST of Carg13094 vs. NCBI nr
Match: KAA0059060.1 (B-box zinc finger protein 22 [Cucumis melo var. makuwa]) HSP 1 Score: 540.4 bits (1391), Expect = 9.5e-150 Identity = 266/297 (89.56%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 300.4 bits (768), Expect = 2.2e-80 Identity = 163/304 (53.62%), Postives = 207/304 (68.09%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.6e-38 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 149.4 bits (376), Expect = 6.2e-35 Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 8.4e-32 Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30 Identity = 76/154 (49.35%), Postives = 94/154 (61.04%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy TrEMBL
Match: A0A6J1J432 (B-box zinc finger protein 22-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481061 PE=4 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 2.0e-161 Identity = 286/295 (96.95%), Postives = 288/295 (97.63%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy TrEMBL
Match: A0A6J1FSQ2 (B-box zinc finger protein 22-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447797 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 5.1e-157 Identity = 281/290 (96.90%), Postives = 282/290 (97.24%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy TrEMBL
Match: A0A5A7UVE3 (B-box zinc finger protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00870 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 4.6e-150 Identity = 266/297 (89.56%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy TrEMBL
Match: A0A5D3D1E3 (B-box zinc finger protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00380 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 6.0e-150 Identity = 266/297 (89.56%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Carg13094 vs. ExPASy TrEMBL
Match: A0A1S3BS88 (B-box zinc finger protein 22 OS=Cucumis melo OX=3656 GN=LOC103492938 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 6.0e-150 Identity = 266/297 (89.56%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Carg13094 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 300.4 bits (768), Expect = 1.5e-81 Identity = 163/304 (53.62%), Postives = 207/304 (68.09%), Query Frame = 0
BLAST of Carg13094 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 ) HSP 1 Score: 288.9 bits (738), Expect = 4.7e-78 Identity = 161/324 (49.69%), Postives = 205/324 (63.27%), Query Frame = 0
BLAST of Carg13094 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 159.8 bits (403), Expect = 3.3e-39 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Carg13094 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein ) HSP 1 Score: 159.8 bits (403), Expect = 3.3e-39 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Carg13094 vs. TAIR 10
Match: AT2G31380.1 (salt tolerance homologue ) HSP 1 Score: 149.4 bits (376), Expect = 4.4e-36 Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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