Carg12946 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12946
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NGR2
Location	Carg_Chr10: 3617500 .. 3619530 (+)
RNA-Seq Expression	Carg12946
Synteny	Carg12946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTATCAAAGTTGATCGAAAAGACGAGAGATTGAATACTTATATGAGGGGAAAAGACGTTGTAATAGGGAGACAAAGATGTGACCAACCCGAGAGAGAGAAAAAGAGAGTCGACTTTTTGGAACTTGAAACAGTGGCAGCTAGTAGTTTGGTTGTGGAATTTCTCACATTTCTCTTCACTATATAAAGTGTTTTGCACTCTCATCTTGCCTTGGTGAGGTATAGTTCTCTAGACCTTGCTCTATCTGGCCTTATCGATAAGAATTCGAACTCGAACTAGAGGCCTCGAAGGGGATAAAGAAGAGGGTGTATCGCTGTTGCAAACTCGACGTTTGACAGATGAGGGTAAGTTAATGCAAGAGTGTTTTGTCATGATTTTGTATTCGGAAGTTGGTGTTTACTCTCCGTGATTAATTACGACTCGTTTTTGTTTGCAGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGGAAGACTATATTCTTCTTTTATTTTCGTTTCTATTTACAGAGTGAACTCGTTTTGATGATGATCTTTTAGACGATTTGAGTGCAAATAGCTTGAATTTCTTGCTCAAACAGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGGTAAAATCAAGAACTCAAATTCTCTGATTACTGTTCTGGTGGGATCAGTGTTGATGACTTTTTGTAGTCAAATATTGATAAAACTGTTTCTGAATCAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAGTATGAACAATATAATCAGTATCAACTTTCTAGTTCCATCAGGTACACAAAATTCTGACTGTTTGTTTCCATTTCTTGTGCAGATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGATTGTTTGTTCAAATGTTTAGCTATTGTTCTTATCTAACAGCTTGGAGGAATTGAAACTGAGCTCAAATTTATCCTTTAAGAAACACTCTCGAATAGCTGGGGATGTTCGTCACAATTACAGCGTCTGTTATATAAACTCACTCAGAAAAGCAAAAGCTTTGTCTTAGAGAGCCGAATCATTGTCTTGTAGCATGAAATCAAGACCAGAGAAGCCCACAAGAACTGTGGAAATGACCAATATTCTTACACTTTAGCTCACAAAAAGAGAGAGGTAGGGTCATTTTCACTGGTTCGTTTTAAACTGGACACGTTTCTTTCTGTTACTCGATCATATTTTTTGGAGATGTGAGTTTGCGAACATTTGGCTCCATTTAAGTTTATCATCGGGATATCGGTGATATGATCGGAGAGTTCCTCCT

mRNA sequence

TTTTTTATCAAAGTTGATCGAAAAGACGAGAGATTGAATACTTATATGAGGGGAAAAGACGTTGTAATAGGGAGACAAAGATGTGACCAACCCGAGAGAGAGAAAAAGAGAGTCGACTTTTTGGAACTTGAAACAGTGGCAGCTAGTAGTTTGGTTGTGGAATTTCTCACATTTCTCTTCACTATATAAAGTGTTTTGCACTCTCATCTTGCCTTGGTGAGGTATAGTTCTCTAGACCTTGCTCTATCTGGCCTTATCGATAAGAATTCGAACTCGAACTAGAGGCCTCGAAGGGGATAAAGAAGAGGGTGTATCGCTGTTGCAAACTCGACGTTTGACAGATGAGGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGATTGTTTGTTCAAATGTTTAGCTATTGTTCTTATCTAACAGCTTGGAGGAATTGAAACTGAGCTCAAATTTATCCTTTAAGAAACACTCTCGAATAGCTGGGGATGTTCGTCACAATTACAGCGTCTGTTATATAAACTCACTCAGAAAAGCAAAAGCTTTGTCTTAGAGAGCCGAATCATTGTCTTGTAGCATGAAATCAAGACCAGAGAAGCCCACAAGAACTGTGGAAATGACCAATATTCTTACACTTTAGCTCACAAAAAGAGAGAGGTAGGGTCATTTTCACTGGTTCGTTTTAAACTGGACACGTTTCTTTCTGTTACTCGATCATATTTTTTGGAGATGTGAGTTTGCGAACATTTGGCTCCATTTAAGTTTATCATCGGGATATCGGTGATATGATCGGAGAGTTCCTCCT

Coding sequence (CDS)

ATGAGGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGA

Protein sequence

MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSECQYCFRNLRSYHCQRKDHKTSLSCLVA

Homology

[Close]

BLAST of Carg12946 vs. NCBI nr
Match: KAG7023711.1 (hypothetical protein SDJN02_14737 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSECQYCFRNLRSYHCQRKDHKTSLSCLVA 294
           ENENENENGKNDKKCDGSKWVQTDSECQYCFRNLRSYHCQRKDHKTSLSCLVA
Sbjct: 241 ENENENENGKNDKKCDGSKWVQTDSECQYCFRNLRSYHCQRKDHKTSLSCLVA 293

[Close]

BLAST of Carg12946 vs. NCBI nr
Match: KAG6590045.1 (von Willebrand factor A domain-containing protein 5B1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 2    RILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQAR 61
            +ILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQAR
Sbjct: 748  KILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQAR 807

Query: 62   PKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIFL 121
            PKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIFL
Sbjct: 808  PKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIFL 867

Query: 122  TRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIFV 181
            TRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIFV
Sbjct: 868  TRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIFV 927

Query: 182  CGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDE 241
            CGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDE
Sbjct: 928  CGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDE 987

Query: 242  NENENENGKNDKKCDGSKWVQTDSE 267
            NENENENGKNDKKCDGSKWVQTDSE
Sbjct: 988  NENENENGKNDKKCDGSKWVQTDSE 1012

[Close]

BLAST of Carg12946 vs. NCBI nr
Match: XP_022960800.1 (uncharacterized protein LOC111461494 isoform X1 [Cucurbita moschata])

HSP 1 Score: 513.8 bits (1322), Expect = 9.5e-142
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK 
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK- 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSECQY 270
             ENENENGKNDKKCDGSKWVQTDSECQY
Sbjct: 241 -YENENENGKNDKKCDGSKWVQTDSECQY 267

[Close]

BLAST of Carg12946 vs. NCBI nr
Match: XP_022960801.1 (uncharacterized protein LOC111461494 isoform X2 [Cucurbita moschata])

HSP 1 Score: 505.8 bits (1301), Expect = 2.6e-139
Identity = 261/266 (98.12%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK 
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK- 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSE 267
             ENENENGKNDKKCDGSKWVQTDSE
Sbjct: 241 -YENENENGKNDKKCDGSKWVQTDSE 264

[Close]

BLAST of Carg12946 vs. NCBI nr
Match: XP_023516153.1 (uncharacterized protein LOC111780100 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.7 bits (1293), Expect = 2.2e-138
Identity = 258/269 (95.91%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTK EMVHRTLPEEFS+WPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKDEMVHRTLPEEFSNWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL+QHLQDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKSSQENPSSSLQQHLQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYD+LIKKSDSFQHVILSKSKDAG GAHDTTVIGKR LSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDKLIKKSDSFQHVILSKSKDAGPGAHDTTVIGKRNLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSECQY 270
           ENENENE  KNDKKCDGSKWVQTDSECQY
Sbjct: 241 ENENENE--KNDKKCDGSKWVQTDSECQY 267

[Close]

BLAST of Carg12946 vs. ExPASy Swiss-Prot
Match: A0A072TLV8 (Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN=NGR PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.9e-32
Identity = 114/277 (41.16%), Postives = 153/277 (55.23%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDN---L 60
           M+  +WMQ K   G K   R ++ ST          EEFS WPH LLAIGTFG++N    
Sbjct: 1   MKFFNWMQNKL--GGKQENRKSNTSTSTTYAKPEPREEFSDWPHSLLAIGTFGNNNEITQ 60

Query: 61  NQARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQ---- 120
           N       QE+PSSS  + + D TPEE+  L KE   LL     +  P++E E+S+    
Sbjct: 61  NIENQNTQQEDPSSS--EEVPDFTPEEIGKLQKELTRLL-----RRKPNVEKEISELPLD 120

Query: 121 ---HCPSNIFLTRSFESE-TSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGK 180
              +CPS++ + R   +   S++    DE I+K+ S   VIL K KD          IGK
Sbjct: 121 RFLNCPSSLEVDRRISNALCSESGGDKDEDIEKTLS---VILDKCKDI-CAEKSKKSIGK 180

Query: 181 RTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMK 240
           +++SFLLKK+FVC  G AP    P  R    ES+MEK+LRT+L KK+Y QN N R   +K
Sbjct: 181 KSISFLLKKMFVCRSGFAP---TPSLRDTLQESRMEKLLRTMLHKKLYTQN-NSRAPVLK 240

Query: 241 KYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
           K L+ K   K  NE+E E    ++  +GSKWV+TDSE
Sbjct: 241 KCLENKKSIKKRNEDEAE----ERIDEGSKWVKTDSE 256

[Close]

BLAST of Carg12946 vs. ExPASy Swiss-Prot
Match: A0A251PW43 (Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 105/272 (38.60%), Postives = 156/272 (57.35%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNL--N 60
           M++  WMQ  K NG++G+++  +         +   EEFS WPH LLAIGTFG+++L  N
Sbjct: 1   MKLFGWMQ-NKLNGKQGNKKPNTVPITTHPAKQEPREEFSDWPHGLLAIGTFGNNDLKEN 60

Query: 61  QARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDE--HLEQSGPSLEFEVSQHCP 120
            A  +  QE+P+SS E+ L + TPEE+  LHKE   LL    ++E+    L  +   +CP
Sbjct: 61  AAESQDIQEDPTSS-EEILDNFTPEEVGKLHKELTKLLTRKPNIEKEIADLPLDRFLNCP 120

Query: 121 SNIFLTRSFESETSKNEL--FYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSF 180
           S++ + R   +    +      DE I+K+ S   VIL + K+   G  +   IGK+++SF
Sbjct: 121 SSLEVDRRNSNALCSDSADDHKDEDIEKTIS---VILGRCKEI-CGDKNKKAIGKKSISF 180

Query: 181 LLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKR 240
           LLKK+FVC  G AP    P  R    ES+MEK+LR +L KKI     + R +SMKKYL+ 
Sbjct: 181 LLKKMFVCRSGFAP---QPSLRDTLQESRMEKLLRVMLNKKIINPQGSSRAASMKKYLED 240

Query: 241 KNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
           + +   + E+  E+   +K  +G KWV+TDSE
Sbjct: 241 R-QIPTKKESNTEDDTKEKINNGCKWVKTDSE 262

[Close]

BLAST of Carg12946 vs. ExPASy Swiss-Prot
Match: Q58G53 (Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-22
Identity = 101/297 (34.01%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFG--DDNLN 60
           M+   WMQ  K NG     RT+++S     V +   EEFS WPH LLAIGTFG   ++++
Sbjct: 1   MKFFGWMQ-NKLNG--DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVS 60

Query: 61  QARPK----------------RSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQ 120
           +   K                  +E PSSS+  +L+D TPEE+  L KE   LL    ++
Sbjct: 61  ENESKNVHEEIEAEKKCTAQSEQEEEPSSSV--NLEDFTPEEVGKLQKELMKLLSRTKKR 120

Query: 121 SG-------PSLEFEVSQHCPSNIFLTRSFESETSKNELFYDELIKKSDSFQ--HVILSK 180
                     +L  +   +CPS++ + R   +  S   +   E  K+ D  +  +VIL +
Sbjct: 121 KSDVNRELMKNLPLDRFLNCPSSLEVDRRISNALSA-VVDSSEENKEEDMERTINVILGR 180

Query: 181 SKDAGTGAHDTTV---IGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRT 240
            K+    + +      I K ++S+L KKIFVC  GI+ A  +P  R    ES+MEK+L+ 
Sbjct: 181 CKEISIESKNNKKKRDISKNSVSYLFKKIFVCADGISTAP-SPSLRDTLQESRMEKLLKM 240

Query: 241 ILQKKIYPQNSNVRTS-SMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
           +L KKI  Q S+  TS + K+YL+ K KQ      E E  +     DG KWV+TDS+
Sbjct: 241 MLHKKINAQASSKPTSLTTKRYLQDK-KQLSLKSEEEETSERRSSSDGYKWVKTDSD 289

[Close]

BLAST of Carg12946 vs. ExPASy Swiss-Prot
Match: Q5XVG3 (Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-20
Identity = 96/297 (32.32%), Postives = 147/297 (49.49%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGD------ 60
           M+   WMQ K    ++ + R + +S           EEF+ WPH LLAIGTFG+      
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSASSHHPR----EEFNDWPHGLLAIGTFGNKKQTPQ 60

Query: 61  ------------DNLN-QARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLE 120
                        NL+ + R  +  +   SS +   +D TPEE+  L KE   LL    +
Sbjct: 61  TLDQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSK 120

Query: 121 QSGPSLEFEVSQ-------HCPSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKS 180
           +    +  E++        +CPS++ + R   +     +   +E I+++ S   VIL + 
Sbjct: 121 KRKSDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEK---EEDIERTIS---VILGRC 180

Query: 181 KDAGTGAHDTTVIGKRTL-----SFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLR 240
           K   T + + T   KR L     S LLKK+FVC  G +P    P  R    E++MEK+LR
Sbjct: 181 KAISTESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGFSPVP-RPILRDTFQETRMEKLLR 240

Query: 241 TILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
            +L KK+  Q S+ +TS+ KKYL  ++KQ+   +NE E G++    DG KWV+TDS+
Sbjct: 241 MMLHKKVNTQASSKQTST-KKYL--QDKQQLSLKNEEEEGRSSN--DGGKWVKTDSD 281

[Close]

BLAST of Carg12946 vs. ExPASy Swiss-Prot
Match: Q69P88 (Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.2e-19
Identity = 95/271 (35.06%), Postives = 139/271 (51.29%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTK--GEMVHRTLPEEFSSWPHVLLAIGTFGDDNLN 60
           M+I SW+   K +G++ + R  +NS+      V     +EFS WP  LLAIGTFG+  + 
Sbjct: 1   MKIFSWV-ANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQIE 60

Query: 61  QARPKRSQENPSSSLEQHLQD---LTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHC 120
           +     +Q   SS   Q +QD    T EE++ + KEF  LL    +            H 
Sbjct: 61  EV----AQVENSSDNVQSVQDTVKFTEEEVDKIRKEFETLLAIKDQAEAQ------RSHD 120

Query: 121 PSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFL 180
              + L +  + E   NE    +LI K      +I+SKSK++  G    T+  +   S L
Sbjct: 121 DDQVGLQKRADGE--DNEKHIRQLINK-----RIIVSKSKNS-LGKKGNTLKPRSVASLL 180

Query: 181 LKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRK 240
             K+F+C GG    +V P PR    +S+MEK+L+ ILQKKI+PQNS+  T   K++L  K
Sbjct: 181 --KLFMCKGGF--TSVVPEPRNTFPQSRMEKLLKAILQKKIHPQNSS--TLVAKRHLDWK 240

Query: 241 NKQKDENENENENGKNDKKCDGSKWVQTDSE 267
             + + NE   E+   D   DG+KWV+TDSE
Sbjct: 241 PDETEINEC-LEDALRDLDDDGAKWVKTDSE 245

[Close]

BLAST of Carg12946 vs. ExPASy TrEMBL
Match: A0A6J1HA51 (uncharacterized protein LOC111461494 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461494 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.6e-142
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK 
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK- 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSECQY 270
             ENENENGKNDKKCDGSKWVQTDSECQY
Sbjct: 241 -YENENENGKNDKKCDGSKWVQTDSECQY 267

[Close]

BLAST of Carg12946 vs. ExPASy TrEMBL
Match: A0A6J1H8L8 (uncharacterized protein LOC111461494 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461494 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 261/266 (98.12%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK 
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQK- 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSE 267
             ENENENGKNDKKCDGSKWVQTDSE
Sbjct: 241 -YENENENGKNDKKCDGSKWVQTDSE 264

[Close]

BLAST of Carg12946 vs. ExPASy TrEMBL
Match: A0A6J1JGI7 (uncharacterized protein LOC111484913 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484913 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 8.1e-131
Identity = 247/269 (91.82%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKK NGRK S+R TSNSTK EMVHRTLPEEFSSWPHVLLAIGTFGD+NLNQA
Sbjct: 1   MRILSWMQGKKANGRKESKR-TSNSTKDEMVHRTLPEEFSSWPHVLLAIGTFGDENLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL QH+QDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSN+ 
Sbjct: 61  RPKSSQENPSSSL-QHVQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNML 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESET+KNE FYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETTKNEPFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVR SSMKKYL+RKNKQKD
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRISSMKKYLRRKNKQKD 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSECQY 270
           EN+NE EN KNDK C+G+KWVQTDSECQY
Sbjct: 241 ENKNEKENEKNDKTCNGNKWVQTDSECQY 267

[Close]

BLAST of Carg12946 vs. ExPASy TrEMBL
Match: A0A6J1JDV1 (uncharacterized protein LOC111484913 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484913 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 244/266 (91.73%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKK NGRK S+R TSNSTK EMVHRTLPEEFSSWPHVLLAIGTFGD+NLNQA
Sbjct: 1   MRILSWMQGKKANGRKESKR-TSNSTKDEMVHRTLPEEFSSWPHVLLAIGTFGDENLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL QH+QDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSN+ 
Sbjct: 61  RPKSSQENPSSSL-QHVQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNML 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESET+KNE FYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETTKNEPFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKD 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVR SSMKKYL+RKNKQKD
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRISSMKKYLRRKNKQKD 240

Query: 241 ENENENENGKNDKKCDGSKWVQTDSE 267
           EN+NE EN KNDK C+G+KWVQTDSE
Sbjct: 241 ENKNEKENEKNDKTCNGNKWVQTDSE 264

[Close]

BLAST of Carg12946 vs. ExPASy TrEMBL
Match: A0A0A0LWQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597130 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 5.0e-104
Identity = 204/268 (76.12%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRIL+WMQGKK +GRKGS+RTTSNS   E+VH+T PEEFS+W HVLLAIGTFGD+NLN+A
Sbjct: 1   MRILNWMQGKKPSGRKGSKRTTSNSINDEIVHKTRPEEFSNWSHVLLAIGTFGDENLNEA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQEN SSSL+QHL+DLTPEELNIL KEFNLLL EHL+QSGP+LEFEVS+HCPSNIF
Sbjct: 61  RPKRSQENSSSSLQQHLKDLTPEELNILQKEFNLLLAEHLKQSGPTLEFEVSKHCPSNIF 120

Query: 121 LTR--SFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKK 180
           L R  +F SET+K EL Y+ELIKKS+ FQHVILSK KD G  A+DT +IGKRTLS LLKK
Sbjct: 121 LNRQLTFGSETTKKELCYEELIKKSNIFQHVILSKGKDVGVDANDTAIIGKRTLSLLLKK 180

Query: 181 IFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQ 240
           IFVCGGG AP  V  PP    LESKMEK+LRTILQKKIYP++SNVRTSS KKYL++KNKQ
Sbjct: 181 IFVCGGGTAPPAVVTPPLRPALESKMEKILRTILQKKIYPRSSNVRTSSKKKYLRKKNKQ 240

Query: 241 KDENENENENGKNDKKCDGSKWVQTDSE 267
           +DENE+E    KNDK  DGSKWVQTDSE
Sbjct: 241 RDENEDE----KNDKTSDGSKWVQTDSE 264

[Close]

BLAST of Carg12946 vs. TAIR 10
Match: AT1G17400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-23
Identity = 101/297 (34.01%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFG--DDNLN 60
           M+   WMQ  K NG     RT+++S     V +   EEFS WPH LLAIGTFG   ++++
Sbjct: 1   MKFFGWMQ-NKLNG--DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVS 60

Query: 61  QARPK----------------RSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQ 120
           +   K                  +E PSSS+  +L+D TPEE+  L KE   LL    ++
Sbjct: 61  ENESKNVHEEIEAEKKCTAQSEQEEEPSSSV--NLEDFTPEEVGKLQKELMKLLSRTKKR 120

Query: 121 SG-------PSLEFEVSQHCPSNIFLTRSFESETSKNELFYDELIKKSDSFQ--HVILSK 180
                     +L  +   +CPS++ + R   +  S   +   E  K+ D  +  +VIL +
Sbjct: 121 KSDVNRELMKNLPLDRFLNCPSSLEVDRRISNALSA-VVDSSEENKEEDMERTINVILGR 180

Query: 181 SKDAGTGAHDTTV---IGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRT 240
            K+    + +      I K ++S+L KKIFVC  GI+ A  +P  R    ES+MEK+L+ 
Sbjct: 181 CKEISIESKNNKKKRDISKNSVSYLFKKIFVCADGISTAP-SPSLRDTLQESRMEKLLKM 240

Query: 241 ILQKKIYPQNSNVRTS-SMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
           +L KKI  Q S+  TS + K+YL+ K KQ      E E  +     DG KWV+TDS+
Sbjct: 241 MLHKKINAQASSKPTSLTTKRYLQDK-KQLSLKSEEEETSERRSSSDGYKWVKTDSD 289

[Close]

BLAST of Carg12946 vs. TAIR 10
Match: AT1G72490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 6.8e-21
Identity = 96/297 (32.32%), Postives = 147/297 (49.49%), Query Frame = 0


Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGD------ 60
           M+   WMQ K    ++ + R + +S           EEF+ WPH LLAIGTFG+      
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSASSHHPR----EEFNDWPHGLLAIGTFGNKKQTPQ 60

Query: 61  ------------DNLN-QARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLE 120
                        NL+ + R  +  +   SS +   +D TPEE+  L KE   LL    +
Sbjct: 61  TLDQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSK 120

Query: 121 QSGPSLEFEVSQ-------HCPSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKS 180
           +    +  E++        +CPS++ + R   +     +   +E I+++ S   VIL + 
Sbjct: 121 KRKSDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEK---EEDIERTIS---VILGRC 180

Query: 181 KDAGTGAHDTTVIGKRTL-----SFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLR 240
           K   T + + T   KR L     S LLKK+FVC  G +P    P  R    E++MEK+LR
Sbjct: 181 KAISTESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGFSPVP-RPILRDTFQETRMEKLLR 240

Query: 241 TILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
            +L KK+  Q S+ +TS+ KKYL  ++KQ+   +NE E G++    DG KWV+TDS+
Sbjct: 241 MMLHKKVNTQASSKQTST-KKYL--QDKQQLSLKNEEEEGRSSN--DGGKWVKTDSD 281

[Close]

BLAST of Carg12946 vs. TAIR 10
Match: AT1G19115.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-13
Identity = 53/122 (43.44%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 154 SKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITL-------ESKMEK 213
           SKD      D T+  K++LSFLLKK+FVC  G        PP ++ L        ++MEK
Sbjct: 69  SKDITPVNTDVTIGKKKSLSFLLKKMFVCTSGF-----KTPPPLLDLSRGDSLHNTRMEK 128

Query: 214 MLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 269
           MLRTIL KKI+PQ SN   S  KKYL+  +K  DE  +           D +KWV+TDSE
Sbjct: 129 MLRTILNKKIHPQRSN---SIAKKYLESNHKIMDEARS---------SVDANKWVKTDSE 173

[Close]

BLAST of Carg12946 vs. TAIR 10
Match: AT1G19115.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-13
Identity = 53/121 (43.80%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 154 SKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITL-------ESKMEK 213
           SKD      D T+  K++LSFLLKK+FVC  G        PP ++ L        ++MEK
Sbjct: 69  SKDITPVNTDVTIGKKKSLSFLLKKMFVCTSGF-----KTPPPLLDLSRGDSLHNTRMEK 128

Query: 214 MLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 268
           MLRTIL KKI+PQ SN   S  KKYL+  +K  DE  +           D +KWV+TDSE
Sbjct: 129 MLRTILNKKIHPQRSN---SIAKKYLESNHKIMDEARS---------SVDANKWVKTDSE 172

[Close]

BLAST of Carg12946 vs. TAIR 10
Match: AT1G19115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-12
Identity = 52/120 (43.33%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 154 SKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITL-------ESKMEK 213
           SKD      D T+  K++LSFLLKK+FVC  G        PP ++ L        ++MEK
Sbjct: 69  SKDITPVNTDVTIGKKKSLSFLLKKMFVCTSGF-----KTPPPLLDLSRGDSLHNTRMEK 128

Query: 214 MLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSE 267
           MLRTIL KKI+PQ SN   S  KKYL+  +K  DE  +           D +KWV+TDSE
Sbjct: 129 MLRTILNKKIHPQRSN---SIAKKYLESNHKIMDEARS---------SVDANKWVKTDSE 171

The following BLAST results are available for this feature:

BLAST of Carg12946 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023711.1	1.1e-161	100.00	hypothetical protein SDJN02_14737 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590045.1	1.1e-142	99.62	von Willebrand factor A domain-containing protein 5B1, partial [Cucurbita argyro...	[more]
XP_022960800.1	9.5e-142	98.14	uncharacterized protein LOC111461494 isoform X1 [Cucurbita moschata]	[more]
XP_022960801.1	2.6e-139	98.12	uncharacterized protein LOC111461494 isoform X2 [Cucurbita moschata]	[more]
XP_023516153.1	2.2e-138	95.91	uncharacterized protein LOC111780100 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12946 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A072TLV8	2.9e-32	41.16	Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN...	[more]
A0A251PW43	3.2e-31	38.60	Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1	[more]
Q58G53	2.1e-22	34.01	Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1	[more]
Q5XVG3	9.5e-20	32.32	Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1	[more]
Q69P88	6.2e-19	35.06	Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 S...	[more]

BLAST of Carg12946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA51	4.6e-142	98.14	uncharacterized protein LOC111461494 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H8L8	1.2e-139	98.12	uncharacterized protein LOC111461494 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JGI7	8.1e-131	91.82	uncharacterized protein LOC111484913 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JDV1	1.7e-128	91.73	uncharacterized protein LOC111484913 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LWQ1	5.0e-104	76.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597130 PE=3 SV=1	[more]

BLAST of Carg12946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17400.1	1.5e-23	34.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G72490.1	6.8e-21	32.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19115.3	3.0e-13	43.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.2	5.2e-13	43.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.1	5.8e-12	43.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 228..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR34045:SF11	SUBFAMILY NOT NAMED	coord: 1..268
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12946-RA	Carg12946-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0040008	regulation of growth