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Carg13086 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGCCAATCCGACGATTCCGAGCGTTCAACTGGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGCCAATCCGACGATTCCGAGCGTTCAACTGGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGCCAATCCGACGATTCCGAGCGTTCAACTGGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL Homology
BLAST of Carg13086 vs. NCBI nr
Match: KAG7031141.1 (hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.4 bits (542), Expect = 9.6e-52 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Carg13086 vs. NCBI nr
Match: XP_022983484.1 (uncharacterized protein LOC111482071 [Cucurbita maxima]) HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Carg13086 vs. NCBI nr
Match: KAG6600501.1 (hypothetical protein SDJN03_05734, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Carg13086 vs. NCBI nr
Match: XP_022942868.1 (uncharacterized protein LOC111447770 [Cucurbita moschata]) HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47 Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Carg13086 vs. NCBI nr
Match: XP_023516499.1 (uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.8 bits (499), Expect = 9.3e-47 Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0
BLAST of Carg13086 vs. ExPASy TrEMBL
Match: A0A6J1J7J0 (uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.9e-48 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Carg13086 vs. ExPASy TrEMBL
Match: A0A6J1FVV1 (uncharacterized protein LOC111447770 OS=Cucurbita moschata OX=3662 GN=LOC111447770 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47 Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Carg13086 vs. ExPASy TrEMBL
Match: A0A6J1CMP9 (uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012878 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.2e-38 Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of Carg13086 vs. ExPASy TrEMBL
Match: A0A6J1EYJ9 (uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC111437603 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 7.4e-34 Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of Carg13086 vs. ExPASy TrEMBL
Match: A0A0A0KVF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082960 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.7e-33 Identity = 74/102 (72.55%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of Carg13086 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 7.2e-05 Identity = 24/51 (47.06%), Postives = 28/51 (54.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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