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Carg13073 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATAAACCCCTCTTTCTCTCTCCCCTTTCACTTCACACCAACCTCCACTCTCTCCGCTCAAATTTCCCTCTTCACTTCTTCTCTATCAATATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGAACCTCTCGCTCTTATTCCGCTGGTAATATCGTTTGTATTTTGATTCATCTTTGTTTTTTTTGTTTTTTTTATTATTGTCTTGTTTCTGATCTGGTTTTTGTTTGTTCATTTGCAAAATATTACACCTGAAATGGATGGATCCAAGATTAATACTGTTACATAAAAATATATTTGAGCTAGTTTTTGTTTTAGGAAGTACTATTTGCTTTTGGATTTCACTTTCGGTTTTCTTTTTTGTCTGTAATAAACTTTTAGAAATTAAGGAAAGATGAAAAAAGATTTAGGAATTTCTCATTAACTTGAAAATGTTTTGTATATAAATGGGTGATCTGTTGAGCAAATAATTGCGAAACAGAAATTTAACAAAGTACAACTGAATATTTACGAAAGTAACTGAATTACAGATAAAGGTAAGAGCAGCTCAGTGAGATGCATTGACAGTCTCTGTGCTGTATAGACGGTGATTGTGAGCGAGTTACTATGGAGAATTGAAATTGGGAGATTGTAGCTTCGTGTTTCAATGTCGGTTTTGTTTATGTTACAATGTTGGAGATAGTTTGCTCTGACGCGGGATCTATTGGTTCATTTTGTCTTGTATTTTCAACCTGAAATTCCTGAATCTCTGTTTTATGACTGTTTTATCGGTTTTTCCGAGTCGATTTCGGTTTTTGGGAAGCGCGATTTGCTTTGTATTTCAATGTCGCTTTTTGTTTGATTCTATGCGTATTAGACCGACTAATTGAAATGAGAAATTTTAGCTTCGTATTTCGATGTCGATTTTGTTTATGTGCCTGCCTTGTGGACTGAATGTGAATTACTCCAATTTATCGAAATGAAAACTAACTGTAGTTTGTGTTGACTCAATGGCAGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGGTTCAGTCGACATAACTCTTATAATATACTTGTCTTGATTCTGTGAAAAATGCTATAAATTTCTTCCATTAGATGGGGTAGAATTAGATTTCTGGATCCGACATACCTATTCAGGATAGAACGATGAAAGGAGGGGCTCCTTCTCTGTAATGAAACTATTATGTTAAACTTTTTGCCATCTACTTATCATATTTAATACGTCGTCTTTTACATCAAAAATTAAATTTTAGAAGAAATAAAATCCGACTTCCTTCAAAGTTCATCAGAATAAAAATGGCTAATGTTGGTGTAAGTAATTGTACAGCGATGTAAAGATGGGGACGGTGCCAACCCTTTTTCTTTTCCTCCGTCCTAACATATGATTATCTTTTTTCTTTTAATGTAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGGTAATATACTAAACATGATTTCTTTGTTCACGTTTACCTCATCCTTAATGAATAGTTAGTGATCATTATTACACTACACTTACGAGCTTTCTCATAACTTCTCGCAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGGTAAGACTATACTATCCTTGCGACGTTTTTCTTAATGCCAATTCTGATTTGATATTTGACAGCTCTATTTTATTACACTTACATCTGGTATTGGTATACAAGATTTCTGTTATTCCTCAGTGGTCTATTCCAGCCCTTAAAAGGATAAGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAAAAGCTTCTTTTACTCTGTATTGATTTTTACTTTTTGCCTGATTGGGAAGGGTGTTCGTATATTTATCTGATCCAATACTTGTACTATGTAACAGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTCAGTAAGAACCGGAAATTTCTCTGTGTGTAACTGGAACTGCTTTTGAGCTTGGATGAACCTTAAGTTTTTTAATTCTACAGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGCAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGTAATGCCTTATTACTTACTCCATAGTCATTTGGTGAAGATAGTTAGAACACATATTTAAGGAAATGAAACAGAGCATGAGAATCACTCTCTACACCAACTTCCCCAATTACTTCAGCATAACTCATTTCTCCAATTTGAACATCTCACTCCAAAATCTAAATATTAGAAGACGTCGTGTTGCTTTAAAAATCAAGATTATCATTCGTGCTTTTCATCATTCATGGGGATTCTCATTTCAAACATTGAAATATATCAAAATTTAATCGATTGAAAAACATTTTCAGTTCCGAAACTTCATGGAAAGTAATAATTCAATCTTTAAACTTTAGTTTGTACCACTTCCGTCTATTTTATTCACTTAACGTTAATATATAATAACCATGTTTATTCTTCATATCCTATAAACCAATGAACCAAAGACCATATATGTCATAGAAGACGACTGGCCAATGATTCCTATTGGTCAACCTATATCTTAGTTTACTTGTGAATGAATTTTGAATAATGATAAAACAGGATTTAGAAGTGTTCTTGGCTTCCAAAATCCCTCCTTAAACTTGTTTGATTGTAATACATACAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTCTTTTTTGTTAAACTTCTTTCTGCTTTAACTGGAGGTAGACAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCATCCATAGTGCGAAAAACAAACAGTTTTTGAGAGTCTTACTTATGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTACAACTTTCTCTTTCCATTTTCTTTTGTACTCATATTATAGTAGGGGGAGAAGTTCATGAAGACTTCGCCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTAAGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTATAGGAAATGAGAAGCACTAAATGAAAAGTCAATTAAGTCATATCAAGTTTTGAACTCAAATGCGAGAGGATTAGTTTTTTTCCTCTCTCTAAGCAGATGCCGTTTGTGTCAACGTGTTCTGATCAACTATAAGAGTTACTTTTTAAATTTATACTTATTTTTAAAATGATTTTAATATCTGAAATTTAAC ATATAAACCCCTCTTTCTCTCTCCCCTTTCACTTCACACCAACCTCCACTCTCTCCGCTCAAATTTCCCTCTTCACTTCTTCTCTATCAATATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGAACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGCAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTCTTTTTTGTTAAACTTCTTTCTGCTTTAACTGGAGGTAGACAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCATCCATAGTGCGAAAAACAAACAGTTTTTGAGAGTCTTACTTATGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTACAACTTTCTCTTTCCATTTTCTTTTGTACTCATATTATAGTAGGGGGAGAAGTTCATGAAGACTTCGCCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTAAGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTATAGGAAATGAGAAGCACTAAATGAAAAGTCAATTAAGTCATATCAAGTTTTGAACTCAAATGCGAGAGGATTAGTTTTTTTCCTCTCTCTAAGCAGATGCCGTTTGTGTCAACGTGTTCTGATCAACTATAAGAGTTACTTTTTAAATTTATACTTATTTTTAAAATGATTTTAATATCTGAAATTTAAC ATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGAACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGCAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGA MSSNICRSASRAARSILAASRTSRSYSAGGRVVGSAAAVTLREKSSSLASIYENAGSAYASRGWISGLLALPAAAYMLQEQEAHAAEFERTFIAIKPDGVQRGLIAEIISRFERKGFKLVGIKVIIPSKEFAQRHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAVDEIKLWFKPEELVSYTSNSEKWVYGD Homology
BLAST of Carg13073 vs. NCBI nr
Match: XP_022941748.1 (nucleoside diphosphate kinase 3-like [Cucurbita moschata] >XP_023514764.1 nucleoside diphosphate kinase 3-like [Cucurbita pepo subsp. pepo] >KAG7031153.1 Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462.2 bits (1188), Expect = 2.6e-126 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Carg13073 vs. NCBI nr
Match: XP_022982529.1 (nucleoside diphosphate kinase 3-like [Cucurbita maxima]) HSP 1 Score: 454.9 bits (1169), Expect = 4.2e-124 Identity = 232/237 (97.89%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Carg13073 vs. NCBI nr
Match: XP_022136350.1 (nucleoside diphosphate kinase 3-like [Momordica charantia]) HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117 Identity = 217/237 (91.56%), Postives = 228/237 (96.20%), Query Frame = 0
BLAST of Carg13073 vs. NCBI nr
Match: KAG6600514.1 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 430.6 bits (1106), Expect = 8.5e-117 Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of Carg13073 vs. NCBI nr
Match: XP_038896214.1 (nucleoside diphosphate kinase 3-like [Benincasa hispida]) HSP 1 Score: 427.2 bits (1097), Expect = 9.4e-116 Identity = 214/237 (90.30%), Postives = 226/237 (95.36%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy Swiss-Prot
Match: O49203 (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDPK3 PE=1 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 5.2e-101 Identity = 186/238 (78.15%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy Swiss-Prot
Match: Q8LAH8 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDK4 PE=1 SV=2) HSP 1 Score: 366.3 bits (939), Expect = 2.6e-100 Identity = 182/236 (77.12%), Postives = 208/236 (88.14%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy Swiss-Prot
Match: Q8RXA8 (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea OX=3562 GN=NDK4 PE=1 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 6.6e-96 Identity = 179/238 (75.21%), Postives = 206/238 (86.55%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy Swiss-Prot
Match: P81766 (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.3e-72 Identity = 125/152 (82.24%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy Swiss-Prot
Match: Q46I11 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=ndk PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55 Identity = 100/145 (68.97%), Postives = 120/145 (82.76%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy TrEMBL
Match: A0A6J1FSZ4 (Nucleoside diphosphate kinase OS=Cucurbita moschata OX=3662 GN=LOC111447020 PE=3 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy TrEMBL
Match: A0A6J1J4U3 (Nucleoside diphosphate kinase OS=Cucurbita maxima OX=3661 GN=LOC111481322 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124 Identity = 232/237 (97.89%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy TrEMBL
Match: A0A6J1C3N0 (Nucleoside diphosphate kinase OS=Momordica charantia OX=3673 GN=LOC111008082 PE=3 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.9e-118 Identity = 217/237 (91.56%), Postives = 228/237 (96.20%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy TrEMBL
Match: A0A0A0KX20 (Nucleoside diphosphate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G052590 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-113 Identity = 211/237 (89.03%), Postives = 221/237 (93.25%), Query Frame = 0
BLAST of Carg13073 vs. ExPASy TrEMBL
Match: A0A5A7TUH9 (Nucleoside diphosphate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003920 PE=3 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112 Identity = 207/237 (87.34%), Postives = 220/237 (92.83%), Query Frame = 0
BLAST of Carg13073 vs. TAIR 10
Match: AT4G11010.1 (nucleoside diphosphate kinase 3 ) HSP 1 Score: 368.6 bits (945), Expect = 3.7e-102 Identity = 186/238 (78.15%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of Carg13073 vs. TAIR 10
Match: AT4G23900.1 (Nucleoside diphosphate kinase family protein ) HSP 1 Score: 366.3 bits (939), Expect = 1.8e-101 Identity = 182/236 (77.12%), Postives = 208/236 (88.14%), Query Frame = 0
BLAST of Carg13073 vs. TAIR 10
Match: AT4G23895.3 (Pleckstrin homology (PH) domain-containing protein ) HSP 1 Score: 357.5 bits (916), Expect = 8.6e-99 Identity = 177/230 (76.96%), Postives = 203/230 (88.26%), Query Frame = 0
BLAST of Carg13073 vs. TAIR 10
Match: AT4G09320.1 (Nucleoside diphosphate kinase family protein ) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48 Identity = 86/147 (58.50%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of Carg13073 vs. TAIR 10
Match: AT5G63310.1 (nucleoside diphosphate kinase 2 ) HSP 1 Score: 189.1 bits (479), Expect = 4.0e-48 Identity = 86/152 (56.58%), Postives = 107/152 (70.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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