
Carg12993 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCGAATCTCATTCTTAGGCTACAAAGCAAAAGAGAGAGGAAACTAATTGTCTTTCGCACCAAAAAGGGGGCGGAGAGACTGTGCTTGAGGAGCTCTAATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCTGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGGTCCTTCGCACTCCCAAACCCTAATCGCAAGTGTTACTCTAAATCCGATTTTATTAACTAATATTTCTTTGTCTGTTTATTTGTCTATAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATCAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGGTTAACTTTTCAATTTTATTTATGTGCGCGCGCGTGTTTGCATCTATATGTGCATAGTTATTTTTGTTTTTGTCTTGTTGTAATTACCTGCTAGGTTCACTTGAAGATATTGAAAGCTACCGACCACAATGTTAATGTTCGCTTTATGATTTTGATTTTTTTCGTGAAATTTCACCTCGCTAATTCTACTTAGTTAACTAAGAAGCCTCATCGGGTAGTGGACACTCAATTTCCTCTGCAGTGTTGGGTTTTGGCGGTAATTTTGCACGTTTGAGACCTTGGCCATTGAATTATCTTTTCCATGGTTTGGTTATGTGTGGAAAGATGGAAATAAAATGATTATCATTTCGGGTACTTTGTGGAAGTCTTTATGTACGATTGGTCTCCCAAAGAGTTTTTGGGTTCAATTCAATTGTTTGAGCTTGAGCAGACTTAACTTTGTGATCCTTTCATAGACTTGTCCTGATGTACCTACTTAGAGTTAGCGTTTCTGATATTGGATCTTTGCAGATTGTCGGAAATCGAACATTTATGATGAGTATATGTATAGTTAATTGATCCTAAAATATATTGTTTTATCTAGTTAGTCGAATTTCTTTTATTTCAAAGACATTGTAGCAAGTAATCCCATTAATTTTTTCCCCTTTTGCCAATTTGTTCACTTACCCCTATTCTCAAGGTAACATTTGATTTGGTTATCTGACATCTTCCGACTGTATGGTATTTTAACTGACATTGGCTTCTCCATAATAATTTTATATTTGTTTGGTCTCAACCTATGACTTATAGCTCTAGTCTCTCTTCTCTCTTTTGGTGGAGAAATACAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGCGGCAAGATAAAGAAAAAAGTAATTTAGTTATTAAACTCAGTTCTGTTGTCACTCTTCAATAAGACGTTAACATGATGGATCTAATTAGTTGGATGTTCATGTAGGAGAGACAAGAAGTTATTATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGTGAGCAATACTTTGTTTTCTATCCCTACTTGACATTTCTATTGTTACATTAATTTTCAATAACAGTGTCTGTAACTGTTTTTAGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGTTATTCACTTCTGGTGTCATGACTCAAGTATCTTTCTACTGTTGATGCTTCTTGATATCTTATCATCTGCTTAATGCTTGGTTTTAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTAAGATACTTATTCATTATTAATTTTTTAGGGATAAAAGAATAAACCAGCCCTCCATTCCTCTGAACTCAATACAATACATCACTGTACTTGAATAAGGTTGATGATTTCTAGTATGAGCTGCTCATGAATTATAATGGATCTGGTTAGTTTTAATAACGTTGACACTCTCAACTTCTGGTGATATAAATAAGGTTGGCACTACTTGTTTTTTCTGTAAAGGGTCTACCTGTTCAATTAATTTTTTAGGGATAAAATAATAAACCAGCCCCCCATTCCTCTGAACTCAATACATCACTGTACTTGAATAGGGTTGATGATTTCTAGTATGCGCTGCTCATAAATTATAATGGATCTTGTTAGTTTTAATAAACGTTAGACACTTTCAACTTCTGGTGATATAAATAAGGTTGGCACTATTTGTTTTTCTGTTAAGGGTCTACGTGTTCAATTATATTTCTCCATTATCAAGTGATTTTAAAATCGTAACAATTTTGTGATATAACACTCCCATCTCTCAATAGGCCCATCCTCCACTGTGATGTTATGCTTGTCTTGTTCTCCCACCCTCTCTCTCTCTAAAATTTTGCTGGATCTTGGCATCAATTAAGCATTTGAAGTTGGTGTCAGTTTGTGAATGGGTAGTCTCCTTCCTCACCCCTCTTTAAGAATTGGTTGAGTGGATTGGGACTATAAATATTAGCAGTTTGGTCCTTTAAGACTCTAGTATGACACTTTCTCATCGCATTGGACAAAATCTTTGTCTAAGCTTTAAGTTTTAATCTTTAACTGTTCTTTTATTATTTTCATAATCCTGTCCAATTTATTGACTTAATTCTTACATCCCTGCTTTCTGATTTGTAGTTGTCCATGTTCTTATGATCTACTACCTGTTTTGGGGTACACTACCTACATTTTTTGTTTCATAAATTTTAACGAAAACTTTTAGAAATAGATCTCAAAATTTTCATGGATGGTCACACATACTTGTGCATGTGATGGAGGAGAGGAATAATAGGAAATTGAGAGGGTTTAGGAGGGGCTCTTGTGTTGTCTTGTCCCTCATTAGGTTTTATGTTCCTCTTTAGGTGTCGATGACGAAGTCTTTTTGTCATTACCCTTTAGGTCTCATTTTACTTGCTTGGAGCCCAATTCTTTAGCTGGACTATAACACCACATCCCTAGGATTTAGATCAGGATTTGACATGTAATGACCCCAACATTCTCCTATCCTAAGAGTGAAGTCTATTCCCACAGACCAACACGTGTCCTTCCAGCATGTTTTGTTCTCACTCACATGCATCCTAGGAAAATTCCCCAAAAGGTCACCCAATATAGAATTACTCAAAGCAAAACACGTTTAACCTTGGAGTTTCTATGATTGAGCCATTGAAAAAGAAGATATACCTTGTTGGTATAGGTAGTGACTCTCAATTCTTTTAAGCCTTTCTTAGTTATCCTATCTTCATAATCTCTCTCGGATGTGGTCTTGGTTCATTCATCTACCCCTCCTTACTCAGGTGTCACATGTCCACTAGTTTCTGCGTTAGTTTGTCTCGGAATTCATGTACCCCTCCTTATCGGTATTGACTATGTTCTCTTGACATTTAGGGACATTATATTTAGGGCATGCATGGGATCGATTTTGAAAGGGTTAAAATAACTTTTGTCAGGTTTCGAATTAACTCAAAACAGGCTTTTAATCCTCCAAAATCAATTTAATGTTGGGTTTTACACTTTTAACACGACTTTCACAATAAAAATTGTTTTTGGATGATTATAACCATGTTTCAAAGTGATTTGAACATGAAAAAAGTGATTTTAATAATTTCAAAAATCACTCCAAAACGTGCTATTTTAGTTGTTTTAAGTAAAATCTATGTTTCTTTTAACTAATTTTAGATGTCCTACGCTCCTCTATTCTCTTCTATCATTCCTTTCCTATCCTGCTAATGCTCGAATGTCCGATCTATATGACAAATTGGGGCGTTATTAGAATTTTAGCCTCATGTATAGCATTTCTATGATAACAAGCATGGCCCCATTTAACTGAAGCTCTTTTCTTGATGGGCTGACTCATCCTGCGCTCCTCTATACTTCTAGAACATTAGGTATTAGTACATCATATTGGTGCCGTGGAAGGCCCATCCTTTTTGTTCTAAGAACTTGAGTTGCTCATTCTCCCCTCTTTAATGGGGATGGTGTTATGTAGACCTTCTTTTAGTGCTAAAACCCAATTCATTAGATTGTACATACATTTATGATTGGGTCTAGTGTGGTAGGTTAAATAGATAGAGCTTTAATGTTGGTCTTTTAACCATAAAGTAGGCTTCAACTTGGTTATTTTCCATTTGGCCTTTTACCCCAGTCCTCAACTATCATTTTCTTTAATTGGTCTTTTCCGTCTCTTTGGGGTCTGGCATTGTCATGATGGATACTATGGAGTTTAGACTATTTAGCAAAAAACTGAATTTGAATTTAGAAACAGCTAATGGTTTAGAGAAAAATTAGAACATATCAACTAGGTAAGAAATTAACCAGCCATTTCATTAGTGATACATATAGTTCCACTATAGATGCCTTCTATTTGAACATGACCTTCGACTTCAATTTCACTTTCATTAGTGATACATATAGCTCTACTATAGATGCCTTCTTTTTTAACACCACCTTAGACTTGAACTTCACTTTCTGAACCTAGTATTTTTTGGATTTTTCAATCATGTACCAAGCAATAAATAACAGTGAAATTAAAAACAACTATTTATTTATTCTTGTTCTAATGTAGAAAATGGCGCCCTTTATATTTGTTTTCATAAGTTTGATGTCAAACGAGACTGCTTTTTGAAAAAGTTGTCAATGTTGCTTGATGTTTTCTAATGTTTGATTGCATACTTCATTCCTTGCTAGCTGTACTGTCGTTCCCCTTTCAAATTTCCCTCTCGTCATTTATTTCTAATCATAAATATGTGGGGATAACACATATTTGAAATTTTTTAGAGGGGAATGCCCTCCGGGATAGAGAGGTTCTTTGAGCATTATACATGCCTCTTAATCCATTCTTGTAACAGGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGACAATGAAATCATGGCAAACAAATAATATGTGGGCTTCTGTGCATCCTTTTCCCTTCTTGTGCGAGTCCTTTTAAGATTCCACAAGTAAGTGATCATTACAGTTTTTTTTTTTTT CTCTCGAATCTCATTCTTAGGCTACAAAGCAAAAGAGAGAGGAAACTAATTGTCTTTCGCACCAAAAAGGGGGCGGAGAGACTGTGCTTGAGGAGCTCTAATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCTGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATCAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGCGGCAAGATAAAGAAAAAAGAGAGACAAGAAGTTATTATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGACAATGAAATCATGGCAAACAAATAATATGTGGGCTTCTGTGCATCCTTTTCCCTTCTTGTGCGAGTCCTTTTAAGATTCCACAAGTAAGTGATCATTACAGTTTTTTTTTTTTT ATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCTGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATCAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGCGGCAAGATAAAGAAAAAAGAGAGACAAGAAGTTATTATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGA MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVSNQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETAIFFIEDGKKVPAA Homology
BLAST of Carg12993 vs. NCBI nr
Match: XP_022960996.1 (translation machinery-associated protein 22-like [Cucurbita moschata] >KAG7023664.1 tma22 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. NCBI nr
Match: XP_022987879.1 (translation machinery-associated protein 22-like [Cucurbita maxima]) HSP 1 Score: 382.1 bits (980), Expect = 2.8e-102 Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. NCBI nr
Match: XP_023516091.1 (translation machinery-associated protein 22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.9 bits (977), Expect = 6.3e-102 Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. NCBI nr
Match: KAG6590002.1 (hypothetical protein SDJN03_15425, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101 Identity = 190/191 (99.48%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. NCBI nr
Match: XP_004144004.1 (translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypothetical protein Csa_007666 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 5.0e-99 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy Swiss-Prot
Match: O42929 (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tma22 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-31 Identity = 80/186 (43.01%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy Swiss-Prot
Match: Q2H5Z7 (Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TMA22 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.6e-31 Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy Swiss-Prot
Match: Q9P3T4 (Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tma-22 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.7e-30 Identity = 74/181 (40.88%), Postives = 109/181 (60.22%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy Swiss-Prot
Match: A1DAY1 (Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=tma22 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.3e-29 Identity = 73/186 (39.25%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy Swiss-Prot
Match: Q4WBL6 (Translation machinery-associated protein 22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=tma22 PE=3 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 9.7e-29 Identity = 72/186 (38.71%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy TrEMBL
Match: A0A6J1H953 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111461628 PE=3 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy TrEMBL
Match: A0A6J1JK26 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111485287 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102 Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy TrEMBL
Match: A0A6J1F5N5 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111441062 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97 Identity = 181/193 (93.78%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy TrEMBL
Match: A0A6J1D0S6 (Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LOC111016533 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.3e-97 Identity = 182/193 (94.30%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of Carg12993 vs. ExPASy TrEMBL
Match: A0A6J1HZE2 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111467611 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.6e-97 Identity = 180/193 (93.26%), Postives = 186/193 (96.37%), Query Frame = 0
BLAST of Carg12993 vs. TAIR 10
Match: AT5G11900.1 (Translation initiation factor SUI1 family protein ) HSP 1 Score: 308.5 bits (789), Expect = 3.7e-84 Identity = 156/197 (79.19%), Postives = 172/197 (87.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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