Carg12864 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12864
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-dependent metalloprotease WSS1 isoform X2
Location	Carg_Chr09: 5604810 .. 5606016 (-)
RNA-Seq Expression	Carg12864
Synteny	Carg12864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCAATCCCCTCTTTCTTCCCTTCGCAAATCTTCCCTAGTTGCTGCAGAAGGAAGAAGACGTTTGAGATCTCTACTTCCATCTGGGCCTAAACGGCTTGGTGGTGATAGCGACATCATGGTCGCACTAAGTCCTGTACAAGCAGCTGCAATGGCTGCAGAAAGGAGGCTTCAGGATGATATTTGGTGCGCTTCATCTCAAGCAATGCCTGTGGATGAGGATTGTTGCTCTGATTTTCCATCAGAAATGACTGAGGATTGTTGCTCTGATTTTCCATCAGAAGTGGCGCTTCCCCCCCAAGCAGGTGAATCGGGGCCGTTTAGCCATCCAAGTCAGGGTGTGGATACATTCCACCACAAAAGATGTCGTGAGTCAGAAAGGAGTTCTATTAAGTCATCCAATGGTCACCTGAAACCTGATTTTGTTGATTTATCCAAAGATAATGTAATCCCTGGTTCCTCTGCTGACTATGATGCCGAATCAAATAAGCGTCATAAAATGACATATAGAGTTCCATTTCCTCAATCTTGTGCAGAAACTACCTCAATAGATCTTCCCTGTTCATCCTCTAATTTGATGCCAATTCATGATGGAACTACTCATCCTGGAGAACTTTCCATGTGGGAGTGTGGAAATTGCACCTTACTGAATCCAGTATGTGTTCTGAACTTCATTGATTCATATATTTGATTACTATATGAACATCATCGTTGCACAATCTCTATACTTTTCCTCAATGCATGCTTGGACTGGAGTGAGAATTGTAAAAATTAGCACCATAGATTAGTCCTTTAATTTAACTTCACATTGCTACATATAAAAATGTACATATTTACCGTAAAGTATCATTATGGGCACGTTTATTATATATCGTCCTGCCAAGCTTCTCACTGTTTGTTTTTTCCATGCCAATGTTCATTGTCATGCAGCCACTAGCTCCAATATGTGAGCTCTGTTTCTCACCGAAGCCAAAAGCTGCTGATACCAAATACAAATTCTGGTCGTGTAAATTCTGCACCTTAGAAAACAGTGTGAAGTTGGAGAAATGCTCAGCCTGTGGTCAATGGAGATATTCTCATGGCCAACGAGTGTCGACTCGAGGACCAAATATTGGCACGTGAGAGGCTTTTGATATATGCTTGTAAGGCTTCTAAACTACAGTATAAGTTAGCTGATTGCTAAGAAAATTAAGCTGCATCTCTTG

mRNA sequence

ATGCATCAATCCCCTCTTTCTTCCCTTCGCAAATCTTCCCTAGTTGCTGCAGAAGGAAGAAGACGTTTGAGATCTCTACTTCCATCTGGGCCTAAACGGCTTGGTGGTGATAGCGACATCATGGTCGCACTAAGTCCTGTACAAGCAGCTGCAATGGCTGCAGAAAGGAGGCTTCAGGATGATATTTGGTGCGCTTCATCTCAAGCAATGCCTGTGGATGAGGATTGTTGCTCTGATTTTCCATCAGAAATGACTGAGGATTGTTGCTCTGATTTTCCATCAGAAGTGGCGCTTCCCCCCCAAGCAGGTGAATCGGGGCCGTTTAGCCATCCAAGTCAGGGTGTGGATACATTCCACCACAAAAGATGTCGTGAGTCAGAAAGGAGTTCTATTAAGTCATCCAATGGTCACCTGAAACCTGATTTTGTTGATTTATCCAAAGATAATGTAATCCCTGGTTCCTCTGCTGACTATGATGCCGAATCAAATAAGCGTCATAAAATGACATATAGAGTTCCATTTCCTCAATCTTGTGCAGAAACTACCTCAATAGATCTTCCCTGTTCATCCTCTAATTTGATGCCAATTCATGATGGAACTACTCATCCTGGAGAACTTTCCATGTGGGAGTGTGGAAATTGCACCTTACTGAATCCACCACTAGCTCCAATATGTGAGCTCTGTTTCTCACCGAAGCCAAAAGCTGCTGATACCAAATACAAATTCTGGTCGTGTAAATTCTGCACCTTAGAAAACAGTGTGAAGTTGGAGAAATGCTCAGCCTGTGGTCAATGGAGATATTCTCATGGCCAACGAGTGTCGACTCGAGGACCAAATATTGGCACGTGAGAGGCTTTTGATATATGCTTGTAAGGCTTCTAAACTACAGTATAAGTTAGCTGATTGCTAAGAAAATTAAGCTGCATCTCTTG

Coding sequence (CDS)

ATGCATCAATCCCCTCTTTCTTCCCTTCGCAAATCTTCCCTAGTTGCTGCAGAAGGAAGAAGACGTTTGAGATCTCTACTTCCATCTGGGCCTAAACGGCTTGGTGGTGATAGCGACATCATGGTCGCACTAAGTCCTGTACAAGCAGCTGCAATGGCTGCAGAAAGGAGGCTTCAGGATGATATTTGGTGCGCTTCATCTCAAGCAATGCCTGTGGATGAGGATTGTTGCTCTGATTTTCCATCAGAAATGACTGAGGATTGTTGCTCTGATTTTCCATCAGAAGTGGCGCTTCCCCCCCAAGCAGGTGAATCGGGGCCGTTTAGCCATCCAAGTCAGGGTGTGGATACATTCCACCACAAAAGATGTCGTGAGTCAGAAAGGAGTTCTATTAAGTCATCCAATGGTCACCTGAAACCTGATTTTGTTGATTTATCCAAAGATAATGTAATCCCTGGTTCCTCTGCTGACTATGATGCCGAATCAAATAAGCGTCATAAAATGACATATAGAGTTCCATTTCCTCAATCTTGTGCAGAAACTACCTCAATAGATCTTCCCTGTTCATCCTCTAATTTGATGCCAATTCATGATGGAACTACTCATCCTGGAGAACTTTCCATGTGGGAGTGTGGAAATTGCACCTTACTGAATCCACCACTAGCTCCAATATGTGAGCTCTGTTTCTCACCGAAGCCAAAAGCTGCTGATACCAAATACAAATTCTGGTCGTGTAAATTCTGCACCTTAGAAAACAGTGTGAAGTTGGAGAAATGCTCAGCCTGTGGTCAATGGAGATATTCTCATGGCCAACGAGTGTCGACTCGAGGACCAAATATTGGCACGTGA

Protein sequence

MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDDIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHHKRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAETTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKYKFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT

Homology

[Close]

BLAST of Carg12864 vs. NCBI nr
Match: KAG7024962.1 (hypothetical protein SDJN02_13782, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588.2 bits (1515), Expect = 3.8e-164
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD
Sbjct: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH
Sbjct: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE
Sbjct: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY
Sbjct: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT
Sbjct: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 282

[Close]

BLAST of Carg12864 vs. NCBI nr
Match: XP_023536328.1 (uncharacterized protein LOC111797532 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 262/282 (92.91%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           MHQ PLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD
Sbjct: 93  MHQPPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 152

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCASSQAMPVD            EDCCSDFPSE ALPPQAGESGPFS+PSQGVD  HH
Sbjct: 153 DIWCASSQAMPVD------------EDCCSDFPSEAALPPQAGESGPFSNPSQGVDALHH 212

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KR RESERSSIKSSNGHLKPDFVDLSKDNVIPGSSA YDAESNKRHKMTYRVPFPQSCAE
Sbjct: 213 KRRRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSAGYDAESNKRHKMTYRVPFPQSCAE 272

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY
Sbjct: 273 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 332

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 333 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 362

[Close]

BLAST of Carg12864 vs. NCBI nr
Match: XP_023536323.1 (uncharacterized protein LOC111797532 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536324.1 uncharacterized protein LOC111797532 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536325.1 uncharacterized protein LOC111797532 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 262/282 (92.91%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           MHQ PLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD
Sbjct: 181 MHQPPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 240

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCASSQAMPVD            EDCCSDFPSE ALPPQAGESGPFS+PSQGVD  HH
Sbjct: 241 DIWCASSQAMPVD------------EDCCSDFPSEAALPPQAGESGPFSNPSQGVDALHH 300

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KR RESERSSIKSSNGHLKPDFVDLSKDNVIPGSSA YDAESNKRHKMTYRVPFPQSCAE
Sbjct: 301 KRRRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSAGYDAESNKRHKMTYRVPFPQSCAE 360

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY
Sbjct: 361 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 420

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 421 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 450

[Close]

BLAST of Carg12864 vs. NCBI nr
Match: XP_023536327.1 (uncharacterized protein LOC111797532 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 262/282 (92.91%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           MHQ PLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD
Sbjct: 146 MHQPPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 205

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCASSQAMPVD            EDCCSDFPSE ALPPQAGESGPFS+PSQGVD  HH
Sbjct: 206 DIWCASSQAMPVD------------EDCCSDFPSEAALPPQAGESGPFSNPSQGVDALHH 265

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KR RESERSSIKSSNGHLKPDFVDLSKDNVIPGSSA YDAESNKRHKMTYRVPFPQSCAE
Sbjct: 266 KRRRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSAGYDAESNKRHKMTYRVPFPQSCAE 325

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY
Sbjct: 326 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 385

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 386 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 415

[Close]

BLAST of Carg12864 vs. NCBI nr
Match: XP_023536326.1 (uncharacterized protein LOC111797532 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 262/282 (92.91%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           MHQ PLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD
Sbjct: 158 MHQPPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 217

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCASSQAMPVD            EDCCSDFPSE ALPPQAGESGPFS+PSQGVD  HH
Sbjct: 218 DIWCASSQAMPVD------------EDCCSDFPSEAALPPQAGESGPFSNPSQGVDALHH 277

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KR RESERSSIKSSNGHLKPDFVDLSKDNVIPGSSA YDAESNKRHKMTYRVPFPQSCAE
Sbjct: 278 KRRRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSAGYDAESNKRHKMTYRVPFPQSCAE 337

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY
Sbjct: 338 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 397

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 398 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 427

[Close]

BLAST of Carg12864 vs. ExPASy TrEMBL
Match: A0A6J1IGD8 (uncharacterized protein LOC111476695 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111476695 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136
Identity = 246/281 (87.54%), Postives = 251/281 (89.32%), Query Frame = 0


Query: 2   HQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 61
           HQ PLSSLRKSSL AAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD
Sbjct: 148 HQPPLSSLRKSSLAAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 207

Query: 62  IWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHHK 121
           IWCASSQAMPVD            EDCCSDF SEVAL PQAGES  FS+PSQG+D FH K
Sbjct: 208 IWCASSQAMPVD------------EDCCSDFSSEVALRPQAGESQLFSNPSQGMDAFHDK 267

Query: 122 RCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAET 181
           RCRE+ERSSIKSSNGHLKPDF       VIPGSSADYDAESNKRHKMT+RVPFPQSCAET
Sbjct: 268 RCRETERSSIKSSNGHLKPDF-------VIPGSSADYDAESNKRHKMTFRVPFPQSCAET 327

Query: 182 TSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKYK 241
           +SID PCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPK KAADTKYK
Sbjct: 328 SSIDRPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKSKAADTKYK 387

Query: 242 FWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           FWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 388 FWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 409

[Close]

BLAST of Carg12864 vs. ExPASy TrEMBL
Match: A0A6J1IF83 (uncharacterized protein LOC111476695 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476695 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136
Identity = 246/281 (87.54%), Postives = 251/281 (89.32%), Query Frame = 0


Query: 2   HQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 61
           HQ PLSSLRKSSL AAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD
Sbjct: 214 HQPPLSSLRKSSLAAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 273

Query: 62  IWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHHK 121
           IWCASSQAMPVD            EDCCSDF SEVAL PQAGES  FS+PSQG+D FH K
Sbjct: 274 IWCASSQAMPVD------------EDCCSDFSSEVALRPQAGESQLFSNPSQGMDAFHDK 333

Query: 122 RCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAET 181
           RCRE+ERSSIKSSNGHLKPDF       VIPGSSADYDAESNKRHKMT+RVPFPQSCAET
Sbjct: 334 RCRETERSSIKSSNGHLKPDF-------VIPGSSADYDAESNKRHKMTFRVPFPQSCAET 393

Query: 182 TSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKYK 241
           +SID PCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPK KAADTKYK
Sbjct: 394 SSIDRPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKSKAADTKYK 453

Query: 242 FWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           FWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 454 FWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 475

[Close]

BLAST of Carg12864 vs. ExPASy TrEMBL
Match: A0A6J1ILI5 (uncharacterized protein LOC111476695 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476695 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136
Identity = 246/281 (87.54%), Postives = 251/281 (89.32%), Query Frame = 0


Query: 2   HQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 61
           HQ PLSSLRKSSL AAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD
Sbjct: 213 HQPPLSSLRKSSLAAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDD 272

Query: 62  IWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHHK 121
           IWCASSQAMPVD            EDCCSDF SEVAL PQAGES  FS+PSQG+D FH K
Sbjct: 273 IWCASSQAMPVD------------EDCCSDFSSEVALRPQAGESQLFSNPSQGMDAFHDK 332

Query: 122 RCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAET 181
           RCRE+ERSSIKSSNGHLKPDF       VIPGSSADYDAESNKRHKMT+RVPFPQSCAET
Sbjct: 333 RCRETERSSIKSSNGHLKPDF-------VIPGSSADYDAESNKRHKMTFRVPFPQSCAET 392

Query: 182 TSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKYK 241
           +SID PCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPK KAADTKYK
Sbjct: 393 SSIDRPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKSKAADTKYK 452

Query: 242 FWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           FWSCKFCTLENSVKLEKCSACGQWRYSHGQ VSTRGPNIGT
Sbjct: 453 FWSCKFCTLENSVKLEKCSACGQWRYSHGQPVSTRGPNIGT 474

[Close]

BLAST of Carg12864 vs. ExPASy TrEMBL
Match: A0A1S4E403 (uncharacterized protein LOC103501234 OS=Cucumis melo OX=3656 GN=LOC103501234 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.5e-118
Identity = 220/282 (78.01%), Postives = 235/282 (83.33%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           + Q PLSSLRKSSL AAEGRRRL SLLPSGP RLGGDS+IMVALSPVQAAAMAAERRLQD
Sbjct: 145 VRQPPLSSLRKSSLAAAEGRRRLASLLPSGPNRLGGDSNIMVALSPVQAAAMAAERRLQD 204

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCAS Q MPVDEDCC      + EDCC  FPSEVA     G     ++ S+GVD  H 
Sbjct: 205 DIWCASFQGMPVDEDCC-----PVDEDCCPHFPSEVA-HSSKGVLRSSNNLSKGVDALHQ 264

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KR RESERSS KSSNGHL  DFVDLSKD+ IPGSSA+Y AESNKRHK+  R+ FPQS AE
Sbjct: 265 KRSRESERSSNKSSNGHLISDFVDLSKDDAIPGSSANYRAESNKRHKLPDRISFPQSSAE 324

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
            +SIDL CSSSNLMP HDGT HPGELSMWECGNCTLLNPPLAPICELCFS KPK +DT+Y
Sbjct: 325 ASSIDLSCSSSNLMPRHDGTIHPGELSMWECGNCTLLNPPLAPICELCFSQKPKDSDTRY 384

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKC+ACGQWRYSHGQ VSTRGPN+GT
Sbjct: 385 KFWSCKFCTLENSVKLEKCTACGQWRYSHGQPVSTRGPNLGT 420

[Close]

BLAST of Carg12864 vs. ExPASy TrEMBL
Match: A0A0A0K3J6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G161030 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.6e-118
Identity = 218/282 (77.30%), Postives = 232/282 (82.27%), Query Frame = 0


Query: 1   MHQSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQD 60
           + Q  LSSLRKSSL AAEGRRRL SLLPSGP RLGGDS+IMVALSPVQAAAMAAERRLQD
Sbjct: 145 VRQPSLSSLRKSSLAAAEGRRRLGSLLPSGPNRLGGDSNIMVALSPVQAAAMAAERRLQD 204

Query: 61  DIWCASSQAMPVDEDCCSDFPSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTFHH 120
           DIWCAS Q MPVD            EDCC  FPSE A   QAG+SGPF + S+ VD  H 
Sbjct: 205 DIWCASFQGMPVD------------EDCCPHFPSEAAHSSQAGKSGPFHNLSKSVDALHQ 264

Query: 121 KRCRESERSSIKSSNGHLKPDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQSCAE 180
           KRCRESERS  KSSNG L+PDFVDLSKDN IPGSSADY AESNKRHK+  R+ FPQS AE
Sbjct: 265 KRCRESERSFNKSSNGRLEPDFVDLSKDNAIPGSSADYSAESNKRHKLPDRISFPQSSAE 324

Query: 181 TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICELCFSPKPKAADTKY 240
           T+SIDL CSSSNLM  +DGT HPGELSMWECGNCTLLNPPLAPICELCFS KP  +DT+Y
Sbjct: 325 TSSIDLSCSSSNLMARNDGTIHPGELSMWECGNCTLLNPPLAPICELCFSQKPTDSDTRY 384

Query: 241 KFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           KFWSCKFCTLENSVKLEKC+AC QWRYSHGQ VSTRGPN+GT
Sbjct: 385 KFWSCKFCTLENSVKLEKCTACDQWRYSHGQPVSTRGPNLGT 414

[Close]

BLAST of Carg12864 vs. TAIR 10
Match: AT1G55915.1 (zinc ion binding )

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-50
Identity = 132/296 (44.59%), Postives = 162/296 (54.73%), Query Frame = 0


Query: 3   QSPLSSLRKSSLVAAEGRRRLRSLLPSGPKRLGGDSDIMVALSPVQAAAMAAERRLQDDI 62
           Q  LS LR ++  AAE R R  +LLPSGP+RLGGDS IM  LSP+QAAAMAAERRL DDI
Sbjct: 151 QPSLSFLRATAATAAEKRVRAGTLLPSGPQRLGGDSSIMSDLSPIQAAAMAAERRLLDDI 210

Query: 63  WCASSQAMPV-DEDCCSDF---PSEMTEDCCSDFPSEVALPPQAGESGPFSHPSQGVDTF 122
           WC S     + DE+  SD    P  + E C S                        V+  
Sbjct: 211 WCGSQSTDALEDEENDSDTYKEPVSIRETCTS------------------------VNGK 270

Query: 123 HHKRCRE-SERSSIKSSNGHLK-PDFVDLSKDNVIPGSSADYDAESNKRHKMTYRVPFPQ 182
             KRC   S   S   S+ H +  D +DL++++        ++    KR+    R P  Q
Sbjct: 271 SVKRCNSWSNAHSCPPSSSHQQGSDVIDLTEES--------FEIRCTKRN----RSPGDQ 330

Query: 183 --SCAE--------TTSIDLPCSSSNLMPIHDGTTHPGELSMWECGNCTLLNPPLAPICE 242
             SCA+         +SI LP +S N     +      E +MWEC  CTLLNP LAPICE
Sbjct: 331 GPSCAKDVPNAGVMKSSIPLPSTSYNANQSRE------ESTMWECAECTLLNPSLAPICE 390

Query: 243 LCFSPKPKAADTKYKFWSCKFCTLENSVKLEKCSACGQWRYSHGQRVSTRGPNIGT 283
           LC + KPK  + K+K WSCKFCTLEN VKLEKC ACGQWRYS+G  +ST  PN+GT
Sbjct: 391 LCTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLSTGAPNVGT 404

The following BLAST results are available for this feature:

BLAST of Carg12864 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024962.1	3.8e-164	100.00	hypothetical protein SDJN02_13782, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023536328.1	1.5e-147	92.91	uncharacterized protein LOC111797532 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_023536323.1	1.5e-147	92.91	uncharacterized protein LOC111797532 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023536327.1	1.5e-147	92.91	uncharacterized protein LOC111797532 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023536326.1	1.5e-147	92.91	uncharacterized protein LOC111797532 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12864 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGD8	6.2e-136	87.54	uncharacterized protein LOC111476695 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IF83	6.2e-136	87.54	uncharacterized protein LOC111476695 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ILI5	6.2e-136	87.54	uncharacterized protein LOC111476695 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S4E403	1.5e-118	78.01	uncharacterized protein LOC103501234 OS=Cucumis melo OX=3656 GN=LOC103501234 PE=...	[more]
A0A0A0K3J6	2.6e-118	77.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G161030 PE=4 SV=1	[more]

BLAST of Carg12864 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55915.1	2.3e-50	44.59	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 241..265 e-value: 0.058 score: 21.7 coord: 207..231 e-value: 0.045 score: 22.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 241..263 e-value: 0.0016 score: 17.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 209..228
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 243..262
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 202..234 score: 8.4112
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 239..268 score: 8.196648
None	No IPR available	GENE3D	2.30.30.380		coord: 203..242 e-value: 4.5E-7 score: 31.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..124
None	No IPR available	PANTHER	PTHR46622	DNA-DEPENDENT METALLOPROTEASE WSS1	coord: 2..282
None	No IPR available	PANTHER	PTHR46622:SF3	ZINC ION BINDING PROTEIN	coord: 2..282
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 207..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12864-RA	Carg12864-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding