Carg13017 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13017
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribonuclease P protein component 3
Location	Carg_Chr10: 3193268 .. 3195630 (+)
RNA-Seq Expression	Carg13017
Synteny	Carg13017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGGCCGCGCCGTTTGCCGGTTGATTTTCGAGTTCATTCGAACTTCCATTTCTTCTCAATTTTCAGGAACTTTTGATCTTCAAACGTTCATCGTTGCTGATTCTGAATCCGTCCATTGCTTCCATACAACGAAATGATTGTCTTGCAATTATCCGACGGTATTCTCACGCCGCCTCATCTTCCGATCGACGCTAAAATTTCTCGCCGAGCCAACCATGTCCTTACTCCATCATCGGTCTGTAAAGTTCATCACCGAAATTCTTTTCCTAGGCTTGAGCTGCGCCAATGCGTGACCAGATCTAGCCGCGACCAAAAATCGGAAACTCAGAATATCCCGTCCAGTGAAATCGAAGTGGTGGATGAAGAAGGCGAAGATTATGATGCAGACGATGGATTTTTTAGTGCGAGTGGGTTTAGAGGAAGAGAAGGGGAAAAGGACTACGATCGAGACCCTGAGTTCGCTGAAATTATCGGAACTAGTGTTGATGATCCAGAGAAATTTCGGTCCAAAGTAAAGCTTTCTTATCTCTTCCTTGTAGTCGCCTTTTCTATGTTATTTGAACATATTGCATTCATTTGAACTATTAAGTGGACATTTTCGACTTAAACTTCTCGTTGCTGCTTAATGGCAATCATTCTTTTTGAGTCATTCATTTATGTTCTAGGGTTCGTCTAGGAGTGCAAATATGATGATCCAAGATGAAATATGTAGATGAACACGCGTCAGTATTCATTAGAAGCGTTTTCGTTTTCAGCTTTCTGTGTTTAAATTGTAGATGGAAGAGAGGCTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAAACGGGATCAGCCGTTCCAGTAAAAGTTACATTCAACAAGTAAGCTAAATTCTACGACGTGTAGTCCATGGATGAATGCATGTGATTGTGCCTGAGGCAGTGAAACAGAGAACCCTAGTGATGAACTATCTATTCAATAACTTATGAGAACTTTTTGTTGAATGTTTTTTATGGTAGCATGATTCGATTACGTATATATTATCTCTTTAGTCTCGAATTTGACATATGAGTTGTCAATGTTTCTTCCAGATTCGATTTCTCGAACTCGTATATATGGTTTGAATTCTACAACACTCCATTGGCCAAAGATATCACCTTAATTTGTGATGTAAGTTCTTGTTTCTTTTATGTTAGCTTTTGCCTAAAAGAACTTGAGTGAGTTAGATTTATTATCTTTGTTCATAGACCATTAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGGTAAACTTCAATATCTCACCCAACATTTATGTTCTTTAGCTATGCCCTGTCCAAGTTGTTAAAGGGTTTGCATGATTTTACTTGGAAATGAATCACATTAGTCATCGTTGCTCATTTAAGTTCATCTCCTCAGCTTTCTCAATCTCCATTGGATAAACGGCCAAGTTATGACGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAGGACAACTTGGCTCGCATATGGTAATAGCTCTTAGTCTAATTTCCTTGATGTCGACGTCGAGATCTACTGTTCATATTAACATGACACGGGTGTGTTCATATAATCTTTCTCATTGATCTACTTAATTTTATGCACAGGGTTGATATCGGGACGAGCGAACCGTTGATTCTAGATATTTTGATAAATGCATTAACCCAGATTAGTTCTGAGTAAGTTCCTACTACACTTCTTACTAATGTCTTCTTTCCTAAATTTAGTTTCCAAATATAAACACTTTTGCTCTTCCTATTATCTGCTGCCTGTGAAGTGTGCAATAGAATCACTGGATTTTCACCCTCTTACACAAATCAGTTGTTTTTGGGTTTGGGTTTGGGTTTGGGTTTTGCATTTCTTCTTCTTCTCATATGAGCTCTTTATGGGTATTGGTTTACTAATTGCTGATATACTTTTATGGCCCTCCAAAATGTTGACAAATCAGCTACGTTGGAATCAAACAATTGGTATTTGGTGGATCAGAGTTTGAGAATTGGAAAGAGAATTTGACATCAGAAGATGCAGGTTACAGCACTCACAAAATATAGTTTATACTTCCTAACCATCTTAAGAATGCCTCCATTGCTTCTCTAGCAATACGGGAAGTTTTTCAGCTGCAAGGATGGGAATGCTTCACCTCATTGTCTGCCAGTCTCTAGGAGATTAGTAATGAAAGAGAATAAGTCACACAAAATTTGTCTATTGGCTCATCATTTGTTCCAGCAAGTCATTCATGGGAAAGGGCACAAGTTATGTTTGTTTACCTAATTTTCTCGATGATTTGCCTACAAATCTCATGTTCTATT

mRNA sequence

AGCGGCCGCGCCGTTTGCCGGTTGATTTTCGAGTTCATTCGAACTTCCATTTCTTCTCAATTTTCAGGAACTTTTGATCTTCAAACGTTCATCGTTGCTGATTCTGAATCCGTCCATTGCTTCCATACAACGAAATGATTGTCTTGCAATTATCCGACGGTATTCTCACGCCGCCTCATCTTCCGATCGACGCTAAAATTTCTCGCCGAGCCAACCATGTCCTTACTCCATCATCGGTCTGTAAAGTTCATCACCGAAATTCTTTTCCTAGGCTTGAGCTGCGCCAATGCGTGACCAGATCTAGCCGCGACCAAAAATCGGAAACTCAGAATATCCCGTCCAGTGAAATCGAAGTGGTGGATGAAGAAGGCGAAGATTATGATGCAGACGATGGATTTTTTAGTGCGAGTGGGTTTAGAGGAAGAGAAGGGGAAAAGGACTACGATCGAGACCCTGAGTTCGCTGAAATTATCGGAACTAGTGTTGATGATCCAGAGAAATTTCGGTCCAAAATGGAAGAGAGGCTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAAACGGGATCAGCCGTTCCAGTAAAAGTTACATTCAACAAATTCGATTTCTCGAACTCGTATATATGGTTTGAATTCTACAACACTCCATTGGCCAAAGATATCACCTTAATTTGTGATACCATTAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTTTCTCAATCTCCATTGGATAAACGGCCAAGTTATGACGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAGGACAACTTGGCTCGCATATGGGTTGATATCGGGACGAGCGAACCGTTGATTCTAGATATTTTGATAAATGCATTAACCCAGATTAGTTCTGACTACGTTGGAATCAAACAATTGGTATTTGGTGGATCAGAGTTTGAGAATTGGAAAGAGAATTTGACATCAGAAGATGCAGGTTACAGCACTCACAAAATATAGTTTATACTTCCTAACCATCTTAAGAATGCCTCCATTGCTTCTCTAGCAATACGGGAAGTTTTTCAGCTGCAAGGATGGGAATGCTTCACCTCATTGTCTGCCAGTCTCTAGGAGATTAGTAATGAAAGAGAATAAGTCACACAAAATTTGTCTATTGGCTCATCATTTGTTCCAGCAAGTCATTCATGGGAAAGGGCACAAGTTATGTTTGTTTACCTAATTTTCTCGATGATTTGCCTACAAATCTCATGTTCTATT

Coding sequence (CDS)

ATGATTGTCTTGCAATTATCCGACGGTATTCTCACGCCGCCTCATCTTCCGATCGACGCTAAAATTTCTCGCCGAGCCAACCATGTCCTTACTCCATCATCGGTCTGTAAAGTTCATCACCGAAATTCTTTTCCTAGGCTTGAGCTGCGCCAATGCGTGACCAGATCTAGCCGCGACCAAAAATCGGAAACTCAGAATATCCCGTCCAGTGAAATCGAAGTGGTGGATGAAGAAGGCGAAGATTATGATGCAGACGATGGATTTTTTAGTGCGAGTGGGTTTAGAGGAAGAGAAGGGGAAAAGGACTACGATCGAGACCCTGAGTTCGCTGAAATTATCGGAACTAGTGTTGATGATCCAGAGAAATTTCGGTCCAAAATGGAAGAGAGGCTGAGGAAGAAAAGGAACAAGATATTGCAGCCAAAAACGGGATCAGCCGTTCCAGTAAAAGTTACATTCAACAAATTCGATTTCTCGAACTCGTATATATGGTTTGAATTCTACAACACTCCATTGGCCAAAGATATCACCTTAATTTGTGATACCATTAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTTTCTCAATCTCCATTGGATAAACGGCCAAGTTATGACGCTATTCAGGGAGCCAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAGGACAACTTGGCTCGCATATGGGTTGATATCGGGACGAGCGAACCGTTGATTCTAGATATTTTGATAAATGCATTAACCCAGATTAGTTCTGACTACGTTGGAATCAAACAATTGGTATTTGGTGGATCAGAGTTTGAGAATTGGAAAGAGAATTTGACATCAGAAGATGCAGGTTACAGCACTCACAAAATATAG

Protein sequence

MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI

Homology

[Close]

BLAST of Carg13017 vs. NCBI nr
Match: KAG6589976.1 (hypothetical protein SDJN03_15399, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023640.1 hypothetical protein SDJN02_14666 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 602.1 bits (1551), Expect = 2.7e-168
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ 60
           MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ
Sbjct: 1   MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ 60

Query: 61  KSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120
           KSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP
Sbjct: 61  KSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120

Query: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180
           EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC
Sbjct: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180

Query: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLAR 240
           DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLAR
Sbjct: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLAR 240

Query: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 300
           IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI
Sbjct: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 299

[Close]

BLAST of Carg13017 vs. NCBI nr
Match: XP_022960849.1 (uncharacterized protein LOC111461533 [Cucurbita moschata])

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-164
Identity = 297/302 (98.34%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVLQLSDGILTPPHLP   IDAKISRRANHVL PSSVCKVHHRNSFPRLELRQ VTRSS
Sbjct: 1   MIVLQLSDGILTPPHLPIRTIDAKISRRANHVLHPSSVCKVHHRNSFPRLELRQYVTRSS 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120
           RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV
Sbjct: 61  RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120

Query: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180
           DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT
Sbjct: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180

Query: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240
           LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN
Sbjct: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240

Query: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300
           LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH
Sbjct: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300

[Close]

BLAST of Carg13017 vs. NCBI nr
Match: XP_022987807.1 (uncharacterized protein LOC111485243 [Cucurbita maxima])

HSP 1 Score: 579.7 bits (1493), Expect = 1.4e-161
Identity = 290/299 (96.99%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ 60
           MIVLQLSDGILTP HLPIDAKISRRANHVLTPSSVCKV  RN FPRLE RQCVT+SSRDQ
Sbjct: 1   MIVLQLSDGILTPRHLPIDAKISRRANHVLTPSSVCKVRPRNHFPRLEQRQCVTKSSRDQ 60

Query: 61  KSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120
           KSETQNIPSSEIEVVDEE  DYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP
Sbjct: 61  KSETQNIPSSEIEVVDEEDGDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120

Query: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180
           EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC
Sbjct: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180

Query: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLAR 240
           DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYD+IQGANVTPTTFYNIGDFEVQDNLAR
Sbjct: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDSIQGANVTPTTFYNIGDFEVQDNLAR 240

Query: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 300
           IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI
Sbjct: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 299

[Close]

BLAST of Carg13017 vs. NCBI nr
Match: XP_023516267.1 (uncharacterized protein LOC111780172 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.4 bits (1487), Expect = 7.1e-161
Identity = 292/302 (96.69%), Postives = 293/302 (97.02%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLPI---DAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVLQLSDGILTPPHLPI   DAKISRRANH LTPSSVCKV   N  PRLELRQCVTRSS
Sbjct: 1   MIVLQLSDGILTPPHLPIRTVDAKISRRANHFLTPSSVCKVRPWNFSPRLELRQCVTRSS 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120
           RDQKSETQNIPSSEIEVV+EEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV
Sbjct: 61  RDQKSETQNIPSSEIEVVNEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120

Query: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180
           DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT
Sbjct: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180

Query: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240
           LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN
Sbjct: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240

Query: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300
           LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH
Sbjct: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300

[Close]

BLAST of Carg13017 vs. NCBI nr
Match: XP_038880255.1 (uncharacterized protein LOC120071909 [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.6e-131
Identity = 248/303 (81.85%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVL   + IL    LP   IDAKISR  NH  +PSS+ +       P    R  +T ++
Sbjct: 1   MIVLPFYNSILPSLRLPVTTIDAKISRPTNHFFSPSSISR-----PLP----RSFLTTAT 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120
           RDQKSE QN PS+EIE VDEE EDY D DD F+S SGFRGREGEKDYDRDPEFAEIIG S
Sbjct: 61  RDQKSEIQNFPSTEIEAVDEEREDYDDGDDRFWSESGFRGREGEKDYDRDPEFAEIIGAS 120

Query: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGS VP+KVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSGVPIKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICDTIRSWH+IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHVIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300
           NLARIWVDIGTSEPL+LDILINALTQISSDYVGIKQLVFGGSEFENWKE+LTSEDAGYST
Sbjct: 241 NLARIWVDIGTSEPLLLDILINALTQISSDYVGIKQLVFGGSEFENWKEDLTSEDAGYST 294

[Close]

BLAST of Carg13017 vs. ExPASy TrEMBL
Match: A0A6J1HCA8 (uncharacterized protein LOC111461533 OS=Cucurbita moschata OX=3662 GN=LOC111461533 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 6.7e-165
Identity = 297/302 (98.34%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVLQLSDGILTPPHLP   IDAKISRRANHVL PSSVCKVHHRNSFPRLELRQ VTRSS
Sbjct: 1   MIVLQLSDGILTPPHLPIRTIDAKISRRANHVLHPSSVCKVHHRNSFPRLELRQYVTRSS 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120
           RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV
Sbjct: 61  RDQKSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSV 120

Query: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180
           DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT
Sbjct: 121 DDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 180

Query: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240
           LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN
Sbjct: 181 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 240

Query: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300
           LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH
Sbjct: 241 LARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTH 300

[Close]

BLAST of Carg13017 vs. ExPASy TrEMBL
Match: A0A6J1JBD6 (uncharacterized protein LOC111485243 OS=Cucurbita maxima OX=3661 GN=LOC111485243 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 6.9e-162
Identity = 290/299 (96.99%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLPIDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSSRDQ 60
           MIVLQLSDGILTP HLPIDAKISRRANHVLTPSSVCKV  RN FPRLE RQCVT+SSRDQ
Sbjct: 1   MIVLQLSDGILTPRHLPIDAKISRRANHVLTPSSVCKVRPRNHFPRLEQRQCVTKSSRDQ 60

Query: 61  KSETQNIPSSEIEVVDEEGEDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120
           KSETQNIPSSEIEVVDEE  DYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP
Sbjct: 61  KSETQNIPSSEIEVVDEEDGDYDADDGFFSASGFRGREGEKDYDRDPEFAEIIGTSVDDP 120

Query: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180
           EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC
Sbjct: 121 EKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLIC 180

Query: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLAR 240
           DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYD+IQGANVTPTTFYNIGDFEVQDNLAR
Sbjct: 181 DTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDSIQGANVTPTTFYNIGDFEVQDNLAR 240

Query: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 300
           IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI
Sbjct: 241 IWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 299

[Close]

BLAST of Carg13017 vs. ExPASy TrEMBL
Match: A0A0A0LZB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580220 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.5e-132
Identity = 248/303 (81.85%), Postives = 264/303 (87.13%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           M+VLQ    I  P  LP   I AKIS   NH+L P ++ K  HRN          ++R++
Sbjct: 1   MVVLQFHHSIFLPIRLPITTIGAKISLPTNHLLPPYTLSKPLHRN---------FLSRAT 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120
           RDQKSE  NIPS+EIEVVDEEGEDY D DD F+S SGFRGREGEKDYDRDPEFAEIIGTS
Sbjct: 61  RDQKSEIYNIPSTEIEVVDEEGEDYDDGDDRFWSESGFRGREGEKDYDRDPEFAEIIGTS 120

Query: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDP+K RSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 LDDPDKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANV PTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVNPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300
           NLARIWVDIGTSEPL+LD+LINAL QISSDYVGIKQLVFGGSEFENWKE+LT+EDAGYST
Sbjct: 241 NLARIWVDIGTSEPLLLDVLINALIQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYST 294

[Close]

BLAST of Carg13017 vs. ExPASy TrEMBL
Match: A0A1S3BQT1 (uncharacterized protein LOC103492292 OS=Cucumis melo OX=3656 GN=LOC103492292 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.9e-131
Identity = 248/303 (81.85%), Postives = 264/303 (87.13%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVLQ    IL+P  LP   I AKIS   N+ L P ++ K  HRN          ++ ++
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRN---------FLSSAA 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120
           RD+KSE  NIPS+EIEVVDEE EDY D DD F+S SGFRGRE EKDYDRDPEFAEIIGTS
Sbjct: 61  RDKKSEIYNIPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTS 120

Query: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300
           NLARIWVDIGTSEPL+LD+LINALTQISSDYVGIKQLVFGGSEFENWKE+LT+EDAGYST
Sbjct: 241 NLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYST 294

[Close]

BLAST of Carg13017 vs. ExPASy TrEMBL
Match: A0A5D3CFI6 (Ribonuclease P protein component 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002630 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.9e-131
Identity = 248/303 (81.85%), Postives = 264/303 (87.13%), Query Frame = 0


Query: 1   MIVLQLSDGILTPPHLP---IDAKISRRANHVLTPSSVCKVHHRNSFPRLELRQCVTRSS 60
           MIVLQ    IL+P  LP   I AKIS   N+ L P ++ K  HRN          ++ ++
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRN---------FLSSAA 60

Query: 61  RDQKSETQNIPSSEIEVVDEEGEDY-DADDGFFSASGFRGREGEKDYDRDPEFAEIIGTS 120
           RD+KSE  NIPS+EIEVVDEE EDY D DD F+S SGFRGRE EKDYDRDPEFAEIIGTS
Sbjct: 61  RDKKSEIYNIPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTS 120

Query: 121 VDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180
           +DDPEK RSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI
Sbjct: 121 LDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDI 180

Query: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240
           TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD
Sbjct: 181 TLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQD 240

Query: 241 NLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYST 300
           NLARIWVDIGTSEPL+LD+LINALTQISSDYVGIKQLVFGGSEFENWKE+LT+EDAGYST
Sbjct: 241 NLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYST 294

[Close]

BLAST of Carg13017 vs. TAIR 10
Match: AT4G29400.1 (Protein of unknown function (DUF3531) )

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-92
Identity = 164/231 (71.00%), Postives = 197/231 (85.28%), Query Frame = 0


Query: 71  EIEVVDEEGEDYDADDGFFSASG--FRGREGEKDYDRDPEFAEIIGTSVDDPEKFRSKME 130
           E E VD +G+D + +D F +     +R ++ + DYD+DPEFA+I+G  +D+P+K + KME
Sbjct: 73  EFEEVD-DGDDDEVEDEFSAKKRGVYRAKKEKIDYDKDPEFADILGDCLDNPDKAQKKME 132

Query: 131 ERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHI 190
           ERLRKKRNKIL  KTGSA  + VTFNKF++SNSY+W EFYNTPL KDI LI DTIRSWHI
Sbjct: 133 ERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISDTIRSWHI 192

Query: 191 IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTS 250
           +GRLGG NSMNMQLSQ+PLDKRP+YDAI GANV PTTFYNIGD EVQDN+ARIW+DIGTS
Sbjct: 193 LGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARIWLDIGTS 252

Query: 251 EPLILDILINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 300
           EPLILD+LINALTQISSDYVGIK++VFGGSEFE+WKEN+TSE++G+  HKI
Sbjct: 253 EPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKENMTSEESGFRVHKI 302

[Close]

BLAST of Carg13017 vs. TAIR 10
Match: AT5G08400.1 (Protein of unknown function (DUF3531) )

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-49
Identity = 89/194 (45.88%), Postives = 131/194 (67.53%), Query Frame = 0


Query: 106 DPEFAEIIGTSVDDPEKFRSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWF 165
           D E   ++G S+ +PE  R K+EER+RKK     + KTGS +  KV F  F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 166 EFYNTPLAKDITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTT 225
           E Y TP  +D+ LI   I++W+++GRLG  N+ N+QL+ + L+  P YDA +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 226 FYNIGDFEVQDNLARIWVDIGTSEPLILDILINALTQISSDYVGIKQLVFGGSEFENWKE 285
           F++I D E QDN  R+WVD+GTS+   LD+L+N LT +SS+Y+GI+Q+VFGG    +W+E
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 319

Query: 286 NLTSEDAGYSTHKI 300
            +T+ D GY   KI
Sbjct: 320 GMTNPDFGYKYFKI 333

[Close]

BLAST of Carg13017 vs. TAIR 10
Match: AT5G08400.2 (Protein of unknown function (DUF3531) )

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-49
Identity = 94/222 (42.34%), Postives = 139/222 (62.61%), Query Frame = 0


Query: 95  RGREGEKDYDR-----------------DPEFAEIIGTSVDDPEKFRSKMEERLRKKRNK 154
           R  + ++DYDR                 D E   ++G S+ +PE  R K+EER+RKK   
Sbjct: 79  REEKRKRDYDRLHDYPSWAKVLESACKDDEELRAVLGDSIGNPELMRKKVEERVRKKGKD 138

Query: 155 ILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHIIGRLGGCNS 214
             + KTGS +  KV F  F+  +S+IWFE Y TP  +D+ LI   I++W+++GRLG  N+
Sbjct: 139 FQKQKTGSVLSFKVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNT 198

Query: 215 MNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTSEPLILDILI 274
            N+QL+ + L+  P YDA +G  V P++F++I D E QDN  R+WVD+GTS+   LD+L+
Sbjct: 199 SNLQLANTSLEYDPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLL 258

Query: 275 NALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGYSTHKI 300
           N LT +SS+Y+GI+Q+VFGG    +W+E +T+ D GY   KI
Sbjct: 259 NCLTVMSSEYLGIQQVVFGGKRMGDWEEGMTNPDFGYKYFKI 300

The following BLAST results are available for this feature:

BLAST of Carg13017 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589976.1	2.7e-168	100.00	hypothetical protein SDJN03_15399, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960849.1	1.4e-164	98.34	uncharacterized protein LOC111461533 [Cucurbita moschata]	[more]
XP_022987807.1	1.4e-161	96.99	uncharacterized protein LOC111485243 [Cucurbita maxima]	[more]
XP_023516267.1	7.1e-161	96.69	uncharacterized protein LOC111780172 [Cucurbita pepo subsp. pepo]	[more]
XP_038880255.1	2.6e-131	81.85	uncharacterized protein LOC120071909 [Benincasa hispida]	[more]

BLAST of Carg13017 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg13017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCA8	6.7e-165	98.34	uncharacterized protein LOC111461533 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JBD6	6.9e-162	96.99	uncharacterized protein LOC111485243 OS=Cucurbita maxima OX=3661 GN=LOC111485243...	[more]
A0A0A0LZB5	1.5e-132	81.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580220 PE=4 SV=1	[more]
A0A1S3BQT1	4.9e-131	81.85	uncharacterized protein LOC103492292 OS=Cucumis melo OX=3656 GN=LOC103492292 PE=...	[more]
A0A5D3CFI6	4.9e-131	81.85	Ribonuclease P protein component 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Carg13017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29400.1	2.0e-92	71.00	Protein of unknown function (DUF3531)	[more]
AT5G08400.1	1.6e-49	45.88	Protein of unknown function (DUF3531)	[more]
AT5G08400.2	2.1e-49	42.34	Protein of unknown function (DUF3531)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021920	Protein of unknown function DUF3531	PFAM	PF12049	DUF3531	coord: 150..289 e-value: 9.2E-53 score: 178.0
None	No IPR available	PANTHER	PTHR46737	OS02G0827600 PROTEIN	coord: 16..299
None	No IPR available	PANTHER	PTHR46737:SF3	OXIDOREDUCTASE/TRANSITION METAL ION-BINDING PROTEIN (DUF3531)	coord: 16..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13017-RA	Carg13017-RA	mRNA