Carg12966 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12966
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein CTR9 homolog isoform X1
Location	Carg_Chr10: 3531285 .. 3534506 (+)
RNA-Seq Expression	Carg12966
Synteny	Carg12966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACAACATCCTGCTAATTTGTATGCTGCTAATGGAGCTGCGGTAATCTTGGCTGAGAAAGGTCAATTTGATGTTTCAAAGGATATTTTTACACAAGTGAGAACTTGTATTATTACTTCAATCTAGAACCTTTTAGAACCTCTTTGTTGTAAAATTAAGGCCATTAGACGTTTTGCTAACTTTTCAGTTGTTGTAGGTTCAAGAAGCTGCAAGTGGGAACATTTTTGTCCAGATGCCAGATGTGTGGATCAATTTGGCACACGTCTATTTTGCTCAAGGAAATTTTTCATTGGCTGTTAAAATGGTACATATTTATATCTTGTTCACAGTTGAATTGTAGGTCTCCTCTTATTAACAAAAAGTTATTGCCGTAATTGCATCCATGAATTAATGCCAAATGTTATCTTGCAGTATCAAAATTGCTTGCGGAAGTTTTATTACAATACAGATTATCAAATTCTTCTATATCTATCTCGTACATATTATGAAGCTGAACAGTGGCAAGACTGCAAAAAGACCCTACTGAGAGCTATCCACTTGGCACCTTCAAATTACACTTTAAGATTTGATGCTGGTGTAGCAATGCAGAAGTTTTCAGCTTCAACACTACAAAAGACGAAGAGGACTGCAGATGAGGTGGTTTCTCTATACTTTTGGCTTATATATTTATTGCTGTTGTGTATTTGTGGATAAATTTCTTCATCTCGATAAGATAGTCTGAATTCGTTAATAAGTTAGCCTGGAAATATGCTCATTAGTAAATTAGTACCGTTGTGATGAAAAAAAAAAAAAAATGTTCCAAGATGATCTAATGGAGTTAGTCTCTTATTATTTTTATTAATGATTCTTCTCTTCTTTTTCCCTTTTTTGGACCTCGAAAGGACAGTCCAGAAACATTTTCTTTTATAAGACATGAGAAAATATTTCATCAATGCCAAGAAAGGTTAACACGGGGGTTAAGATATCTTACTAGCTTTATTAGAAGACTTATGAGAGAAAGAAGCACCACCGAGTAACTGGAAGTAATCAAACAATATTTAAAAATGTTAATAACTGAACTAAACATGAACACTTATCAAAACTATATATGAATAAGTGGACCATTTTTGGTTTGCATGATTCGTTTAGAATTATGCTGTGGTTTTTTTTATGGGGCTTCGGCCTGTAATGGGTTATCGGCTGTGACCTGACAGAGCTGTGATAAGAATTCTTGTAAACCACCATTGGCGGGCTTTTAATTTCATTTATTAGTGAAATATCAATCTCAAATGATGCCATATTATTCACCGAGTTTTGTGATGACCGATCCATCCAGTATCTTCTCCATTTTGTTGGTTCTTTTGAGTTGATTCTGAGACCAATATAAGCCTACACAATTAGTGATAATTGGCATAAAGGTGGAACAAGCCACTATTGAAATTTGGATGCAAAATGGGAGCTCAACCAACTATCTACAACAATGAAATTGTTTTTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTATATAAGTTACAACTTATGTTCCTCCAATATCTGCCTCAATCTTTGACCCCACATCTCCTCCCCTTTTGATTAGCTGTTGCATTAATTCATATTTTTTGCCTCAATTGTAATAATGTATTAGGTGCGTTCAACAGTAGCGGAGCTGGAAAATGCTGTTCGTGTTTTTAGTCAGTTGTCTGCTGCTTCCAACCTCCACTTTCATGGCTTTGATGAGAAGAAGATTGATACTCATGTTGGTTACTGCAAGCACTTACTAGAGGCTGCAGGAGTTCACCTCAAAGCAGCAGAACATGAAGAGCAGCAGGTCCGTCAAAGACAAGAACTAGCACGTCAAGTTGCATTGGCGGAGGATGCCCGTCGTAAGGCAGATGAGCAGAGGAAATTTCAAGTACGAGTTGTTTTATTTCATTAGTTGTACCTATCCCTTTTTTGAAGGAATTTTTTTTTTTTATTTATTGTGAATGATGAGTTCTTGTCTGATATTATTTGCTAAAATAGTTGGAGAGGAGAAAGCTGGAAGATGAGGAAAGACGGATGATGCAACAGGAGCAGCATTTTAAACGTGTGAAGGTAATTATTTTGAATTATATTGTTTCTTTGAGTATTTGATTTATATTGTTACAGGACTTCAGAACGTATGTGAAGAGAAACAGAAAGGGAAAGTTGAAGCGTTTGACATTTTCTATGGACTAATATTTTAGATAAATTCCTTTTAGAGTAGGGATATATGGTTGAGTTTGCATATATGCACTTCAGTAGTATTCGGTAATGCTACGGTTTCTGTCAAAACAAGTAGATGGGATATTCTGTTGCATGTTATTTAGATGGCTATTTTAATCTCCAGTGCTTTTATTTCAAATGATGTTTTTCCTTCTTGGACGATTAAGATATTTAACTGGAGATTCACAGCTTAAAAGTAGCTCATCTAAACTTTCTCCAGGAGCAATGGAAGAGCACCACACCTGCTAAACGAAGAGAAAGGTCAGAGATTGATGATGATGAAGCTGGTGATAGTGAGAAGAGGAGAAGGAAGGGTGGAAAGAGGAGAAAGAAAGACCGGAAGGGGAAATCACATTATGAGACAGAAGAGGCCGACAATGATATGATGGATGATCAAGAACTAGACAATGAAGATAATAACATAAGTTATAGGGAGTCCCGGAGCCAAATGAATTATCAGGACGATGATTTGGAAGGGAATGATCAGGATGCCCTTGCAGAAGCTGGGCTTGAAGATTCTGATGCCGAGGATGAAGCGGTAATACCTATTTACTACCCCTTGATTTTAGCTTTTGAGAAAATATTGGCATCTCGAATCTGAACTCAATTAGACTCTTTTGATACTGCCTCTTGCTATTGCACCTAATTTGCTATAAATTATTGCATCTAGGTTTGAGCAACAATATTGTTCTTATAAATAAAAAAGTTTTTATATATCTTTTCTTGTTTCTTCGTAATCATGTTTAGATTCAATTTGCTTCATTTGCCCGTCCTTTCTAAAACTCCTATTGGTCCTGATTAGTTGGTTTGTGTAACTTGGTTATTTTTTGGGTTTTGAAATTGCAGGGTGTACCTTCATCCAATGCAGCTCGACGAAGAGCCACATGGTCGGAATCTGAAGACGATGAGCCTATGAATATGCAACGAGAATCCCACCTTCAAAGAGAAAACTCCGCAGGACTAGAGGGTAGTGATGGAGAAATCAGATGA

mRNA sequence

ATGGTACAACATCCTGCTAATTTGTATGCTGCTAATGGAGCTGCGGTAATCTTGGCTGAGAAAGGTCAATTTGATGTTTCAAAGGATATTTTTACACAAGTTCAAGAAGCTGCAAGTGGGAACATTTTTGTCCAGATGCCAGATGTGTGGATCAATTTGGCACACGTCTATTTTGCTCAAGGAAATTTTTCATTGGCTGTTAAAATGTATCAAAATTGCTTGCGGAAGTTTTATTACAATACAGATTATCAAATTCTTCTATATCTATCTCGTACATATTATGAAGCTGAACAGTGGCAAGACTGCAAAAAGACCCTACTGAGAGCTATCCACTTGGCACCTTCAAATTACACTTTAAGATTTGATGCTGGTGTAGCAATGCAGAAGTTTTCAGCTTCAACACTACAAAAGACGAAGAGGACTGCAGATGAGGTGCGTTCAACAGTAGCGGAGCTGGAAAATGCTGTTCGTGTTTTTAGTCAGTTGTCTGCTGCTTCCAACCTCCACTTTCATGGCTTTGATGAGAAGAAGATTGATACTCATGTTGGTTACTGCAAGCACTTACTAGAGGCTGCAGGAGTTCACCTCAAAGCAGCAGAACATGAAGAGCAGCAGGTCCGTCAAAGACAAGAACTAGCACGTCAAGTTGCATTGGCGGAGGATGCCCGTCGTAAGGCAGATGAGCAGAGGAAATTTCAATTGGAGAGGAGAAAGCTGGAAGATGAGGAAAGACGGATGATGCAACAGGAGCAGCATTTTAAACGTGTGAAGGAGCAATGGAAGAGCACCACACCTGCTAAACGAAGAGAAAGGTCAGAGATTGATGATGATGAAGCTGGTGATAGTGAGAAGAGGAGAAGGAAGGGTGGAAAGAGGAGAAAGAAAGACCGGAAGGGGAAATCACATTATGAGACAGAAGAGGCCGACAATGATATGATGGATGATCAAGAACTAGACAATGAAGATAATAACATAAGTTATAGGGAGTCCCGGAGCCAAATGAATTATCAGGACGATGATTTGGAAGGGAATGATCAGGATGCCCTTGCAGAAGCTGGGCTTGAAGATTCTGATGCCGAGGATGAAGCGGGTGTACCTTCATCCAATGCAGCTCGACGAAGAGCCACATGGTCGGAATCTGAAGACGATGAGCCTATGAATATGCAACGAGAATCCCACCTTCAAAGAGAAAACTCCGCAGGACTAGAGGGTAGTGATGGAGAAATCAGATGA

Coding sequence (CDS)

ATGGTACAACATCCTGCTAATTTGTATGCTGCTAATGGAGCTGCGGTAATCTTGGCTGAGAAAGGTCAATTTGATGTTTCAAAGGATATTTTTACACAAGTTCAAGAAGCTGCAAGTGGGAACATTTTTGTCCAGATGCCAGATGTGTGGATCAATTTGGCACACGTCTATTTTGCTCAAGGAAATTTTTCATTGGCTGTTAAAATGTATCAAAATTGCTTGCGGAAGTTTTATTACAATACAGATTATCAAATTCTTCTATATCTATCTCGTACATATTATGAAGCTGAACAGTGGCAAGACTGCAAAAAGACCCTACTGAGAGCTATCCACTTGGCACCTTCAAATTACACTTTAAGATTTGATGCTGGTGTAGCAATGCAGAAGTTTTCAGCTTCAACACTACAAAAGACGAAGAGGACTGCAGATGAGGTGCGTTCAACAGTAGCGGAGCTGGAAAATGCTGTTCGTGTTTTTAGTCAGTTGTCTGCTGCTTCCAACCTCCACTTTCATGGCTTTGATGAGAAGAAGATTGATACTCATGTTGGTTACTGCAAGCACTTACTAGAGGCTGCAGGAGTTCACCTCAAAGCAGCAGAACATGAAGAGCAGCAGGTCCGTCAAAGACAAGAACTAGCACGTCAAGTTGCATTGGCGGAGGATGCCCGTCGTAAGGCAGATGAGCAGAGGAAATTTCAATTGGAGAGGAGAAAGCTGGAAGATGAGGAAAGACGGATGATGCAACAGGAGCAGCATTTTAAACGTGTGAAGGAGCAATGGAAGAGCACCACACCTGCTAAACGAAGAGAAAGGTCAGAGATTGATGATGATGAAGCTGGTGATAGTGAGAAGAGGAGAAGGAAGGGTGGAAAGAGGAGAAAGAAAGACCGGAAGGGGAAATCACATTATGAGACAGAAGAGGCCGACAATGATATGATGGATGATCAAGAACTAGACAATGAAGATAATAACATAAGTTATAGGGAGTCCCGGAGCCAAATGAATTATCAGGACGATGATTTGGAAGGGAATGATCAGGATGCCCTTGCAGAAGCTGGGCTTGAAGATTCTGATGCCGAGGATGAAGCGGGTGTACCTTCATCCAATGCAGCTCGACGAAGAGCCACATGGTCGGAATCTGAAGACGATGAGCCTATGAATATGCAACGAGAATCCCACCTTCAAAGAGAAAACTCCGCAGGACTAGAGGGTAGTGATGGAGAAATCAGATGA

Protein sequence

MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR

Homology

[Close]

BLAST of Carg12966 vs. NCBI nr
Match: KAG7023691.1 (Protein CTR9-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
           MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60

Query: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
           GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120

Query: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
           FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180

Query: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
           HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240

Query: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
           DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300

Query: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
           SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360

Query: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
           DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR
Sbjct: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 410

[Close]

BLAST of Carg12966 vs. NCBI nr
Match: XP_022961215.1 (protein CTR9 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 763.8 bits (1971), Expect = 7.4e-217
Identity = 408/410 (99.51%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
           +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 540 LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 599

Query: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
           GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 600 GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 659

Query: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
           FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 660 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 719

Query: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
           HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 720 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 779

Query: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
           DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 780 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 839

Query: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
           SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 840 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 899

Query: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
           DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 900 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 949

[Close]

BLAST of Carg12966 vs. NCBI nr
Match: KAG6590030.1 (Protein CTR9-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 763.8 bits (1971), Expect = 7.4e-217
Identity = 408/410 (99.51%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 2504 LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 2563

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 2564 GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 2623

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 2624 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 2683

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 2684 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 2743

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
            DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 2744 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 2803

Query: 301  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
            SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 2804 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 2863

Query: 361  DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
            DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 2864 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 2913

[Close]

BLAST of Carg12966 vs. NCBI nr
Match: XP_022961214.1 (protein CTR9 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 763.8 bits (1971), Expect = 7.4e-217
Identity = 408/410 (99.51%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 668  LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 727

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 728  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 787

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 788  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 847

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 848  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 907

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
            DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 908  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 967

Query: 301  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
            SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 968  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 1027

Query: 361  DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
            DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 1028 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 1077

[Close]

BLAST of Carg12966 vs. NCBI nr
Match: XP_022987293.1 (protein CTR9 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 761.9 bits (1966), Expect = 2.8e-216
Identity = 406/410 (99.02%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
           +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 537 LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 596

Query: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
           GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQ+CKKTLLRAIHLAPSNYTLR
Sbjct: 597 GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQECKKTLLRAIHLAPSNYTLR 656

Query: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
           FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 657 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 716

Query: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
           HVGYCKHLLEAAGVHLKAAEHEEQQ+RQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 717 HVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLE 776

Query: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
           DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 777 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 836

Query: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
           SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 837 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 896

Query: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
           DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 897 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 946

[Close]

BLAST of Carg12966 vs. ExPASy Swiss-Prot
Match: B5X0I6 (Protein CTR9 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP6 PE=1 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 7.8e-129
Identity = 263/413 (63.68%), Postives = 322/413 (77.97%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            + QH +N+YAANG+ ++LAEKGQFD++KD+FTQVQEAASG++F+QMPDVW+NLAHVYFAQ
Sbjct: 667  LTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLAHVYFAQ 726

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNF+L VKMYQNCLRKF+YNTD QILLYL+RT+YEAEQWQ+CKKTLLRAIHL PSNYT R
Sbjct: 727  GNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTPSNYTFR 786

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FD G  MQK S+STLQK KRTADEVRSTVAE ENAVRVF+QLSAAS+LH HGFD KKI T
Sbjct: 787  FDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFDSKKIQT 846

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HV YC HLLEAA VH +AAE EE Q RQR E+ARQ ALAE+ARRKA+EQRK+QLE+RK E
Sbjct: 847  HVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKYQLEKRKQE 906

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPA--KRRERSEIDDDEAGDSEKRRRKGGKRRKKDRK 300
            +E RR+ Q+E+ F+R+KEQWKS+TP   KR++R E DD E+  SE+RR+KGGKRRKKD+ 
Sbjct: 907  EELRRLKQEEEKFQRIKEQWKSSTPGSNKRKDRVEDDDGESKPSERRRKKGGKRRKKDKS 966

Query: 301  GKS-HYETEEADNDMMDD-QELDNEDNNISY-RESRSQMNYQDDDLEGNDQDALAEAGLE 360
             ++ HYE +E +   MDD  E+++ED N +Y RE        ++ ++ +  D LA AGLE
Sbjct: 967  SRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEMTTQEAEEPVDDDAHDLLAAAGLE 1026

Query: 361  DSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGE 409
            D D +D+  VP+S   RRRA  S  E+ E   +  ESH         E S+GE
Sbjct: 1027 DPDVDDDE-VPTSGVRRRRALSSSDEEGE---LMEESHPNSSPQKEKEESNGE 1075

[Close]

BLAST of Carg12966 vs. ExPASy Swiss-Prot
Match: Q6PD62 (RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30
Identity = 132/437 (30.21%), Postives = 213/437 (48.74%), Query Frame = 0


Query: 7    NLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLA 66
            NLYAANG   +LA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A
Sbjct: 646  NLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISA 705

Query: 67   VKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVA 126
            V+MY+NCLRKFY + + +++LYL+R  ++  + Q+CK+TLL+A H+APS+  L F+  + 
Sbjct: 706  VQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALV 765

Query: 127  MQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCK 186
            +Q+ + S L+  K    EV + V ELE A R FS LS   +     FD     T    C 
Sbjct: 766  LQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDK--MRFDLALAATEARQCS 825

Query: 187  HLLEAAGVHLKAA---EHEEQQVR----QRQELARQVALAEDAR---RKADEQRKFQLER 246
             LL  A  H+  A   + EE+++R    Q +EL RQ  L E      R+ +EQ+K   +R
Sbjct: 826  DLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 885

Query: 247  RKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRER---------SEIDDDEAGDSEKRRR 306
             +  ++ + ++      +  KE+ +     +R ++          + DDD     +K+RR
Sbjct: 886  AQYVEKTKNILMFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRR 945

Query: 307  K------------GGKRRKKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQMN 366
            K            GG+R+KK R  + H + EE      DD E +N       R  +++  
Sbjct: 946  KGSGSEQEGEDEEGGERKKKKR--RRHPKGEEGS----DDDETENGPKPKKRRPPKAEKK 1005

Query: 367  YQ------DDDLEGNDQDALAEAGLEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQ 407
                       ++G  +     +  +DS  ED+  +      R   + S+S++DE     
Sbjct: 1006 KAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSNSNSDSDEDEQRKKC 1065

[Close]

BLAST of Carg12966 vs. ExPASy Swiss-Prot
Match: Q62018 (RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-30
Identity = 129/435 (29.66%), Postives = 215/435 (49.43%), Query Frame = 0


Query: 7    NLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLA 66
            NLYAANG   +LA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A
Sbjct: 646  NLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISA 705

Query: 67   VKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVA 126
            V+MY+NCLRKFY + + +++LYL+R  ++  + Q+CK+TLL+A H+APS+  L F+  + 
Sbjct: 706  VQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALV 765

Query: 127  MQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCK 186
            +Q+ + S L+  K    EV + V ELE A R FS LS   +     FD     +    C 
Sbjct: 766  LQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDK--MRFDLALAASEARQCS 825

Query: 187  HLLEAAGVHLKAA---EHEEQQVR----QRQELARQVALAEDAR---RKADEQRKFQLER 246
             LL  A  H+  A   + EE+++R    Q +EL RQ  L E      R+ +EQ+K   +R
Sbjct: 826  DLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 885

Query: 247  RKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRER---------SEIDDDEAGDSEKRRR 306
             +  ++ + ++      +  KE+ +     +R ++          + DDD     +K+RR
Sbjct: 886  AQYVEKTKNILMFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPVSKKKKRR 945

Query: 307  KGG----------------KRRKKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESR 366
            KG                 KRR++  KG+   E EE +N     +         + ++  
Sbjct: 946  KGSGSEQEGEEEEGGERKKKRRRRPPKGEEGSEEEETENGPKPKKRRPPR----AEKKKA 1005

Query: 367  SQMNYQDDDLEGNDQDALAEAGLEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRE 407
             +       ++G  +     +  +DS  ED+  +  ++    R + S+S+DDE  N +  
Sbjct: 1006 PKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKI--ADEGHPRNSNSDSDDDERPNRRAS 1065

[Close]

BLAST of Carg12966 vs. ExPASy Swiss-Prot
Match: Q4QR29 (RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.1e-25
Identity = 119/433 (27.48%), Postives = 210/433 (48.50%), Query Frame = 0


Query: 7    NLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLA 66
            NL+AANG   +LA KG    ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A
Sbjct: 646  NLFAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISA 705

Query: 67   VKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVA 126
            V+MY+NCLRKFY + + ++LLYL+R  ++  + Q+CK+ LL+A H+AP++  L F+  + 
Sbjct: 706  VQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPNDTVLMFNVALV 765

Query: 127  MQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCK 186
            +Q+ +   L+  K     V + V ELE A R F+ LS   +     FD     +    C 
Sbjct: 766  LQRLATLVLKDEKSNLKAVLNAVKELELAHRYFNYLSKVGDK--MRFDLALATSEARQCS 825

Query: 187  HLLEAAGVHLKAA---EHEEQQVR----QRQELARQVALAEDAR---RKADEQRKFQLER 246
             LL  A  H+  A   + EE+++R    Q +E+ RQ  L E      R+ +EQ+K   +R
Sbjct: 826  DLLSQAQYHVARARKQDEEEKEMRTKQEQEKEVLRQKLLKEQEEKHLREIEEQKKLLEQR 885

Query: 247  RKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRER--------SEIDDDEAGDSEKRRRK 306
             +  ++ R ++      +  KE+ +     +R ++        ++  D+E    +K+R+K
Sbjct: 886  AQYLEKTRNLLSFTGEMETPKEKKQRGGGGRRSKKNGEFEEFVNDDSDEELAPRKKKRKK 945

Query: 307  GGK---------------RRKKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQ 366
            GG                 +KK ++ K   +   +D+D  ++Q   ++      +E  ++
Sbjct: 946  GGSSSGEQGEGGDEGEGGEKKKKKRRKRPQKAAGSDDD--EEQTPQSKKRQPKKKEKPAK 1005

Query: 367  MNYQDDDLEGNDQDALAEAGLEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESH 407
            +      ++G  +     +  ED   ED+  +     AR     S+S+D    + +R   
Sbjct: 1006 LERTPPSMKGKIKSKAIISSSEDDSDEDKLKIADEGHARD----SDSDDGPRKSQKRVIS 1065

[Close]

BLAST of Carg12966 vs. ExPASy Swiss-Prot
Match: Q6DEU9 (RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis OX=8364 GN=ctr9 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.1e-24
Identity = 119/424 (28.07%), Postives = 209/424 (49.29%), Query Frame = 0


Query: 7    NLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLA 66
            NLYAANG   +LA KG    ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A
Sbjct: 646  NLYAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISA 705

Query: 67   VKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVA 126
            V+MY+NCLRKFY + + ++LLYL+R  ++  + Q+CK+ LL+A H+AP++  L F+  + 
Sbjct: 706  VQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPNDTVLMFNVALV 765

Query: 127  MQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCK 186
            +Q+ +   L+  K     V + V ELE A R F+ LS   +     FD     +    C 
Sbjct: 766  LQRLATLVLKDEKSNLKAVLNAVKELELAHRYFNYLSKVGDK--MRFDLALAASEARQCS 825

Query: 187  HLLEAAGVHLKAA---EHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEE 246
             LL  A  H+  A   + EE+++R +QE  +++ L +   ++ +E+R      +++E+++
Sbjct: 826  DLLSQAQYHVARARKQDEEEKELRAKQEQEKEI-LRQKLIKEQEEKR-----LKEIEEQK 885

Query: 247  RRMMQQEQHFKRVKEQWKST----TPAKRRERSEIDDDEAGDSEKRRRKGGK-------- 306
            + + Q+ Q+ ++ +     T    TP ++++R        G   +R +K G+        
Sbjct: 886  KLLEQRAQYVEKTRNLLNFTGEMETPKEKKQRG----GGGGGGGRRSKKNGEFDEFVNDD 945

Query: 307  -------RRKKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGN 366
                   R+KK +KG     +     +  ++ E   +      +  +   +  DDD +  
Sbjct: 946  SDEDLAPRKKKRKKGGGSSGSGGEQGEGGEEGEGGEKKKKKRRKRPQKGGDGSDDDEDQA 1005

Query: 367  DQDALAEAGLEDSDAEDEAGVPS-SNAARRRATWSESEDD---EPMNMQRESHLQRENSA 405
             Q    +    +  A+ E   PS     + +A  S SEDD   + + +  E H +  NS 
Sbjct: 1006 PQPKKRQPKKREKPAKFERTPPSMKGKIKSKAIISSSEDDSDEDKLKIADEGHGRGSNSD 1052

[Close]

BLAST of Carg12966 vs. ExPASy TrEMBL
Match: A0A6J1HDD6 (protein CTR9 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461792 PE=4 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 3.6e-217
Identity = 408/410 (99.51%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 668  LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 727

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 728  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 787

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 788  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 847

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 848  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 907

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
            DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 908  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 967

Query: 301  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
            SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 968  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 1027

Query: 361  DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
            DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 1028 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 1077

[Close]

BLAST of Carg12966 vs. ExPASy TrEMBL
Match: A0A6J1HBK7 (protein CTR9 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461792 PE=4 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 3.6e-217
Identity = 408/410 (99.51%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
           +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 540 LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 599

Query: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
           GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 600 GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 659

Query: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
           FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 660 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 719

Query: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
           HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 720 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 779

Query: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
           DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 780 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 839

Query: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
           SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 840 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 899

Query: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
           DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 900 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 949

[Close]

BLAST of Carg12966 vs. ExPASy TrEMBL
Match: A0A6J1J9Z0 (protein CTR9 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484885 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216
Identity = 406/410 (99.02%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 668  LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 727

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQ+CKKTLLRAIHLAPSNYTLR
Sbjct: 728  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQECKKTLLRAIHLAPSNYTLR 787

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 788  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 847

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HVGYCKHLLEAAGVHLKAAEHEEQQ+RQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 848  HVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLE 907

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
            DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 908  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 967

Query: 301  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
            SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 968  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 1027

Query: 361  DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
            DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 1028 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 1077

[Close]

BLAST of Carg12966 vs. ExPASy TrEMBL
Match: A0A6J1JJ14 (protein CTR9 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484885 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216
Identity = 406/410 (99.02%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
           +VQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 537 LVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 596

Query: 61  GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
           GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQ+CKKTLLRAIHLAPSNYTLR
Sbjct: 597 GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQECKKTLLRAIHLAPSNYTLR 656

Query: 121 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
           FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 657 FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 716

Query: 181 HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
           HVGYCKHLLEAAGVHLKAAEHEEQQ+RQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 717 HVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLE 776

Query: 241 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
           DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK
Sbjct: 777 DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 836

Query: 301 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
           SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE
Sbjct: 837 SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 896

Query: 361 DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
           DEAGVPSSNAARRRATWSESEDDEPMNMQRES LQRENSAGLEGSDGEIR
Sbjct: 897 DEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR 946

[Close]

BLAST of Carg12966 vs. ExPASy TrEMBL
Match: A0A5A7UMG7 (Protein CTR9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001710 PE=4 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 7.4e-207
Identity = 390/410 (95.12%), Postives = 400/410 (97.56%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            +VQHPANLYAANGA VILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ
Sbjct: 630  LVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 689

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNFSLAVKMYQNCLRKFYYNTDYQILLYL+RTYYEAEQWQDCKKTLLRAIHLAPSNYTLR
Sbjct: 690  GNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 749

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT
Sbjct: 750  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 809

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HVGYCKHLLEAAGVHLKAAEHEEQQ+RQRQELARQVALAEDARRKADEQRKFQLERRKLE
Sbjct: 810  HVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLE 869

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRRKKDRKGK 300
            DEE+RMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAG+SEKRRRKGGKRRKKDRKGK
Sbjct: 870  DEEKRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKDRKGK 929

Query: 301  SHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAGLEDSDAE 360
            SHYETEEADNDMMDDQEL NEDNNI YRESRSQ+N Q DD EGNDQDALAEAGLEDSDAE
Sbjct: 930  SHYETEEADNDMMDDQELYNEDNNIGYRESRSQVNDQVDDFEGNDQDALAEAGLEDSDAE 989

Query: 361  DEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGEIR 411
            DEAG PSSNAARRRATWS+SE+DEP++ QRES LQRENSAGLE SDGEIR
Sbjct: 990  DEAGAPSSNAARRRATWSDSEEDEPIDAQRESRLQRENSAGLEDSDGEIR 1039

[Close]

BLAST of Carg12966 vs. TAIR 10
Match: AT2G06210.1 (binding )

HSP 1 Score: 461.8 bits (1187), Expect = 5.6e-130
Identity = 263/413 (63.68%), Postives = 322/413 (77.97%), Query Frame = 0


Query: 1    MVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQ 60
            + QH +N+YAANG+ ++LAEKGQFD++KD+FTQVQEAASG++F+QMPDVW+NLAHVYFAQ
Sbjct: 667  LTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLAHVYFAQ 726

Query: 61   GNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLAPSNYTLR 120
            GNF+L VKMYQNCLRKF+YNTD QILLYL+RT+YEAEQWQ+CKKTLLRAIHL PSNYT R
Sbjct: 727  GNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTPSNYTFR 786

Query: 121  FDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDT 180
            FD G  MQK S+STLQK KRTADEVRSTVAE ENAVRVF+QLSAAS+LH HGFD KKI T
Sbjct: 787  FDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFDSKKIQT 846

Query: 181  HVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQLERRKLE 240
            HV YC HLLEAA VH +AAE EE Q RQR E+ARQ ALAE+ARRKA+EQRK+QLE+RK E
Sbjct: 847  HVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKYQLEKRKQE 906

Query: 241  DEERRMMQQEQHFKRVKEQWKSTTPA--KRRERSEIDDDEAGDSEKRRRKGGKRRKKDRK 300
            +E RR+ Q+E+ F+R+KEQWKS+TP   KR++R E DD E+  SE+RR+KGGKRRKKD+ 
Sbjct: 907  EELRRLKQEEEKFQRIKEQWKSSTPGSNKRKDRVEDDDGESKPSERRRKKGGKRRKKDKS 966

Query: 301  GKS-HYETEEADNDMMDD-QELDNEDNNISY-RESRSQMNYQDDDLEGNDQDALAEAGLE 360
             ++ HYE +E +   MDD  E+++ED N +Y RE        ++ ++ +  D LA AGLE
Sbjct: 967  SRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEMTTQEAEEPVDDDAHDLLAAAGLE 1026

Query: 361  DSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESHLQRENSAGLEGSDGE 409
            D D +D+  VP+S   RRRA  S  E+ E   +  ESH         E S+GE
Sbjct: 1027 DPDVDDDE-VPTSGVRRRRALSSSDEEGE---LMEESHPNSSPQKEKEESNGE 1075

The following BLAST results are available for this feature:

BLAST of Carg12966 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023691.1	3.9e-218	100.00	Protein CTR9-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961215.1	7.4e-217	99.51	protein CTR9 homolog isoform X2 [Cucurbita moschata]	[more]
KAG6590030.1	7.4e-217	99.51	Protein CTR9-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961214.1	7.4e-217	99.51	protein CTR9 homolog isoform X1 [Cucurbita moschata]	[more]
XP_022987293.1	2.8e-216	99.02	protein CTR9 homolog isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg12966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5X0I6	7.8e-129	63.68	Protein CTR9 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP6 PE=1 SV=1	[more]
Q6PD62	1.3e-30	30.21	RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 P...	[more]
Q62018	2.2e-30	29.66	RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 ...	[more]
Q4QR29	8.1e-25	27.48	RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9...	[more]
Q6DEU9	3.1e-24	28.07	RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis OX=8364 GN=...	[more]

BLAST of Carg12966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDD6	3.6e-217	99.51	protein CTR9 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461792 PE...	[more]
A0A6J1HBK7	3.6e-217	99.51	protein CTR9 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461792 PE...	[more]
A0A6J1J9Z0	1.4e-216	99.02	protein CTR9 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484885 PE=4...	[more]
A0A6J1JJ14	1.4e-216	99.02	protein CTR9 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484885 PE=4...	[more]
A0A5A7UMG7	7.4e-207	95.12	Protein CTR9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Carg12966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06210.1	5.6e-130	63.68	binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..155
None	No IPR available	COILS	Coil	Coil	coord: 209..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..410
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 83..116 e-value: 13.0 score: 14.0 coord: 47..80 e-value: 2.4E-4 score: 30.4
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 47..80 score: 8.4374
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..171 e-value: 1.0E-15 score: 59.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 4..128
IPR031101	RNA polymerase-associated protein Ctr9	PANTHER	PTHR14027	RNA POLYMERASE-ASSOCIATED PROTEIN CTR9	coord: 3..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12966-RA	Carg12966-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016570	histone modification
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005515	protein binding