Carg12860 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12860
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription termination factor MTERF9, chloroplastic
Location	Carg_Chr09: 5589151 .. 5592569 (-)
RNA-Seq Expression	Carg12860
Synteny	Carg12860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTATCCTTTTTTGTTATCTGTTCAAAAATGGCTTCTCTCTTCCTCTTCTCTTTCTCTCCCACAATTCAATCTGATTTTCCCTCTTCTTCCGATTTCTATCCGTCCACTCAATTCTTGTACAGTTCTTCGACCTCAGCCTGTAAGTTTCATGGAGTTGGGATTGCTAGTCGGAGGAGGAGGAGGAGGAGCGTGCATCGGTTTTTGGTCCGGTCGACTCACTCCAATGCTAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGAATTTATCGCCGTTTGACAGCGATGATGATGGAGAGGATGTGGATGACCTTAGCAGTGATGATGATGATGATGATGATGATGATACTTGGTTGTATAATGTGAGTTCTTGTTTTCTGTTCTCTCTAATTTCTTGAAGTTAGATTGTTTTCGTGGTTGTTCTTATCTTAGTGTGTCTGCTGATTGATTGAATGCGGGTTTGTTTTCCGTAGAAATGGCGTGGAGTTGTGATTTTGTTTAATTTTCATTATTGGTTCCAATTTCCGACGAGGTTGGATTGATTTTTCTTGTGATGGGAAACTTGACTGTTCATTGATGAGTGAGGAGTAGAAATGAGGAGGATACAAAAAGAATTAAAAGAAGTATTTGAAACTGTGCTTATGCTGGGTACAAATTACATAGTTCTGGCCATGGACAACCAAATGAGCTCCATGAAGTTTTATATCTGGTTTTAATTGAGTAATGCAAAGAGTGCACTTGGTAAGTTAGAGGAAACTGTAGCTTTATTTTTCATGTAATTGCTTCCATGTCTGTTGCTATAATACCCCAAACCCACTACTAGTAGATACTGTCAGTTTTGGCCTGTGACATATCTTTGTCAGCCTCATGGTCTTAAAACGTGTCTACTATGGAGAGAGTTTAGTTCTACTACGACCAGTGTCTTGCACCATCCGATGACTGGCTTTGATACCATTTGTAATAGCCAAGTCGTTCTCCTCTCTAGATGCGTTTTAAAACCTTGAGGGGAAGCTCAGAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGTGGTTACAGTTGCACTCTTTTAAAGTGGATTTGGTGGCTTTTTTTGTTCATAGTTCTTTGCTTGTGTGCAGTTGATCATTGAGAATCTCACTATTTACTATCTGTCCACTGAGATTTTCATTTTCTAGGGTAATGTCTCGGATGTTGAATATGATACCAAAAGAAAGAGAGCCAAGTTGCAAAACAGAACCAGAAATAGCAACTCACAGAGAGGTTATCTTTTGCTATTTACTTTCTCCTTCTCGTAAGGCGGCGCGCACGATTTGCTCAGCATACTCTTCTTGTGCAGATAACTTGAGACATCCCAGAGAAAGTAGGGGTATTAGATCATCCAACCGCTTTGATTTACAAGATATCACAAATGATACTGAAAACCAAGACGACACGATTGAGGAGGAAGCTGGTTCTACCAATGTCGACAAGCAAGGAAAGGTGGAGTTTGAAACTTTATTAAACTTTTTAGATTGCTAAAATAAATATTAAATCTGCGTTTGTTTCCATTGATTCAGTTGATGACCAAGGAAGCTATGGAAAATAGATTTCCTCGTCTGGCAGAAGAAATAGAATTGGACAAGAAATGGTATCCTCTACTCGATTATCTTACAACATTTGGGCTCAAAGAATCACATTTCCTTCAAATGTATGAGAGACGTATGCCTTCTCTTCAAATAAATGTTAATTCTGCTCAAGAAAGACTAGAATACTTGTTGAGTGTCGGTGTGAAACAGAGGGATGTTCGAAGAATACTCATGAGGCAGCCCCAAATTCTGGAGTACACAGTAGAGAATAATTTGAAATCTCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAAATTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCGTTAAAACCCACGGTTCGATACTTGGTCGAGGAAGTTGGCATTAAGGAAAAGGATTTGGGTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAACGGATTGATGTATCATGGAACACCAGATATATGTTTCTTTCAAAGGAAATTGGAGCCCCTCGTGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCACTATAGCATCGATGACGGATTGCTGCCCCGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCGGAGATCTTGAAAGTCATAACTAGCCTTACACAGGTATTATGCATTTGTATTCTATTGTTGTCAACATCTTTTGAGAAAGAAAAAAAAACCCTTCTTATGTTAAAGCGGTTAGAAACCGCAACCCCCACAATGATATGACATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGATTTTCCCAAAAGGGCCTCATACCAATGGAGATGTAGTTTTTACTTATGAACCCATGATCATCCTCTTAGCCAATGTGGACTCCTTCCCAACCATCCTTACCTCGAACAAAGTATACCTTAAAGCCTCCCTTGAGGCCGGTAAAGCCCTTAAGCAGCCTCCCCTTAAGTGAGACTCGACTCCTTTCTCTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACGCTGAGTCACTTTTTGACTATATCTTCGAGGCTCACAACTTCTTTGTTTGACATTTGAGGATTCCATTGACATGATTAAGTTAAGGGCTTGACTCTGATACCATGTTAGGAACCACAACCCTCCACAATGATATGACATTTTTCATATTGAGTATAAACTCTTATGACTTTGCTTTTGGTTTTCCTAAAAAGCCTCGTACCAATGGAGATATATTCCTTGCTTATGAACCCATGATTATCCTCGTAATTAGCCAACGTGGGACTCCTTCCCAACAATCCAAAGCCTTCCATACCCAACTCTTTCTTTTTCTTGCTGTAAGAAGTGGTATTAAAAGTTACATTATACTTTAAATGTATTTGTTGCCTCATCTCGGTTGCTAACTTAATTCAAATGGTTTTTTAGTAGTTTCTTCGTAAATCTTGTCTTAGGTTCCTTCACCGGATCTGTTGATACTGCAGGTTTTTTCTCTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGCAACGAAGTGAAATCATTGACCAAATATCCCATGTATCTAAGCTTGTCCTTGGATCAAAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTCAAGAAAGCACCCAAAGGGCCATTCCCTTTAAGTTCCTTCGTTCCAACCGATGAATGTTTTTGTCAGCAGTGGGCCGAAACCAGCCTAGATAAGTATCTAGAATTTCGGAAGAGATTGCTATTGAAAGAATTTGCGCAGAAATATGAAAGGAGACGATAA

mRNA sequence

CTCTCTTATCCTTTTTTGTTATCTGTTCAAAAATGGCTTCTCTCTTCCTCTTCTCTTTCTCTCCCACAATTCAATCTGATTTTCCCTCTTCTTCCGATTTCTATCCGTCCACTCAATTCTTGTACAGTTCTTCGACCTCAGCCTGTAAGTTTCATGGAGTTGGGATTGCTAGTCGGAGGAGGAGGAGGAGGAGCGTGCATCGGTTTTTGGTCCGGTCGACTCACTCCAATGCTAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGAATTTATCGCCGTTTGACAGCGATGATGATGGAGAGGATGTGGATGACCTTAGCAGTGATGATGATGATGATGATGATGATGATACTTGGTTGTATAATGGTAATGTCTCGGATGTTGAATATGATACCAAAAGAAAGAGAGCCAAGTTGCAAAACAGAACCAGAAATAGCAACTCACAGAGAGATAACTTGAGACATCCCAGAGAAAGTAGGGGTATTAGATCATCCAACCGCTTTGATTTACAAGATATCACAAATGATACTGAAAACCAAGACGACACGATTGAGGAGGAAGCTGGTTCTACCAATGTCGACAAGCAAGGAAAGTTGATGACCAAGGAAGCTATGGAAAATAGATTTCCTCGTCTGGCAGAAGAAATAGAATTGGACAAGAAATGGTATCCTCTACTCGATTATCTTACAACATTTGGGCTCAAAGAATCACATTTCCTTCAAATGTATGAGAGACGTATGCCTTCTCTTCAAATAAATGTTAATTCTGCTCAAGAAAGACTAGAATACTTGTTGAGTGTCGGTGTGAAACAGAGGGATGTTCGAAGAATACTCATGAGGCAGCCCCAAATTCTGGAGTACACAGTAGAGAATAATTTGAAATCTCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAAATTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCGTTAAAACCCACGGTTCGATACTTGGTCGAGGAAGTTGGCATTAAGGAAAAGGATTTGGGTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAACGGATTGATGTATCATGGAACACCAGATATATGTTTCTTTCAAAGGAAATTGGAGCCCCTCGTGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCACTATAGCATCGATGACGGATTGCTGCCCCGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCGGAGATCTTGAAAGTTTTTTCTCTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGCAACGAAGTGAAATCATTGACCAAATATCCCATGTATCTAAGCTTGTCCTTGGATCAAAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTCAAGAAAGCACCCAAAGGGCCATTCCCTTTAAGTTCCTTCGTTCCAACCGATGAATGTTTTTGTCAGCAGTGGGCCGAAACCAGCCTAGATAAGTATCTAGAATTTCGGAAGAGATTGCTATTGAAAGAATTTGCGCAGAAATATGAAAGGAGACGATAA

Coding sequence (CDS)

ATGGCTTCTCTCTTCCTCTTCTCTTTCTCTCCCACAATTCAATCTGATTTTCCCTCTTCTTCCGATTTCTATCCGTCCACTCAATTCTTGTACAGTTCTTCGACCTCAGCCTGTAAGTTTCATGGAGTTGGGATTGCTAGTCGGAGGAGGAGGAGGAGGAGCGTGCATCGGTTTTTGGTCCGGTCGACTCACTCCAATGCTAGGATTCTCAAGCCCAAACGGAGGTCGAGGTTCGGTCAGAATTTATCGCCGTTTGACAGCGATGATGATGGAGAGGATGTGGATGACCTTAGCAGTGATGATGATGATGATGATGATGATGATACTTGGTTGTATAATGGTAATGTCTCGGATGTTGAATATGATACCAAAAGAAAGAGAGCCAAGTTGCAAAACAGAACCAGAAATAGCAACTCACAGAGAGATAACTTGAGACATCCCAGAGAAAGTAGGGGTATTAGATCATCCAACCGCTTTGATTTACAAGATATCACAAATGATACTGAAAACCAAGACGACACGATTGAGGAGGAAGCTGGTTCTACCAATGTCGACAAGCAAGGAAAGTTGATGACCAAGGAAGCTATGGAAAATAGATTTCCTCGTCTGGCAGAAGAAATAGAATTGGACAAGAAATGGTATCCTCTACTCGATTATCTTACAACATTTGGGCTCAAAGAATCACATTTCCTTCAAATGTATGAGAGACGTATGCCTTCTCTTCAAATAAATGTTAATTCTGCTCAAGAAAGACTAGAATACTTGTTGAGTGTCGGTGTGAAACAGAGGGATGTTCGAAGAATACTCATGAGGCAGCCCCAAATTCTGGAGTACACAGTAGAGAATAATTTGAAATCTCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAAATTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCGTTAAAACCCACGGTTCGATACTTGGTCGAGGAAGTTGGCATTAAGGAAAAGGATTTGGGTAAAGTTGTGCAGCTGAGTCCTCAAATCCTGGTTCAACGGATTGATGTATCATGGAACACCAGATATATGTTTCTTTCAAAGGAAATTGGAGCCCCTCGTGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCACTATAGCATCGATGACGGATTGCTGCCCCGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCGGAGATCTTGAAAGTTTTTTCTCTATCTTTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGCAACGAAGTGAAATCATTGACCAAATATCCCATGTATCTAAGCTTGTCCTTGGATCAAAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTCAAGAAAGCACCCAAAGGGCCATTCCCTTTAAGTTCCTTCGTTCCAACCGATGAATGTTTTTGTCAGCAGTGGGCCGAAACCAGCCTAGATAAGTATCTAGAATTTCGGAAGAGATTGCTATTGAAAGAATTTGCGCAGAAATATGAAAGGAGACGATAA

Protein sequence

MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLVRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR

Homology

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BLAST of Carg12860 vs. NCBI nr
Match: KAG7024959.1 (Transcription termination factor MTERF9, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 989.6 bits (2557), Expect = 1.0e-284
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV
Sbjct: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE 120

Query: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG 180
           YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG
Sbjct: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG 180

Query: 181 STNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS 240
           STNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS
Sbjct: 181 STNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS 240

Query: 241 LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR 300
           LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR
Sbjct: 241 LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR 300

Query: 301 VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR 360
           VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR
Sbjct: 301 VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR 360

Query: 361 YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLE 420
           YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLE
Sbjct: 361 YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLE 420

Query: 421 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFV 480
           DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFV
Sbjct: 421 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFV 480

Query: 481 PTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           PTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 PTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 518

[Close]

BLAST of Carg12860 vs. NCBI nr
Match: XP_022936628.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita moschata])

HSP 1 Score: 975.3 bits (2520), Expect = 2.0e-280
Identity = 517/528 (97.92%), Postives = 517/528 (97.92%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS---DDDDDDDDDTWLYNGNVS 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS   DDDDDDDDDTWLYNGNVS
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDDDDDDDDTWLYNGNVS 120

Query: 121 DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE 180
           DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE
Sbjct: 121 DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE 180

Query: 181 EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR 240
           EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR
Sbjct: 181 EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR 240

Query: 241 MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP 300
           MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP
Sbjct: 241 MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP 300

Query: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW 360
           NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW
Sbjct: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW 360

Query: 361 NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK---- 420
           NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK    
Sbjct: 361 NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITS 420

Query: 421 ---VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480
              VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP
Sbjct: 421 LTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480

Query: 481 KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 528

[Close]

BLAST of Carg12860 vs. NCBI nr
Match: XP_022976275.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita maxima])

HSP 1 Score: 962.2 bits (2486), Expect = 1.8e-276
Identity = 510/526 (96.96%), Postives = 514/526 (97.72%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQF YS+STSACKFHGVGIAS RRRRRSV RFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFSYSTSTSACKFHGVGIASGRRRRRSVRRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSD-DDDDDDDDTWLYNGNVSDV 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSD DDD+DDDDTWLYNGNVSDV
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDEDDDDTWLYNGNVSDV 120

Query: 121 EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA 180
           EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA
Sbjct: 121 EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA 180

Query: 181 GSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP 240
           GSTNVDKQGKLMTK+A+ENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP
Sbjct: 181 GSTNVDKQGKLMTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP 240

Query: 241 SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS 300
           SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS
Sbjct: 241 SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS 300

Query: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT 360
           RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT
Sbjct: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT 360

Query: 361 RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK------ 420
           RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK      
Sbjct: 361 RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLT 420

Query: 421 -VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480
            VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG
Sbjct: 421 QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480

Query: 481 PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 526

[Close]

BLAST of Carg12860 vs. NCBI nr
Match: XP_023536515.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 962.2 bits (2486), Expect = 1.8e-276
Identity = 509/525 (96.95%), Postives = 513/525 (97.71%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQF Y+SSTSACKFHGVGI SRRRRRRSV RFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFSYTSSTSACKFHGVGIGSRRRRRRSVRRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS D+DDDD+DTWLYNGNVSDVE
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS-DEDDDDEDTWLYNGNVSDVE 120

Query: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG 180
           YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG
Sbjct: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEAG 180

Query: 181 STNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS 240
           STNVDKQGKLMTK+AMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS
Sbjct: 181 STNVDKQGKLMTKKAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPS 240

Query: 241 LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR 300
           LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR
Sbjct: 241 LQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSR 300

Query: 301 VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR 360
           VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR
Sbjct: 301 VGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTR 360

Query: 361 YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK------- 420
           YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK       
Sbjct: 361 YMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLTQ 420

Query: 421 VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGP 480
           VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGP
Sbjct: 421 VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGP 480

Query: 481 FPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           FPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 FPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 524

[Close]

BLAST of Carg12860 vs. NCBI nr
Match: KAG6592082.1 (Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 862.4 bits (2227), Expect = 1.9e-246
Identity = 461/472 (97.67%), Postives = 461/472 (97.67%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS--DDDDDDDDDTWLYNGNVSD 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS  DDDDDDDDDTWLYNGNVSD
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDDDDDDDTWLYNGNVSD 120

Query: 121 VEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEE 180
           VEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEE
Sbjct: 121 VEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEE 180

Query: 181 AGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRM 240
           AGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRM
Sbjct: 181 AGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRM 240

Query: 241 PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN 300
           PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN
Sbjct: 241 PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN 300

Query: 301 SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN 360
           SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN
Sbjct: 301 SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN 360

Query: 361 TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK----- 420
           TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK     
Sbjct: 361 TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSL 420

Query: 421 --VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 464
             VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHR L
Sbjct: 421 TQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRSL 472

[Close]

BLAST of Carg12860 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.8e-162
Identity = 324/526 (61.60%), Postives = 389/526 (73.95%), Query Frame = 0


Query: 1   MASLFLFSF-SPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFL 60
           MA   L+ F +P I    PS S        L+   +  C        + RR  R    F+
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESP-------LFVLGSDKCS------PATRRPSRKTRGFV 60

Query: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDV 120
           V   HSN +I+ PK++SR+GQ LSP+DSD+D         DDDDDDDDD WL N + ++V
Sbjct: 61  VTYAHSNPKIINPKKKSRYGQTLSPYDSDED--------DDDDDDDDDDDWLLNDDFAEV 120

Query: 121 -EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEE 180
            EY+  +K+ K   +T    S +  +  P ES      +  DL    N T       E++
Sbjct: 121 TEYE--KKKPKSHKQTIAKKSVKKGIVKPEESE--TDEDDLDLGISPNATS------EKK 180

Query: 181 AGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRM 240
             S  +D +GK+ +++ +E  +PRLAEEI++D K  PLLDYL+TFGLKESHF+QMYER M
Sbjct: 181 KESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHM 240

Query: 241 PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN 300
           PSLQINV SAQERL+YLLSVGVK RD++R+L+RQPQIL+YTVENNLK+H++FL+ LGIPN
Sbjct: 241 PSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPN 300

Query: 301 SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN 360
           S++GQI+AA PSLFSYSVENSL+PT+RYL+EEVGIKE D+GKVVQLSPQILVQR+D++WN
Sbjct: 301 SKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWN 360

Query: 361 TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK----- 420
           TRYMFLSKE+GAPRD+VVKMV KHPQLLHYSIDDG LPRINFLRSIGM NS+ILK     
Sbjct: 361 TRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSL 420

Query: 421 --VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPK 480
             V SLSLEDNLKPKYMYL+NEL NEV  LTKYPMYLSLSLDQRIRPRHRFLV LKK  K
Sbjct: 421 TQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRK 480

Query: 481 GPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 518
           GPFPLSS VP DE FCQQWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 GPFPLSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]

BLAST of Carg12860 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-22
Identity = 70/257 (27.24%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 217 LDYLTTFGLKESHFLQM---YERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQP 276
           +D+    G+ ++ F  M   Y + +      V   ++++ YL   G+   +V R+L  +P
Sbjct: 320 VDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQV--MEKKINYLKEFGLSTEEVGRLLAYKP 379

Query: 277 QILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI 336
            ++  ++E   K  V +   LGIP   + +I+   P L+   +E ++ P VR+L +E+GI
Sbjct: 380 HLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFL-QEMGI 439

Query: 337 KEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDG 396
             + +G ++   P +L   +        +FL    G  + ++ K++   P LL  SI   
Sbjct: 440 PNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTK 499

Query: 397 LLPRINFLRSIGMR---NSEILKVFSLSLE---DNLKPKYMYLINELRNEVKSLTKYPMY 456
           L P + +  S+G+R     E++  F + L    DNL+PKY YL   +   ++ L ++P +
Sbjct: 500 LEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRF 559

Query: 457 LSLSLDQRIRPRHRFLV 465
            S SL++RI PRH  +V
Sbjct: 560 FSYSLERRIIPRHTIMV 573

[Close]

BLAST of Carg12860 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 4.4e-20
Identity = 64/223 (28.70%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 249 QERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 308
           +E+L YL  + V   D  + L   P +    + +++ S    L S G+    VG+I+   
Sbjct: 34  REKLIYLQDLNV---DPHKALRVNPSLRSAPI-SSVVSVETLLSSTGLSRPAVGRILDMF 93

Query: 309 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEI 368
           P L +   E+ + P +R+L  E+ I E+D+ K +   P++L+  +D        FL    
Sbjct: 94  PDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLG 153

Query: 369 GAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFL-RSIGMRNSEILK-------VFSLSLE 428
              RD +    +++  LL  +++  L+P+I +L   +G    E+ K       + + S++
Sbjct: 154 FVGRDTI---TSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 213

Query: 429 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 464
           +NL PK  + I E+R +VK L ++P Y S SL+++I+PRHR L
Sbjct: 214 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLL 249

[Close]

BLAST of Carg12860 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-19
Identity = 65/234 (27.78%), Postives = 120/234 (51.28%), Query Frame = 0


Query: 198 NRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQERLEYLL- 257
           +R P++   + LD++  P+++ L++ G           +  P L    +S +E+L  LL 
Sbjct: 64  SRCPKIL-TLRLDERLIPMVECLSSLGRNPREVASAITKFPPILS---HSVEEKLCPLLA 123

Query: 258 ---SVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGI-PNSRVGQIIAAAPSLF 317
              ++GV +  + ++++  P+++ Y+++  L   V+FL SLG+  +  +G+++   P L 
Sbjct: 124 FFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLM 183

Query: 318 SYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPR 377
            YSV+  L+PT  +L   VG+ E  +  VV   PQ+L + ++      Y +L KE G   
Sbjct: 184 GYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL-KECGFGD 243

Query: 378 DNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLEDNLKPK 427
             +  MVT +PQ+L  S+ + L PRI FL  +  R  + +  +       LK K
Sbjct: 244 SQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKK 292

[Close]

BLAST of Carg12860 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.6e-17
Identity = 68/305 (22.30%), Postives = 135/305 (44.26%), Query Frame = 0


Query: 203 LAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQIN-VNSAQERLEYLLSVGVK 262
           LA    + K   P+LDYL   G+++     +  R    L  + V      ++YL  + V+
Sbjct: 134 LALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVR 193

Query: 263 QRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLK 322
             DV R+L R P++L + +E  + + +A+L+ +G+   +VG +I   P +    V   +K
Sbjct: 194 PHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIK 253

Query: 323 PTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTK 382
           P V +L E +G++   + ++++  P +L   ++         L  E G  ++ +  +V +
Sbjct: 254 PFVEHL-EGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEAL-LEFGVRKEALAFIVAQ 313

Query: 383 HPQLLHYSIDDGL------------------------------------LPRINFLRSIG 442
           +P +L   + D L                                    L  +NFL S G
Sbjct: 314 YPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCG 373

Query: 443 MRNSEILK-------VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRP 464
              S++ K       + +L++ D +K  + Y  NE+  +++ L ++P + +  L+  +RP
Sbjct: 374 FLLSQVSKMVVACPQLLALNM-DIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRP 433

[Close]

BLAST of Carg12860 vs. ExPASy TrEMBL
Match: A0A6J1FDR7 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443171 PE=3 SV=1)

HSP 1 Score: 975.3 bits (2520), Expect = 9.8e-281
Identity = 517/528 (97.92%), Postives = 517/528 (97.92%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS---DDDDDDDDDTWLYNGNVS 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSS   DDDDDDDDDTWLYNGNVS
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDDDDDDDDTWLYNGNVS 120

Query: 121 DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE 180
           DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE
Sbjct: 121 DVEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEE 180

Query: 181 EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR 240
           EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR
Sbjct: 181 EAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERR 240

Query: 241 MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP 300
           MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP
Sbjct: 241 MPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIP 300

Query: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW 360
           NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW
Sbjct: 301 NSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSW 360

Query: 361 NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK---- 420
           NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK    
Sbjct: 361 NTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITS 420

Query: 421 ---VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480
              VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP
Sbjct: 421 LTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAP 480

Query: 481 KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 KGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 528

[Close]

BLAST of Carg12860 vs. ExPASy TrEMBL
Match: A0A6J1IJ03 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476719 PE=3 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 8.6e-277
Identity = 510/526 (96.96%), Postives = 514/526 (97.72%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFLFSFSPTI SDFPSSSDFYPSTQF YS+STSACKFHGVGIAS RRRRRSV RFLV
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFSYSTSTSACKFHGVGIASGRRRRRSVRRFLV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSD-DDDDDDDDTWLYNGNVSDV 120
           RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSD DDD+DDDDTWLYNGNVSDV
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDEDDDEDDDDTWLYNGNVSDV 120

Query: 121 EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA 180
           EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA
Sbjct: 121 EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEEA 180

Query: 181 GSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP 240
           GSTNVDKQGKLMTK+A+ENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP
Sbjct: 181 GSTNVDKQGKLMTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMP 240

Query: 241 SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS 300
           SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS
Sbjct: 241 SLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNS 300

Query: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT 360
           RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT
Sbjct: 301 RVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNT 360

Query: 361 RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK------ 420
           RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK      
Sbjct: 361 RYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLT 420

Query: 421 -VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480
            VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG
Sbjct: 421 QVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKG 480

Query: 481 PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR
Sbjct: 481 PFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 526

[Close]

BLAST of Carg12860 vs. ExPASy TrEMBL
Match: A0A1S3CI38 (transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501230 PE=3 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 9.0e-234
Identity = 442/535 (82.62%), Postives = 475/535 (88.79%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASL LFSFSPT+ SDFPSSSDFY S+QFL +SSTSA  F  V I S R RRR+V RF+V
Sbjct: 1   MASLSLFSFSPTLHSDFPSSSDFYFSSQFLLTSSTSASSFRAVPIGS-RSRRRNVRRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE 120
           RSTHSNA ILKPK RSRFGQ LSP+D+D+DG+DV++ SS  D DDDDD WL NG+ SDVE
Sbjct: 61  RSTHSNATILKPKWRSRFGQTLSPYDTDEDGDDVEEFSS--DGDDDDDAWLDNGDFSDVE 120

Query: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIR----------SSNRFDLQDITNDTEN 180
           YD KRKRAK Q++TRN+NSQR NLRHP E RGI+           SN  D QDITNDT  
Sbjct: 121 YDAKRKRAKSQSKTRNNNSQRGNLRHPSEGRGIKFSNDGKSFKVKSNHLDFQDITNDTVK 180

Query: 181 QDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHF 240
           QD  +++E  ST+  ++GK+MTK++ME RFPRLAEEIELD+KW+PLLDYLTTFGLKESHF
Sbjct: 181 QDFNVDKEVRSTHTGRKGKMMTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHF 240

Query: 241 LQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAF 300
           LQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQILEYTVENNLKSHVAF
Sbjct: 241 LQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAF 300

Query: 301 LLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILV 360
           LLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILV
Sbjct: 301 LLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILV 360

Query: 361 QRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSE 420
           QRID+SWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSE
Sbjct: 361 QRIDISWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSE 420

Query: 421 ILK-------VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 480
           ILK       VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL
Sbjct: 421 ILKVSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 480

Query: 481 VSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           VSLKKAPKGPFPLSSFVPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 481 VSLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 532

[Close]

BLAST of Carg12860 vs. ExPASy TrEMBL
Match: A0A6J1CG65 (transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010507 PE=3 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 8.7e-229
Identity = 444/536 (82.84%), Postives = 464/536 (86.57%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASLFL SFSPTI SDFPSSSDFY S QF  SSS+S  KF          RRRSV  F+V
Sbjct: 1   MASLFLSSFSPTIYSDFPSSSDFYLSAQFPLSSSSSVSKF----------RRRSVRGFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGE--DVDDLSSDDDDDDDDDTWLYNGNVSD 120
           RSTHSNAR+LKPKRRSRFGQ LSPFD D DGE  DVDD SSD DDDD        G  SD
Sbjct: 61  RSTHSNARLLKPKRRSRFGQILSPFDCDGDGEDVDVDDFSSDGDDDD--------GEFSD 120

Query: 121 VEYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSN----------RFDLQDITNDT 180
           VEYD KRKRAKLQ+RTRN+ SQRDNLRHPRESRGIRSSN            D QD+ NDT
Sbjct: 121 VEYDAKRKRAKLQSRTRNNGSQRDNLRHPRESRGIRSSNSGKSFKVKADHLDFQDLVNDT 180

Query: 181 ENQDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKES 240
           + QD +IEEE  ST+++ +GKLMTK++ME RFPRLAEEIELD KW+PLLDYLTTFGLKES
Sbjct: 181 DKQDFSIEEEVRSTSINGKGKLMTKKSMETRFPRLAEEIELDDKWFPLLDYLTTFGLKES 240

Query: 241 HFLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHV 300
           HFLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRR+L+RQPQILEYTVENNLKSHV
Sbjct: 241 HFLQMYERHMPSLQINVLSAQERLEYLLSVGVKQRDVRRMLLRQPQILEYTVENNLKSHV 300

Query: 301 AFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQI 360
           AFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQI
Sbjct: 301 AFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQI 360

Query: 361 LVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRN 420
           LVQRIDVSWNTRYMFLSKEIGAPRD+VVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRN
Sbjct: 361 LVQRIDVSWNTRYMFLSKEIGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRN 420

Query: 421 SEILK-------VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHR 480
           SEILK       V SLSLEDNLKPKY YLINELRNEV+SLTKYPMYLSLSLDQRIRPRHR
Sbjct: 421 SEILKVLTSLTQVLSLSLEDNLKPKYKYLINELRNEVQSLTKYPMYLSLSLDQRIRPRHR 480

Query: 481 FLVSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 518
           FLVSLKKAPKGPFPLSS VPTDECFCQQWAETSLDKYLEFR+RLLLKEFAQKYERR
Sbjct: 481 FLVSLKKAPKGPFPLSSLVPTDECFCQQWAETSLDKYLEFRQRLLLKEFAQKYERR 518

[Close]

BLAST of Carg12860 vs. ExPASy TrEMBL
Match: A0A0A0K3I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.3e-228
Identity = 436/535 (81.50%), Postives = 467/535 (87.29%), Query Frame = 0


Query: 1   MASLFLFSFSPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFLV 60
           MASL LFSFSPT+ S FPSSSDFY  +QFL +SS  +           R RRR+V RF+V
Sbjct: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGS-----------RSRRRNVPRFVV 60

Query: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDVE 120
           RSTHS+A ILKPKRRSRFG+ LSPFDSD+DG DVD+ SS   D DDDD W  NG+ SDVE
Sbjct: 61  RSTHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEFSS---DGDDDDAWPDNGDFSDVE 120

Query: 121 YDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRS----------SNRFDLQDITNDTEN 180
           YD KRKRAKLQ++TRN+NSQRDN+RHPRESRGI+S          SN  D QDITNDT  
Sbjct: 121 YDAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVK 180

Query: 181 QDDTIEEEAGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHF 240
            D  I+EE  STN  ++GK+MTK++ME RFPRLAEEI+LD+KW+PLL+YLTTFGLKESHF
Sbjct: 181 HDFNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHF 240

Query: 241 LQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAF 300
           LQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQILEYTVENNLKSHVAF
Sbjct: 241 LQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAF 300

Query: 301 LLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILV 360
           LLSLGIP SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILV
Sbjct: 301 LLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILV 360

Query: 361 QRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSE 420
           QRID SWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSE
Sbjct: 361 QRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSE 420

Query: 421 ILK-------VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 480
           ILK       VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL
Sbjct: 421 ILKVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 480

Query: 481 VSLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 519
           VSLKKAPKGPFPLSSFVPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 481 VSLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 521

[Close]

BLAST of Carg12860 vs. TAIR 10
Match: AT5G55580.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 573.9 bits (1478), Expect = 1.3e-163
Identity = 324/526 (61.60%), Postives = 389/526 (73.95%), Query Frame = 0


Query: 1   MASLFLFSF-SPTIQSDFPSSSDFYPSTQFLYSSSTSACKFHGVGIASRRRRRRSVHRFL 60
           MA   L+ F +P I    PS S        L+   +  C        + RR  R    F+
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESP-------LFVLGSDKCS------PATRRPSRKTRGFV 60

Query: 61  VRSTHSNARILKPKRRSRFGQNLSPFDSDDDGEDVDDLSSDDDDDDDDDTWLYNGNVSDV 120
           V   HSN +I+ PK++SR+GQ LSP+DSD+D         DDDDDDDDD WL N + ++V
Sbjct: 61  VTYAHSNPKIINPKKKSRYGQTLSPYDSDED--------DDDDDDDDDDDWLLNDDFAEV 120

Query: 121 -EYDTKRKRAKLQNRTRNSNSQRDNLRHPRESRGIRSSNRFDLQDITNDTENQDDTIEEE 180
            EY+  +K+ K   +T    S +  +  P ES      +  DL    N T       E++
Sbjct: 121 TEYE--KKKPKSHKQTIAKKSVKKGIVKPEESE--TDEDDLDLGISPNATS------EKK 180

Query: 181 AGSTNVDKQGKLMTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRM 240
             S  +D +GK+ +++ +E  +PRLAEEI++D K  PLLDYL+TFGLKESHF+QMYER M
Sbjct: 181 KESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHM 240

Query: 241 PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN 300
           PSLQINV SAQERL+YLLSVGVK RD++R+L+RQPQIL+YTVENNLK+H++FL+ LGIPN
Sbjct: 241 PSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPN 300

Query: 301 SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN 360
           S++GQI+AA PSLFSYSVENSL+PT+RYL+EEVGIKE D+GKVVQLSPQILVQR+D++WN
Sbjct: 301 SKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWN 360

Query: 361 TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILK----- 420
           TRYMFLSKE+GAPRD+VVKMV KHPQLLHYSIDDG LPRINFLRSIGM NS+ILK     
Sbjct: 361 TRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSL 420

Query: 421 --VFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPK 480
             V SLSLEDNLKPKYMYL+NEL NEV  LTKYPMYLSLSLDQRIRPRHRFLV LKK  K
Sbjct: 421 TQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRK 480

Query: 481 GPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 518
           GPFPLSS VP DE FCQQWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 GPFPLSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]

BLAST of Carg12860 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.4e-23
Identity = 70/257 (27.24%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 217 LDYLTTFGLKESHFLQM---YERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQP 276
           +D+    G+ ++ F  M   Y + +      V   ++++ YL   G+   +V R+L  +P
Sbjct: 320 VDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQV--MEKKINYLKEFGLSTEEVGRLLAYKP 379

Query: 277 QILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI 336
            ++  ++E   K  V +   LGIP   + +I+   P L+   +E ++ P VR+L +E+GI
Sbjct: 380 HLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFL-QEMGI 439

Query: 337 KEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDG 396
             + +G ++   P +L   +        +FL    G  + ++ K++   P LL  SI   
Sbjct: 440 PNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTK 499

Query: 397 LLPRINFLRSIGMR---NSEILKVFSLSLE---DNLKPKYMYLINELRNEVKSLTKYPMY 456
           L P + +  S+G+R     E++  F + L    DNL+PKY YL   +   ++ L ++P +
Sbjct: 500 LEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRF 559

Query: 457 LSLSLDQRIRPRHRFLV 465
            S SL++RI PRH  +V
Sbjct: 560 FSYSLERRIIPRHTIMV 573

[Close]

BLAST of Carg12860 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-21
Identity = 64/223 (28.70%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 249 QERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAA 308
           +E+L YL  + V   D  + L   P +    + +++ S    L S G+    VG+I+   
Sbjct: 33  REKLIYLQDLNV---DPHKALRVNPSLRSAPI-SSVVSVETLLSSTGLSRPAVGRILDMF 92

Query: 309 PSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEI 368
           P L +   E+ + P +R+L  E+ I E+D+ K +   P++L+  +D        FL    
Sbjct: 93  PDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLG 152

Query: 369 GAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFL-RSIGMRNSEILK-------VFSLSLE 428
              RD +    +++  LL  +++  L+P+I +L   +G    E+ K       + + S++
Sbjct: 153 FVGRDTI---TSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 212

Query: 429 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 464
           +NL PK  + I E+R +VK L ++P Y S SL+++I+PRHR L
Sbjct: 213 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLL 248

[Close]

BLAST of Carg12860 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-20
Identity = 63/232 (27.16%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 239 PSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPN 298
           PS+Q N +       +  S  V + D+   + R P +L  +  +N++  V     LG+ +
Sbjct: 330 PSIQENYSHIG---SFFYSESVLKMDIDHAIRRWPLLLGCSA-SNMEMMVKEFDKLGVRD 389

Query: 299 SRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWN 358
            R+G++I   P L     +  LK  V   +E++G +++ +G+++   P+I    I+ +  
Sbjct: 390 KRMGKVIPKMPQLLLCKPQEFLK--VVCFLEDLGFQKEIVGQILCRCPEIFGCSIEKTLQ 449

Query: 359 TRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEIL------ 418
            + +FL++  G    +  +++ K+P+ L Y  D  +LPR+ +L  IG+   EI       
Sbjct: 450 KKLIFLTR-FGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKF 509

Query: 419 -KVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 464
             +   S++  L+PK+ +L+N +   V+ + +YP Y S SL++RI+PR R L
Sbjct: 510 SPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVL 554

[Close]

BLAST of Carg12860 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-20
Identity = 65/234 (27.78%), Postives = 120/234 (51.28%), Query Frame = 0


Query: 198 NRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQERLEYLL- 257
           +R P++   + LD++  P+++ L++ G           +  P L    +S +E+L  LL 
Sbjct: 64  SRCPKIL-TLRLDERLIPMVECLSSLGRNPREVASAITKFPPILS---HSVEEKLCPLLA 123

Query: 258 ---SVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGI-PNSRVGQIIAAAPSLF 317
              ++GV +  + ++++  P+++ Y+++  L   V+FL SLG+  +  +G+++   P L 
Sbjct: 124 FFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLM 183

Query: 318 SYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGAPR 377
            YSV+  L+PT  +L   VG+ E  +  VV   PQ+L + ++      Y +L KE G   
Sbjct: 184 GYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL-KECGFGD 243

Query: 378 DNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVFSLSLEDNLKPK 427
             +  MVT +PQ+L  S+ + L PRI FL  +  R  + +  +       LK K
Sbjct: 244 SQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKK 292

The following BLAST results are available for this feature:

BLAST of Carg12860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024959.1	1.0e-284	100.00	Transcription termination factor MTERF9, chloroplastic [Cucurbita argyrosperma s...	[more]
XP_022936628.1	2.0e-280	97.92	transcription termination factor MTERF9, chloroplastic [Cucurbita moschata]	[more]
XP_022976275.1	1.8e-276	96.96	transcription termination factor MTERF9, chloroplastic [Cucurbita maxima]	[more]
XP_023536515.1	1.8e-276	96.95	transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pe...	[more]
KAG6592082.1	1.9e-246	97.67	Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyr...	[more]

BLAST of Carg12860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	1.8e-162	61.60	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	4.7e-22	27.24	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	4.4e-20	28.70	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9SZL6	3.8e-19	27.78	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q6AUK6	4.6e-17	22.30	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]

BLAST of Carg12860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDR7	9.8e-281	97.92	transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1IJ03	8.6e-277	96.96	transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=36...	[more]
A0A1S3CI38	9.0e-234	82.62	transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A6J1CG65	8.7e-229	82.84	transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX...	[more]
A0A0A0K3I9	4.3e-228	81.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1	[more]

BLAST of Carg12860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55580.1	1.3e-163	61.60	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	3.4e-23	27.24	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	3.2e-21	28.70	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	2.7e-20	27.16	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	2.7e-20	27.78	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..182
None	No IPR available	PANTHER	PTHR13068:SF151	TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC	coord: 49..510
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 266..297 e-value: 5.5E-5 score: 32.6 coord: 409..437 e-value: 93.0 score: 11.9 coord: 376..407 e-value: 1.1E-6 score: 38.3 coord: 231..261 e-value: 2300.0 score: 1.0 coord: 339..371 e-value: 19.0 score: 14.2 coord: 438..469 e-value: 8.6E-4 score: 28.6 coord: 302..334 e-value: 3.5E-5 score: 33.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 211..292 e-value: 3.5E-9 score: 36.0 coord: 281..467 e-value: 2.6E-31 score: 108.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 49..510
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 275..505 e-value: 6.4E-52 score: 178.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12860-RA	Carg12860-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding