Carg12873 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12873
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pre-mRNA-splicing factor like
Location	Carg_Chr09: 5647640 .. 5650260 (-)
RNA-Seq Expression	Carg12873
Synteny	Carg12873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGGTAATCTTTGTTCTTTGATTCTTCAATCTCTTTTCTCCTATCGGAAATGGAATTTGTTCTTCCATTGAGTTACCGTGGATTGAAAATTTTGGAATCTGCAATGGAATTTCGGGAATGTGATTATGAACCCTAAAGTTGAATGGTAGGTTTGTTTTTGTGTTTGTCTTCGGATCGATTAAACCTCCTTTTATTGGAAGATTGTGCTTGAATTTTATCTACGGATTTTGTCCCAATGTTGCTGATTGTTTGGTAATCTATGCTGAAGATTTCGTTGTTTTGTTTTCTGGATTTGGATTGTTCTTCGTAGTGATGGAAAATTTGTTTCCCCTGTTTCTGAGGCTTTGCTTTTATTGTTTCCACTTTCTTCTTTTACACGGCATGCTGAATACAAAAACTTGAGGTTTGGTTGAGTGAATCATAAGATGTTAAGATTGATCAAAAGAGTGCCCAAACTGAGAACAAAAGTAGTCTAGTTTATCTCAGCTACAAACCTATACACATATTTCGAGAACACAAGTTAATAATTGAAGGATACTGATGTTGATCCTTTGAGTTTCAGTCTTGCGACCCTAATCCCCAGGTGGAGGTATTGGAATTGGAAAAACTCGACCGTGGAGATAAGAAAACCTGTCGGGAAGGATTTGATGAAAAACTTCGTTTAAACAACCTAAAGATTGCAGGAATAATCCGGTCTTATCGCAGTCCATATCCTCCACACTAATTCTTTAGCACAGGTTCAATTTGATTAAGTTAAAAGCCTAAATTTGAATCACTTAGCTGCTGAGTTTCATAAGAGAAATCATTTCTGCTCGAAAAGTATGTCATTCTCTGTCTGTGGTGGTTTCCTCATGAAAATGGAAAACGATGGATAGTTCTTGATGATATCTTTGCAAGGTACTTCGTGGAATGGTAGTGTTTTCCATTCATTATGTGTAGCTGTTAGCTTGGAAATGGTTAATTCAATAGCATTAGATTCTACTTTCCAACTTTTTTCTTAGATGATAAAACTTACAAAAGAAAAAGGGAGGAGAGTCAAGTCCTAGCGTGTAGGAGACTATGAAAAGTTCCTCTCATTGACCATAAGCATACAAAGAAAAAGAAAGAGTTGTCAAAGTTAGTGTAACCACCGCTAGCAGATTTTGTCTTCTTTGGATTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTAAAACGTGTTTTCTACGGAGAGGTTTCCACACCTTTATAAAAAATGTTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCACCCCCTTAAGGCTTAGCCTCCTTGTTGGCACGTCGCTCGGTGTCGGGCTCTAATACCATTTGTAATAGTCCAAGCCCACTGTAAGCAGATATTGTCTTTTCTGGATTTTCTCCTTAGGGTTTTTAAAATGCATCTAATTGAGAGAGGTTTCCACGCCCTTATAAAGAATGTTTCGTTCTCCTCGCCAACTGACTGATGTGGGATCTCACAAATAAGATCTGTGACCCGTGGCTTGATAGTAGAGGAGGTCCAACATTATCTGTTACTCTTTTGCGTTTGTTGTTTTTATGCTTCAGATCCTTTGGGTGCCTTTTGGGTGCCTGGATTATGATGTCGTTCTTGAACTATGAATATATGTACTCAGTGAGCTGTTTCTGATTAAATCTTCTGTACTGCCTAAACTTATAATCATAGAACCTTACGCTATCACTTAAGCGACGGGAATTCATATTGATGATATCATTACATTTATTTGAACGGTCTATCCTAACTAGATATTTGCTTGTCAAATTACTTATGTCTAAGGTACAGAATCGAAGTAGTATTTAAACCATGAAAATTTCTTGATTGTCACAAATGGTTTGTGAACAATCCCTATCATTGTGGGGTACTACAGTAGATGCTTGTGAGCAAGTTACTGTCATTTACATACCCTGTCTCAGCTGATTTTTCAGTAGCTTTCTCCAAGTGCTTCCTCAAGAATATACAAACACATTATTGTTGAAATGATAATCTTCATGAAGCATGGCACTGACTGGTGTGTGGTATCTTTTTGCAACAGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAGAAGTAGAGATCCAAGACCCTCCTCCAAAGGTAGCTATCAGTAACTCTTAATATAAATGTCAACAAAAACCACCTAGGAGATTGCCCAAAGATTTAGCAGATAAGCTGTAAATATCCTATGAAAATGAAATATCGACATCGAATATTATAGAGTCAGATGATCATTCTTCATGGCTAGGTTAAAGAAGAGATGACGATCTATCTTGGCCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAAAAATTGAAGGAAGCAGATCGGAGGACCACGACGGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGTTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA

mRNA sequence

ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAGAAGTAGAGATCCAAGACCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGCCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAAAAATTGAAGGAAGCAGATCGGAGGACCACGACGGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGTTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA

Coding sequence (CDS)

ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAGAAGTAGAGATCCAAGACCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGCCCACATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAAAAATTGAAGGAAGCAGATCGGAGGACCACGACGGGACGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGTTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA

Protein sequence

MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK

Homology

[Close]

BLAST of Carg12873 vs. NCBI nr
Match: XP_022936022.1 (uncharacterized protein LOC111442743 [Cucurbita moschata] >KAG7024971.1 hypothetical protein SDJN02_13791, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY
Sbjct: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 139

[Close]

BLAST of Carg12873 vs. NCBI nr
Match: KAG6592094.1 (hypothetical protein SDJN03_14440, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.3 bits (713), Expect = 1.9e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPP+EEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY
Sbjct: 88  MDPSSVHKAPPIEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 147

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 148 LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 207

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 208 KGSSRDWLDPHCHEAQFEK 226

[Close]

BLAST of Carg12873 vs. NCBI nr
Match: XP_022975858.1 (uncharacterized protein LOC111476432 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIY
Sbjct: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 139

[Close]

BLAST of Carg12873 vs. NCBI nr
Match: XP_023536283.1 (uncharacterized protein LOC111797504 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 4.6e-70
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIY
Sbjct: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDL+PANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLSPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 139

[Close]

BLAST of Carg12873 vs. NCBI nr
Match: XP_038898121.1 (uncharacterized protein LOC120085905 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHK PPVEEDEWDTDGFVIPSLGI  EET+QTK  SP+VEIQ+PPPKVKEE TIY
Sbjct: 1   MDPSSVHKVPPVEEDEWDTDGFVIPSLGI--EETNQTKAGSPKVEIQEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM 
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMA 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 137

[Close]

BLAST of Carg12873 vs. ExPASy TrEMBL
Match: A0A6J1F787 (uncharacterized protein LOC111442743 OS=Cucurbita moschata OX=3662 GN=LOC111442743 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.9e-72
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY
Sbjct: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 139

[Close]

BLAST of Carg12873 vs. ExPASy TrEMBL
Match: A0A6J1IKG2 (uncharacterized protein LOC111476432 OS=Cucurbita maxima OX=3661 GN=LOC111476432 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIY
Sbjct: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 139

[Close]

BLAST of Carg12873 vs. ExPASy TrEMBL
Match: A0A0A0K8B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G099280 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 124/139 (89.21%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSV KAPP EEDEWDTDGFVIPSLGI  EE DQT+V SP+VEI++PPPKVKEE TIY
Sbjct: 1   MDPSSVRKAPPAEEDEWDTDGFVIPSLGI--EEADQTRVGSPKVEIEEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM 
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMA 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEA+FEK
Sbjct: 121 KGSSRDWLDPHCHEAEFEK 137

[Close]

BLAST of Carg12873 vs. ExPASy TrEMBL
Match: A0A6J1CE06 (uncharacterized protein LOC111010385 OS=Momordica charantia OX=3673 GN=LOC111010385 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 126/139 (90.65%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSV K PPVEEDEWDTDGFVIPSLGI  EETDQTKV SPEVEI +PPPK KEE TIY
Sbjct: 1   MDPSSVQKPPPVEEDEWDTDGFVIPSLGI--EETDQTKVGSPEVEIYEPPPKAKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLN  NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM 
Sbjct: 61  LGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMA 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEAQFEK
Sbjct: 121 KGSSRDWLDPHCHEAQFEK 137

[Close]

BLAST of Carg12873 vs. ExPASy TrEMBL
Match: A0A1S3CJS1 (uncharacterized protein LOC103501243 OS=Cucumis melo OX=3656 GN=LOC103501243 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 123/139 (88.49%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 1   MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDPPPKVKEEMTIY 60
           MDPSSV KAPP EEDEWDTDGFVIPSLGI  EETDQT+V SP+VEI++PPPKVKEE TIY
Sbjct: 1   MDPSSVRKAPPAEEDEWDTDGFVIPSLGI--EETDQTRVGSPKVEIEEPPPKVKEETTIY 60

Query: 61  LGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMT 120
           LGPHGAPPSQSKQDLNP NRK RLK KLKEADRRTT GRENKLENLRELVG GKSSTNMT
Sbjct: 61  LGPHGAPPSQSKQDLNPTNRKQRLKLKLKEADRRTTMGRENKLENLRELVGAGKSSTNMT 120

Query: 121 KGSSRDWLDPHCHEAQFEK 140
           KGSSRDWLDPHCHEA+FEK
Sbjct: 121 KGSSRDWLDPHCHEAEFEK 137

[Close]

BLAST of Carg12873 vs. TAIR 10
Match: AT5G55640.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 7.4e-34
Identity = 85/137 (62.04%), Postives = 99/137 (72.26%), Query Frame = 0


Query: 10  PPVEE-DEWDTDGFVIPSLGIEEEETDQTKVSSPEVEIQDP-PPKVKEEMTIYLGPHGAP 69
           P VE+ DEWDTDGFVIPSL IEE++ +    S  EVE   P  PK K E  IYLGPHGAP
Sbjct: 11  PKVEDNDEWDTDGFVIPSLEIEEDKVNNNNDS--EVETSKPSSPKSKAEENIYLGPHGAP 70

Query: 70  PSQSKQ-DLNPANRKHRLKQKLKEADRRTT-TGRENKLENLRELVGGG---KSSTNMTKG 129
           PSQ +    N ++RK R KQ LKEAD++ + +GRENK+ NLRELVGGG   +  TNM KG
Sbjct: 71  PSQLQDGGSNTSSRKQRFKQMLKEADQKMSGSGRENKMANLRELVGGGAGAEKGTNMGKG 130

Query: 130 SSRDWLDPHCHEAQFEK 140
            SRDWLDPHCHE+QFEK
Sbjct: 131 VSRDWLDPHCHESQFEK 145

The following BLAST results are available for this feature:

BLAST of Carg12873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936022.1	1.4e-71	100.00	uncharacterized protein LOC111442743 [Cucurbita moschata] >KAG7024971.1 hypothet...	[more]
KAG6592094.1	1.9e-71	99.28	hypothetical protein SDJN03_14440, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022975858.1	1.2e-70	98.56	uncharacterized protein LOC111476432 [Cucurbita maxima]	[more]
XP_023536283.1	4.6e-70	97.84	uncharacterized protein LOC111797504 [Cucurbita pepo subsp. pepo]	[more]
XP_038898121.1	1.4e-63	91.37	uncharacterized protein LOC120085905 [Benincasa hispida]	[more]

BLAST of Carg12873 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F787	6.9e-72	100.00	uncharacterized protein LOC111442743 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IKG2	5.8e-71	98.56	uncharacterized protein LOC111476432 OS=Cucurbita maxima OX=3661 GN=LOC111476432...	[more]
A0A0A0K8B7	2.2e-62	89.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G099280 PE=4 SV=1	[more]
A0A6J1CE06	5.0e-62	90.65	uncharacterized protein LOC111010385 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A1S3CJS1	2.5e-61	88.49	uncharacterized protein LOC103501243 OS=Cucumis melo OX=3656 GN=LOC103501243 PE=...	[more]

BLAST of Carg12873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55640.1	7.4e-34	62.04	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..107
None	No IPR available	PANTHER	PTHR36075	BNAA10G09820D PROTEIN	coord: 1..139
None	No IPR available	PANTHER	PTHR36075:SF1	BNAA10G09820D PROTEIN	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12873-RA	Carg12873-RA	mRNA