Carg13024 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13024
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Meiotic nuclear division protein 1 homolog
Location	Carg_Chr10: 3155653 .. 3158191 (-)
RNA-Seq Expression	Carg13024
Synteny	Carg13024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTCATTTGTTACAATCGTAGCCATACTTATTTCATCATCCGATCGTGTAGAATAGTTTTGCTTTTTCGATGTAATCTAAAATTCGATGAAATGAAAATCTTCCGTCGCGCTTGATTTATGCTCAGAATGCGCGACCTCGGGTTTGGTTGTTCCTTTCTTTTGTTTTTGATAGGTTGAATTTTCTTTACATTCTATCTTGATGTGGAAGATTAGAGTTGGAGCGATTTTGATCGTTGACGATTCTCAGTTTAGGATATTTAGTTTAACAAGCATTTTGCTGAAGGAATCCTTCATTATGAAGTAGAATTCAAATTTAGGGATTTCCTGGTTTTAATACGGTTTACTCAGTTTCCTTTATGATTTTGACAAAATACCGATTCTAGATATCAGGTTTGTGCTCTAACGTTTATGCACTTCTTGGAATTTAATTTGAGAAACAGTCTAAGAAAAGAGGCCTTTCTCTGGAAGAGAAGCGCGAGAAGATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTGTGAGCAAACTTGCACTTCTATTCTTCAATTTTGGAAGTCCTGCAGTTTTATTTCCTATTCCTTTTACTTCATTATTTACAATAAGAAGCTTCCTTCCTTTTTCTCGTTTCAGCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTAGAATTTTTGAGATGAAACTTCCAGTCATCCGTTATTGTGTTTATACTATTTGCACCATGACTTATTCTTTGCGTATGGGTCATAGCCTTCGGACATGATTGTCTCTCATGCATTATGAATCTGTTTTTTCAATTTGCTATGTATTTATGTATGGTTGTAAATTTCAGGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGGTGAAGTCTATATCATTTGTATCATGATTTGTCTAACTCACTTCAAAGGCTTTATATTTATGATGTGTCCAAGCTCGCTCTAAATATTAAATCATCTGAATATTTGATTGAATTTCTACCTCCAAAATATCTCATGTCCCTCTTCGTACCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGTGAGTGATTATATTTTAAGCAAAAGGTAATTGATGAAAAATATTTGCCCTTCTATCATGAATGCTTTCTTCATGCCAGGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGTTTTGCTTGTATTCTGGATTTCTTTCTCTTTTTTATTGGAATAGAAAAATCGATCACGATGATCTTTTAGTTTTCACGCTTCTTTGACAATCTAGTCATTCCCAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGTTGAGTTTCTTTTACCATTTTTTAGATTTTTACTATAGAAAATGGGTTTCAGCTGTTTAATTCTTTCTTGATATCGCTGTGTGCTAAACATGAACATCTTATGGGACAGAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGGTATGCATTCTGACCATAAGCTGCCAACAAGTTTTCTCTGTCTTTCTTCTCTCGTGCCCATTTGAAATTTCTTTCAAAACTCTGTTTATTAACACGCAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCGAAAGAACAACTAGAGAACCTGTATAAAGAGGTAAACCGCACTTCTTTGGTAAAATTGCCCTTCTGCAAGAACTAAAGATATGCTCAAATATAGCACGCACGTCAAATTCCTTATCTTCAACTTTTCATAACGTTGCTTTTCACAGTTTTGGAAAGATAAGAAACAAACCTATACGTCCCAAGAAAATGGGTCTCAATATCTCTAGTTAAAAATTCTCGAGTTATTGGCTGTGTGTGTAAACGCAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAAAGTGGGCAGAAGCTTCAAGCTGATTTAACCGCATGTTTTATGTCTCAATGATTCCGAGGCAACAGTATCATAGATCATGGGCTACAGTTTGACTGAAATTCACCCCATATATATATAGAGCACTGTTCGTTAGTTATACGTGGTAAATAAGAAACATGTCAATTCTTAGATTAAATCTAGGTCCGTTTCCAGAACACTGAGACGTTTGCGATGTTATGTTGCGTTCATGGCTCATGAATCTGTAATGTCTTCTTAGGCGCTATAAGCATGTGATCAATAAACATTTTTAGGCATTGGAATGTGTTCTTATGCAGCAGCAGAGTTTATAGAATTCCTGTGAAATTCGTAGGAAAAAACTGATTTAATTATAGGTTTAGTTTAGTTCATAAGATTT

mRNA sequence

AAGTTCATTTGTTACAATCGTAGCCATACTTATTTCATCATCCGATCGTGTAGAATAGTTTTGCTTTTTCGATGTAATCTAAAATTCGATGAAATGAAAATCTTCCGTCGCGCTTGATTTATGCTCAGAATGCGCGACCTCGGGTTTGGTTGTTCCTTTCTTTTGTTTTTGATAGGTTGAATTTTCTTTACATTCTATCTTGATGTGGAAGATTAGAGTTGGAGCGATTTTGATCGTTGACGATTCTCAGTTTAGGATATTTAGTTTAACAAGCATTTTGCTGAAGGAATCCTTCATTATGAAGTAGAATTCAAATTTAGGGATTTCCTGGTTTTAATACGGTTTACTCAGTTTCCTTTATGATTTTGACAAAATACCGATTCTAGATATCAGGTTTGTGCTCTAACGTTTATGCACTTCTTGGAATTTAATTTGAGAAACAGTCTAAGAAAAGAGGCCTTTCTCTGGAAGAGAAGCGCGAGAAGATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCGAAAGAACAACTAGAGAACCTGTATAAAGAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAAAGTGGGCAGAAGCTTCAAGCTGATTTAACCGCATGTTTTATGTCTCAATGATTCCGAGGCAACAGTATCATAGATCATGGGCTACAGTTTGACTGAAATTCACCCCATATATATATAGAGCACTGTTCGTTAGTTATACGTGGTAAATAAGAAACATGTCAATTCTTAGATTAAATCTAGGTCCGTTTCCAGAACACTGAGACGTTTGCGATGTTATGTTGCGTTCATGGCTCATGAATCTGTAATGTCTTCTTAGGCGCTATAAGCATGTGATCAATAAACATTTTTAGGCATTGGAATGTGTTCTTATGCAGCAGCAGAGTTTATAGAATTCCTGTGAAATTCGTAGGAAAAAACTGATTTAATTATAGGTTTAGTTTAGTTCATAAGATTT

Coding sequence (CDS)

ATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGAAAATGCAATTGA

Protein sequence

MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMRKCN

Homology

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BLAST of Carg13024 vs. NCBI nr
Match: KAG7023633.1 (Meiotic nuclear division protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMRKCN 144
           LKDEMVQYADNDPAAFEAMRKCN
Sbjct: 121 LKDEMVQYADNDPAAFEAMRKCN 143

[Close]

BLAST of Carg13024 vs. NCBI nr
Match: XP_022961005.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_023516621.1 meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 4.9e-67
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]

BLAST of Carg13024 vs. NCBI nr
Match: KAG6589969.1 (Meiotic nuclear division protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264.6 bits (675), Expect = 4.9e-67
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 117 MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 176

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 177 CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 236

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 237 LKDEMVQYADNDPAAFEAMK 256

[Close]

BLAST of Carg13024 vs. NCBI nr
Match: XP_022987867.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]

BLAST of Carg13024 vs. NCBI nr
Match: XP_022987869.1 (meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 61  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 121 LKDEMVQYADNDPAAFEAMK 140

[Close]

BLAST of Carg13024 vs. ExPASy Swiss-Prot
Match: Q8GYD2 (Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.9e-55
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+YFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLR+V +KLESDLQ S  RL EL +Q  ALKKGREESEER EAL QLK IE KHK+
Sbjct: 76  CAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKD 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK+EMVQ+ADNDPA  EA R
Sbjct: 136 LKNEMVQFADNDPATLEAKR 155

[Close]

BLAST of Carg13024 vs. ExPASy Swiss-Prot
Match: Q6DC61 (Meiotic nuclear division protein 1 homolog OS=Danio rerio OX=7955 GN=mnd1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 57/144 (39.58%), Postives = 95/144 (65.97%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF++++D F LK++EK+ P+ KG+   SVK+V+QSLVDD++V  E++GTS Y+W+ P
Sbjct: 16  MMEIFFETKDVFQLKDIEKIAPKSKGITPMSVKEVLQSLVDDNMVDTERVGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +    +LE  L+    R + L +  +  K GRE +EERE+ L +L A++ +  
Sbjct: 76  SKALHARKRRLEELEKQLEDGSQRKKALQQAVDKAKVGREVNEEREDLLKELTALKGQRD 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           ++K E+ +Y + DPA  E +R  N
Sbjct: 136 QMKVEIEKYQECDPAVVEEIRNAN 159

[Close]

BLAST of Carg13024 vs. ExPASy Swiss-Prot
Match: Q5XGY9 (Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 55/144 (38.19%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF++++D F LK+LEK+ P+ KG+ S SVK+++QSLVDD +V  E+IGTS YFW+ P
Sbjct: 16  MMEIFFETKDVFQLKDLEKIAPKEKGITSMSVKEILQSLVDDGMVDSERIGTSNYFWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +     LE+     K + E L +  +  K GR+++EER + + +L ++  + +
Sbjct: 76  SKALHARKRKLETLEAQFTEVKQKKESLQQCVDKAKVGRQDTEERSKLVEELASLRHRKE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           EL  ++ +Y + DP   E +R+ N
Sbjct: 136 ELCADLEKYKECDPDVVEEIRQSN 159

[Close]

BLAST of Carg13024 vs. ExPASy Swiss-Prot
Match: Q32L19 (Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 55/144 (38.19%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IFY+++D F LK++EK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ P
Sbjct: 16  MMEIFYETKDVFQLKDMEKIAPKEKGITTMSVKEVLQSLVDDGMVDCERIGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +     L+S L     +   L +     K GR E+EER     +L ++  + +
Sbjct: 76  SKALHARKRKLEVLDSQLSEGNQKYANLQKSIEKAKVGRHETEERTMLAKELSSLRDQRE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           +LK E+ +Y + DP   E +R+ N
Sbjct: 136 QLKAEVEKYRECDPQVVEEIRQAN 159

[Close]

BLAST of Carg13024 vs. ExPASy Swiss-Prot
Match: Q9BWT6 (Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.1e-20
Identity = 57/144 (39.58%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF +++D F LK+LEK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ P
Sbjct: 16  MMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  ++    LES L     +   L +     K GR E+EER     +L ++  + +
Sbjct: 76  SKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEERTRLAKELSSLRDQRE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           +LK E+ +Y D DP   E +R+ N
Sbjct: 136 QLKAEVEKYKDCDPQVVEEIRQAN 159

[Close]

BLAST of Carg13024 vs. ExPASy TrEMBL
Match: A0A6J1HAQ5 (Meiotic nuclear division protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461640 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]

BLAST of Carg13024 vs. ExPASy TrEMBL
Match: A0A6J1JBJ2 (Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485279 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.0e-67
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]

BLAST of Carg13024 vs. ExPASy TrEMBL
Match: A0A6J1JK16 (Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485279 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.0e-67
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 61  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 121 LKDEMVQYADNDPAAFEAMK 140

[Close]

BLAST of Carg13024 vs. ExPASy TrEMBL
Match: A0A5D3CDS1 (Meiotic nuclear division protein 1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002700 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYESQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQ SKNRLEELTEQ   LKKGREESEEREEALA+LKAIELKHKE
Sbjct: 61  CAGNQLRNVYRKLESDLQNSKNRLEELTEQCKQLKKGREESEEREEALAELKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDE++QYADNDPAAFEAM+
Sbjct: 121 LKDEVLQYADNDPAAFEAMK 140

[Close]

BLAST of Carg13024 vs. ExPASy TrEMBL
Match: A0A1S4DYD0 (Meiotic nuclear division protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492285 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYESQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQ SKNRLEELTEQ   LKKGREESEEREEALA+LKAIELKHKE
Sbjct: 61  CAGNQLRNVYRKLESDLQNSKNRLEELTEQCKQLKKGREESEEREEALAELKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDE++QYADNDPAAFEAM+
Sbjct: 121 LKDEVLQYADNDPAAFEAMK 140

[Close]

BLAST of Carg13024 vs. TAIR 10
Match: AT4G29170.1 (Mnd1 family protein )

HSP 1 Score: 214.2 bits (544), Expect = 7.1e-56
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+YFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLR+V +KLESDLQ S  RL EL +Q  ALKKGREESEER EAL QLK IE KHK+
Sbjct: 76  CAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKD 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK+EMVQ+ADNDPA  EA R
Sbjct: 136 LKNEMVQFADNDPATLEAKR 155

[Close]

BLAST of Carg13024 vs. TAIR 10
Match: AT4G29170.2 (Mnd1 family protein )

HSP 1 Score: 214.2 bits (544), Expect = 7.1e-56
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+YFWSLPS
Sbjct: 1   MLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLR+V +KLESDLQ S  RL EL +Q  ALKKGREESEER EAL QLK IE KHK+
Sbjct: 61  CAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKD 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK+EMVQ+ADNDPA  EA R
Sbjct: 121 LKNEMVQFADNDPATLEAKR 140

The following BLAST results are available for this feature:

BLAST of Carg13024 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023633.1	1.1e-69	100.00	Meiotic nuclear division protein 1-like protein [Cucurbita argyrosperma subsp. a...	[more]
XP_022961005.1	4.9e-67	99.29	meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_0...	[more]
KAG6589969.1	4.9e-67	99.29	Meiotic nuclear division protein 1-like protein, partial [Cucurbita argyrosperma...	[more]
XP_022987867.1	1.9e-66	98.57	meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima]	[more]
XP_022987869.1	1.9e-66	98.57	meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg13024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYD2	9.9e-55	79.29	Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MN...	[more]
Q6DC61	1.3e-22	39.58	Meiotic nuclear division protein 1 homolog OS=Danio rerio OX=7955 GN=mnd1 PE=2 S...	[more]
Q5XGY9	5.5e-21	38.19	Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=...	[more]
Q32L19	2.1e-20	38.19	Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV...	[more]
Q9BWT6	6.1e-20	39.58	Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 ...	[more]

BLAST of Carg13024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAQ5	2.4e-67	99.29	Meiotic nuclear division protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JBJ2	9.0e-67	98.57	Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JK16	9.0e-67	98.57	Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3CDS1	2.7e-63	93.57	Meiotic nuclear division protein 1 homolog OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S4DYD0	2.7e-63	93.57	Meiotic nuclear division protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]

BLAST of Carg13024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29170.1	7.1e-56	79.29	Mnd1 family protein	[more]
AT4G29170.2	7.1e-56	79.29	Mnd1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..106
None	No IPR available	PANTHER	PTHR31398	MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG	coord: 1..141
IPR040453	Mnd1, HTH domain	PFAM	PF03962	Mnd1	coord: 1..59 e-value: 1.7E-25 score: 89.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13024-RA	Carg13024-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0009553	embryo sac development
biological_process	GO:0009555	pollen development
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010212	response to ionizing radiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding