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Carg13059 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCATAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCATAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCATAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSAIASRTLSMPHLSDRPTPPPPPPPRSCVPMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVGSLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI Homology
BLAST of Carg13059 vs. NCBI nr
Match: KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg13059 vs. NCBI nr
Match: KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg13059 vs. NCBI nr
Match: XP_023544229.1 (uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83 Identity = 160/162 (98.77%), Postives = 160/162 (98.77%), Query Frame = 0
BLAST of Carg13059 vs. NCBI nr
Match: XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata]) HSP 1 Score: 311.2 bits (796), Expect = 5.2e-81 Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Carg13059 vs. NCBI nr
Match: XP_022989197.1 (uncharacterized protein LOC111486340 [Cucurbita maxima]) HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77 Identity = 153/162 (94.44%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Carg13059 vs. ExPASy TrEMBL
Match: A0A6J1FQ62 (uncharacterized protein LOC111447227 OS=Cucurbita moschata OX=3662 GN=LOC111447227 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81 Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Carg13059 vs. ExPASy TrEMBL
Match: A0A6J1JF52 (uncharacterized protein LOC111486340 OS=Cucurbita maxima OX=3661 GN=LOC111486340 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77 Identity = 153/162 (94.44%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Carg13059 vs. ExPASy TrEMBL
Match: A0A5D3CYZ1 (Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004020 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 6.2e-56 Identity = 125/166 (75.30%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of Carg13059 vs. ExPASy TrEMBL
Match: A0A1S3BTI3 (uncharacterized protein LOC103493107 OS=Cucumis melo OX=3656 GN=LOC103493107 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 6.2e-56 Identity = 125/166 (75.30%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of Carg13059 vs. ExPASy TrEMBL
Match: A0A6J1C6M4 (uncharacterized protein LOC111008455 OS=Momordica charantia OX=3673 GN=LOC111008455 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.4e-54 Identity = 121/150 (80.67%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Carg13059 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Carg13059 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Carg13059 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21 Identity = 67/144 (46.53%), Postives = 87/144 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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