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Carg13070 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCTCGATCGGATGGAGTCACTTTCTTCGTAA ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCTCGATCGGATGGAGTCACTTTCTTCGTAA ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCTCGATCGGATGGAGTCACTTTCTTCGTAA MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRMESLSS Homology
BLAST of Carg13070 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Carg13070 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197.2 bits (500), Expect = 7.0e-47 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Carg13070 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata]) HSP 1 Score: 177.6 bits (449), Expect = 5.7e-41 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of Carg13070 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38 Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of Carg13070 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 3.5e-22 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of Carg13070 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of Carg13070 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of Carg13070 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14 Identity = 56/112 (50.00%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Carg13070 vs. ExPASy TrEMBL
Match: A0A5E4GAQ3 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.4e-14 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of Carg13070 vs. ExPASy TrEMBL
Match: A0A6P5TQH7 (uncharacterized protein LOC110769682 OS=Prunus avium OX=42229 GN=LOC110769682 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.4e-14 Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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