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Carg13078 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCAAATAATTAATGTTATTTGCATATTTCCTTACCAACCATACTCTTTCTTGAAGATAAGAATATGCTTGAAATTTGAAAGTTTTAAGGTTGAGTTTCTAAAATCGATGTGAGTTTAGGGTTTTGCTTTTTAGATCAAAAGTTTGTTATAGATCAATGAGTTTATTTATTTATTTATTTATTGGATTGTATTGTCGAGTTTTTTTTATTTATTTATTATTTTCTATTACCTTATGTTGATGCGTGAATCTAATCGATAGGACTCGAGGTGGTGAGCCAACGTCTCAAATCTTAATATAGGTTTGATTGTGTCATGCACAAAGATGACCTAGTATTAGTAGTGCTATTCCTAATACCCTTTTATGCATACTCAATGACGTTCTTGAGTTGAATTTAGGATATGTTGCGTGTCTTTTGTGGAAGTTTGCTTTCCAACGTGAATCTTTTCGTTCTTGGTAGTCAACACGCTCCTTGACTCAACTTCTAAACCTTGAGGAGAGTGTTTTACCTCTTTAAGTAGTTTGGGCCCTTCGAGCCTCTCCGTTTGCTTTGGGTGCTACGCTTGTGTATATGCACTTGAATCGAGTAGAACAATGTTAACTCTATTTTCTATTGTATTTTAATTTAATTGAGGAGCTTCTAATTATGGGGATATGTTTGAACAAAATTTGGTATTAAATGAAAATTAAGATTAAAAAAAAACCCTAAATATGATTTTTTTTTTTTTTTTTAGTGTAATTTTTCCTATTTTATTTTATACTTAGTTGAAAACCGTTATCTTCCCGCCAAATTCAAACACAATCTCTCTCTAATTGCCCTAATCTTCATCCTCATTTCGATCATTGTTCTTCAATCAACATCTCTGCTAAACCCTAAAGATTACAATCCTTTGGCGCCGAGCTCTAATGGCTTCACAATCTCTCCAAATTCATCTTTTCCGATTTCCCCCGCCTCTCCGCCTCCGTCGAATTCTCTAGTCCCCGCCCTTTTCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCTTCGCTCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA ATGGACCAAATAATTAATTGTAATTTTTCCTATTTTATTTTATACTTAGTTGAAAACCGTTATCTTCCCGCCAAATTCAAACACAATCTCTCTCTAATTGCCCTAATCTTCATCCTCATTTCGATCATTGTTCTTCAATCAACATCTCTGCTAAACCCTAAAGATTACAATCCTTTGGCGCCGAGCTCTAATGGCTTCACAATCTCTCCAAATTCATCTTTTCCGATTTCCCCCGCCTCTCCGCCTCCGTCGAATTCTCTAGTCCCCGCCCTTTTCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCTTCGCTCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA ATGGACCAAATAATTAATTGTAATTTTTCCTATTTTATTTTATACTTAGTTGAAAACCGTTATCTTCCCGCCAAATTCAAACACAATCTCTCTCTAATTGCCCTAATCTTCATCCTCATTTCGATCATTGTTCTTCAATCAACATCTCTGCTAAACCCTAAAGATTACAATCCTTTGGCGCCGAGCTCTAATGGCTTCACAATCTCTCCAAATTCATCTTTTCCGATTTCCCCCGCCTCTCCGCCTCCGTCGAATTCTCTAGTCCCCGCCCTTTTCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCTTCGCTCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA MDQIINCNFSYFILYLVENRYLPAKFKHNLSLIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFDWKVL Homology
BLAST of Carg13078 vs. NCBI nr
Match: KAG7031149.1 (hypothetical protein SDJN02_05188, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 256.1 bits (653), Expect = 1.5e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg13078 vs. NCBI nr
Match: XP_038904573.1 (GDSL esterase/lipase At1g71691 [Benincasa hispida]) HSP 1 Score: 138.7 bits (348), Expect = 3.6e-29 Identity = 74/93 (79.57%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Carg13078 vs. NCBI nr
Match: XP_023552224.1 (GDSL esterase/lipase At1g71691 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Carg13078 vs. NCBI nr
Match: XP_022931385.1 (GDSL esterase/lipase At1g71691 [Cucurbita moschata] >KAG7015133.1 GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Carg13078 vs. NCBI nr
Match: XP_022985405.1 (GDSL esterase/lipase At1g71691 [Cucurbita maxima]) HSP 1 Score: 134.8 bits (338), Expect = 5.2e-28 Identity = 71/92 (77.17%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy Swiss-Prot
Match: Q9FVV1 (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana OX=3702 GN=At1g71250 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy Swiss-Prot
Match: Q9SF78 (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana OX=3702 GN=At1g71691 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy Swiss-Prot
Match: Q67ZI9 (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana OX=3702 GN=At2g42990 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04 Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy Swiss-Prot
Match: Q9LZC5 (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana OX=3702 GN=At5g03820 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04 Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy Swiss-Prot
Match: Q8LFJ9 (GDSL esterase/lipase 7 OS=Arabidopsis thaliana OX=3702 GN=GLIP7 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 21/36 (58.33%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy TrEMBL
Match: A0A6J1EZA3 (GDSL esterase/lipase At1g71691 OS=Cucurbita moschata OX=3662 GN=LOC111437583 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy TrEMBL
Match: A0A6J1JB87 (GDSL esterase/lipase At1g71691 OS=Cucurbita maxima OX=3661 GN=LOC111483416 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28 Identity = 71/92 (77.17%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy TrEMBL
Match: A0A6J1C4U4 (GDSL esterase/lipase At1g71691 OS=Momordica charantia OX=3673 GN=LOC111008376 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26 Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of Carg13078 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22 Identity = 70/97 (72.16%), Postives = 75/97 (77.32%), Query Frame = 0
BLAST of Carg13078 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 5.2e-10 Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Carg13078 vs. TAIR 10
Match: AT1G71250.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of Carg13078 vs. TAIR 10
Match: AT1G71691.2 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of Carg13078 vs. TAIR 10
Match: AT2G42990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06 Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 0
BLAST of Carg13078 vs. TAIR 10
Match: AT5G03820.1 (GDSL-like Lipase/Acylhydrolase family protein ) HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06 Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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