Carg12572 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12572
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr14: 667123 .. 670131 (-)
RNA-Seq Expression	Carg12572
Synteny	Carg12572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGCTCCAAATCCGGCCCCCAAACAGCAACAACAATCCCCTTATCTCCCAATCCCTCGAAGACCTTCTCTTCGATGTCGCGAATCTCTCCGACGACGACAACGATGAGAACAAAACACAGCTCGCCAAAGAGGAATCGAAGCTCGAGAAAGAGATTATTCGCATCATTCTCGCCGGAAATTCCGATTCCCTAAAACCCAATTCCGGCCAAGCCGTCACGATCGGCGAGCACCACATATGTGTGGGGTTTCACGAGGAGAAGGACTCGGGATATCGAGTTTGGGAATGGCACGGCCACATTATGTTGTTTGATGAAGAAAATGGGTACACGCCGGAGTATATATATGGGAATTACCTTGAGAATCTTCAGGGGAAGGTCTACCGTGAGTTACATAAACTAAAGGAGGAAGAAGAGAAGGAGAACGAAGAGGAAGAAGAGGAGAAGGTGGGCGAATTGGGTCTTCGGGAGCTGATTAATGGCGGTGATTCGAGCGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATACTTAAATCTCAATTTTTCTGACATTCTTTAGAAAAACAGCTCTTCAATGGAGTTTTGAAATAGCCACTTAGTTTTTTATTCTCAAATGCCATTGATATATGTTTGTTCCTGATATCTTGGTATGATTTTAATTTGTGTATGTCATAGAGTTATCTACCCTTCGTGAAGTTCATGGAGTAAACCATTTCTCTCTCAAGTCCTGTAGTTATTGTATGTTTAGACATTGGTTCACCTCTGTCGGTAGAGAACTATTTTCACTGATTATGTAAAGGACTTAGGGATGGAAAGGTACAGGCATATCATATGTCTGTTGTTTGATGAGGTTTGAGAGTTGGCAATGTTCAATCCTCCTTCCTCCTTGTGGGTGTCGGTCACTACACTTTATGCATGAGATGTGTAACCGTCCAAGCCCATTGCTAGTAGATATTGTCCTATATGAGCTAGGCTTTCCCTCAATGTTTTAAAACGTGTCTGTTAGGGAAAGGTTTCGAGACCCTTATGAGGAATGTTTCGTTCCCTTCTCCAATCGATGTGGGATCTCTCAATTCACCCTCTTTGGGGACCCAGCGTCCTCGCTAGCACACCATCCGGTGTCTAGCTCTGATACCATTTGTAATAGCCCAAAAACCTTGAGAGGAAGCTCAAAAGGGAAAATTCACAGAGTACAATATCTACTCGCAGTGGACTTGCGCTGTTACAAGATGTTTATAGTTATCATCATTGTTAGTAGTTACTCCATGGTGGTAGATGGAGCTATGGAAGTAAGCAAGGACTAGAAGGAGTTTATCTGAAGCCTAACTGATAGTTTGCCAGAGGATGTGCTATAATTGAGTAGACATTACAATAGTAGAAGCTTAGCCACATGAAATCTCCAATTGTGATTTTCTTTGCGTCCCATTGGGATTATCCTCCACAGATGACCATTAGAACAGCCTTATATTTGGGAAACAAGAAATCTTTAGAACCTACCAGAAATGACCCGAATCCTAGATAGGTTGTCGCTGATTGTTCGTATAATGCAGTTTTAAAATCGATTTCGCATCTTTTCATACTCCGAATGCCATGAAGAAAACAAGTAGTTGATGCGAGAAATTTAGAACTGCCATATATTTACTTGCATACTGCAAAATGTTTTGAACGAAGTAACTGTTGCAAGGAAGCTTTCCACTATATTTGCACAATCTTATTGGCAGGATATGGCAAAGTTCAGGACATGGTTTATTTTTCAGGAAATTTACGGTAACCCTGAATGGTCTGTTTGGTGCATTTGCTCATAATTGTTTCTTGCATGCTTTAAATTCTGAAAGACCATATGTGAGGTTGCGTTGTTGCTAGATTGTGCTAATTGGAAACTTGGAGTTTTAATGAGCCGTTCCTTTTTCTGAATACCTGGGATTTAGAGCTATGCCCAGGGGGCACCCACGCCCACCCCCAAGGCCTTCGCTAACTCGCTGTTCGTCTTGGAAACTTGGACAAGACCTTGTGACTTCATTGTGACTTCACTGTGCTCCTACTCTTATAAAGCTATAAAAAAAGACCAAATGAATTTCTTACGGTACTCGGCTTCTTCTTTCTAGATCAAGTCCCAAGTTAGATCAGAGAGCGAAAGCAGTAGTAGGGTTGGAGGCACCTACGTGGCTGGATCTGTTCTAGATCCGGCCACGAAATCCTCTGGTTGTGGGTTGTCTTCTTAATATTAAGGGTTTTTGGTATAAGTTTGCCTGAAGGTTCGTACTTCAAACCGCTAAGCCGGTATGACTAAGAGACCCCAAACCCTTACCAATGGACTTTTAGGTTCTCCCTCTTCTGGCTTGAATTTGAAAGAAGATTCAAATCACTTTCAGACATGGACTCATGCTTATGCCATTGCTGTTAAATAGAATCACTTTCACTATTGACTTTGTTCGTATAGATCTTGAATATTTCAATCATGATTATTAGTTTGCTGTTCTTACTTGATGCTCATACATTTATTCCGATCGACAGGTTTTAGTCAGCTGAGTTGCAGTCTTTCGATCAGTATAAGAAGGTCGGACATCGAAGAACGTTGCTATGGACTACCATTTTACAGATTGCAGCTGGGTGTTCCTGCAGTTAGGACTCTGAACTTCATGTGTATTGTGGGAAGTCAGGGAGATGAATGCATAGATTCAGTAACATTCACTCTGTTTGATGAGTTTGTTCTTGATCATTTTGAATAAATATTCTCTCTTTGCTCTTTTCAGCTCACTTCTACGGTTCTACTGTGTTGTGTATTTGGTCATTTCTTTAAGGATTCTTTGTCTGCTTCTTGCATTTTATAGATTTGATCGGCAAACGGTCAACAATTAGACATTCAATGACTCTGACATTCTTTTGCATTATGATTATATTATCCATTTTTCGCTTTTAAAGAAAATTCTTAGGCTGTCTTCGACGCTAAATTGTTTCGAGTCAATCGTGTACCTTACTCATTCT

mRNA sequence

ATGGGGAGGCTCCAAATCCGGCCCCCAAACAGCAACAACAATCCCCTTATCTCCCAATCCCTCGAAGACCTTCTCTTCGATGTCGCGAATCTCTCCGACGACGACAACGATGAGAACAAAACACAGCTCGCCAAAGAGGAATCGAAGCTCGAGAAAGAGATTATTCGCATCATTCTCGCCGGAAATTCCGATTCCCTAAAACCCAATTCCGGCCAAGCCGTCACGATCGGCGAGCACCACATATGTGTGGGGTTTCACGAGGAGAAGGACTCGGGATATCGAGTTTGGGAATGGCACGGCCACATTATGTTGTTTGATGAAGAAAATGGGTACACGCCGGAGTATATATATGGGAATTACCTTGAGAATCTTCAGGGGAAGGTCTACCGTGAGTTACATAAACTAAAGGAGGAAGAAGAGAAGGAGAACGAAGAGGAAGAAGAGGAGAAGGTGGGCGAATTGGGTCTTCGGGAGCTGATTAATGGCGGTGATTCGAGCGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGATATGGCAAAGTTCAGGACATGGTTTATTTTTCAGGAAATTTACGATCAAGTCCCAAGTTAGATCAGAGAGCGAAAGCAGTAGTAGGGTTGGAGGCACCTACGTGGCTGGATCTGTTCTAGATCCGGCCACGAAATCCTCTGGTTTTAGTCAGCTGAGTTGCAGTCTTTCGATCAGTATAAGAAGGTCGGACATCGAAGAACGTTGCTATGGACTACCATTTTACAGATTGCAGCTGGGTGTTCCTGCAGTTAGGACTCTGAACTTCATGTGTATTGTGGGAAGTCAGGGAGATGAATGCATAGATTCAGTAACATTCACTCTGTTTGATGAGTTTGTTCTTGATCATTTTGAATAAATATTCTCTCTTTGCTCTTTTCAGCTCACTTCTACGGTTCTACTGTGTTGTGTATTTGGTCATTTCTTTAAGGATTCTTTGTCTGCTTCTTGCATTTTATAGATTTGATCGGCAAACGGTCAACAATTAGACATTCAATGACTCTGACATTCTTTTGCATTATGATTATATTATCCATTTTTCGCTTTTAAAGAAAATTCTTAGGCTGTCTTCGACGCTAAATTGTTTCGAGTCAATCGTGTACCTTACTCATTCT

Coding sequence (CDS)

ATGGGGAGGCTCCAAATCCGGCCCCCAAACAGCAACAACAATCCCCTTATCTCCCAATCCCTCGAAGACCTTCTCTTCGATGTCGCGAATCTCTCCGACGACGACAACGATGAGAACAAAACACAGCTCGCCAAAGAGGAATCGAAGCTCGAGAAAGAGATTATTCGCATCATTCTCGCCGGAAATTCCGATTCCCTAAAACCCAATTCCGGCCAAGCCGTCACGATCGGCGAGCACCACATATGTGTGGGGTTTCACGAGGAGAAGGACTCGGGATATCGAGTTTGGGAATGGCACGGCCACATTATGTTGTTTGATGAAGAAAATGGGTACACGCCGGAGTATATATATGGGAATTACCTTGAGAATCTTCAGGGGAAGGTCTACCGTGAGTTACATAAACTAAAGGAGGAAGAAGAGAAGGAGAACGAAGAGGAAGAAGAGGAGAAGGTGGGCGAATTGGGTCTTCGGGAGCTGATTAATGGCGGTGATTCGAGCGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGATATGGCAAAGTTCAGGACATGGTTTATTTTTCAGGAAATTTACGATCAAGTCCCAAGTTAGATCAGAGAGCGAAAGCAGTAGTAGGGTTGGAGGCACCTACGTGGCTGGATCTGTTCTAGATCCGGCCACGAAATCCTCTGGTTTTAGTCAGCTGAGTTGCAGTCTTTCGATCAGTATAAGAAGGTCGGACATCGAAGAACGTTGCTATGGACTACCATTTTACAGATTGCAGCTGGGTGTTCCTGCAGTTAGGACTCTGAACTTCATGTGTATTGTGGGAAGTCAGGGAGATGAATGCATAGATTCAGTAACATTCACTCTGTTTGATGAGTTTGTTCTTGATCATTTTGAATAA

Protein sequence

MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNYLENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQRIWQSSGHGLFFRKFTIKSQVRSESESSSRVGGTYVAGSVLDPATKSSGFSQLSCSLSISIRRSDIEERCYGLPFYRLQLGVPAVRTLNFMCIVGSQGDECIDSVTFTLFDEFVLDHFE

Homology

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BLAST of Carg12572 vs. NCBI nr
Match: KAG7017319.1 (hypothetical protein SDJN02_19182, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.5 bits (1521), Expect = 8.1e-165
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 180
           LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ
Sbjct: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 180

Query: 181 RIWQSSGHGLFFRKFTIKSQVRSESESSSRVGGTYVAGSVLDPATKSSGFSQLSCSLSIS 240
           RIWQSSGHGLFFRKFTIKSQVRSESESSSRVGGTYVAGSVLDPATKSSGFSQLSCSLSIS
Sbjct: 181 RIWQSSGHGLFFRKFTIKSQVRSESESSSRVGGTYVAGSVLDPATKSSGFSQLSCSLSIS 240

Query: 241 IRRSDIEERCYGLPFYRLQLGVPAVRTLNFMCIVGSQGDECIDSVTFTLFDEFVLDHFE 300
           IRRSDIEERCYGLPFYRLQLGVPAVRTLNFMCIVGSQGDECIDSVTFTLFDEFVLDHFE
Sbjct: 241 IRRSDIEERCYGLPFYRLQLGVPAVRTLNFMCIVGSQGDECIDSVTFTLFDEFVLDHFE 299

[Close]

BLAST of Carg12572 vs. NCBI nr
Match: KAG6580566.1 (hypothetical protein SDJN03_20568, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 5.7e-94
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 180
            ENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ
Sbjct: 139 FENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 198

Query: 181 R 182
           R
Sbjct: 199 R 199

[Close]

BLAST of Carg12572 vs. NCBI nr
Match: XP_022982545.1 (uncharacterized protein LOC111481390 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 1.0e-90
Identity = 176/181 (97.24%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIR PNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRHPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 180
            ENLQGK YRELHK KEEE KENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ
Sbjct: 139 FENLQGKFYRELHKPKEEEVKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 198

Query: 181 R 182
           R
Sbjct: 199 R 199

[Close]

BLAST of Carg12572 vs. NCBI nr
Match: XP_023526470.1 (uncharacterized protein LOC111789960 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.4 bits (877), Expect = 3.9e-90
Identity = 178/186 (95.70%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGF EEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFDEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEE-----EEEEKVGELGLRELINGGDSSAGRILHRNV 180
            ENLQGKVYREL KLKEEEEKENEE     EEEEKVGELGLRELINGGDSSAGRILHRNV
Sbjct: 139 FENLQGKVYRELRKLKEEEEKENEEEEDGNEEEEKVGELGLRELINGGDSSAGRILHRNV 198

Query: 181 NASSQR 182
           NASSQR
Sbjct: 199 NASSQR 204

[Close]

BLAST of Carg12572 vs. NCBI nr
Match: XP_022934100.1 (uncharacterized protein LOC111441374 [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 2.5e-89
Identity = 178/186 (95.70%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEE DSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFHEE-DSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEE-----EEKVGELGLRELINGGDSSAGRILHRNV 180
            ENL GKVYRELHKLKEEEEKENEEEE     EEKVGELGLRELINGGDSSAGRILHRNV
Sbjct: 139 FENLLGKVYRELHKLKEEEEKENEEEEDGNEDEEKVGELGLRELINGGDSSAGRILHRNV 198

Query: 181 NASSQR 182
           NASSQR
Sbjct: 199 NASSQR 203

[Close]

BLAST of Carg12572 vs. ExPASy TrEMBL
Match: A0A6J1J2Z9 (uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.9e-91
Identity = 176/181 (97.24%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIR PNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRHPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 180
            ENLQGK YRELHK KEEE KENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ
Sbjct: 139 FENLQGKFYRELHKPKEEEVKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASSQ 198

Query: 181 R 182
           R
Sbjct: 199 R 199

[Close]

BLAST of Carg12572 vs. ExPASy TrEMBL
Match: A0A6J1F6Q3 (uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC111441374 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.2e-89
Identity = 178/186 (95.70%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA
Sbjct: 19  MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GNSDSLKPNSGQAVTIGEHHICVGFHEE DSGYRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GNSDSLKPNSGQAVTIGEHHICVGFHEE-DSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEE-----EEKVGELGLRELINGGDSSAGRILHRNV 180
            ENL GKVYRELHKLKEEEEKENEEEE     EEKVGELGLRELINGGDSSAGRILHRNV
Sbjct: 139 FENLLGKVYRELHKLKEEEEKENEEEEDGNEDEEKVGELGLRELINGGDSSAGRILHRNV 198

Query: 181 NASSQR 182
           NASSQR
Sbjct: 199 NASSQR 203

[Close]

BLAST of Carg12572 vs. ExPASy TrEMBL
Match: A0A6J1CVB7 (uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015123 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.1e-80
Identity = 159/188 (84.57%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIRPPN NNNPL+SQSLEDLLFD ANLSDDDND+NKTQLAKEESKLEKEIIR+IL 
Sbjct: 19  MGRLQIRPPN-NNNPLLSQSLEDLLFDAANLSDDDNDDNKTQLAKEESKLEKEIIRVILT 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GN+DSLKPNSGQAVTIGEHHICVGFHEEKDS YRVWEWHGHIMLFDEENGY+PEYIYGNY
Sbjct: 79  GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEE-------EEEEKVGELGLRELINGGDSSAGRILHR 180
            E LQGKV REL+K KEE+E+E EE       E++EKVG+LGLRELI+GGDSS GRILHR
Sbjct: 139 FERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGLRELIDGGDSSGGRILHR 198

Query: 181 NVNASSQR 182
           NVNASSQR
Sbjct: 199 NVNASSQR 205

[Close]

BLAST of Carg12572 vs. ExPASy TrEMBL
Match: A0A6J1F855 (uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC111441746 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.8e-77
Identity = 154/183 (84.15%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIR P SNNNPL++QSLEDLLFD ANLSDDDNDENKTQLAKEES LEKEIIR+IL 
Sbjct: 19  MGRLQIR-PQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQLAKEESMLEKEIIRVILG 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GN DSLKPNSGQAVTIGEHHICVGFHEEKDS YRVWEWHGHIMLFDEENGY+PEYIYGNY
Sbjct: 79  GNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLK--EEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNAS 180
            E LQGKV REL+K +  EEEE+++++E+EE+VG+LGLRELI+GGDSS GRILHRNVNAS
Sbjct: 139 FERLQGKVNRELNKKEAAEEEEEDDDDEKEEEVGKLGLRELIDGGDSSGGRILHRNVNAS 198

Query: 181 SQR 182
           SQR
Sbjct: 199 SQR 200

[Close]

BLAST of Carg12572 vs. ExPASy TrEMBL
Match: A0A6J1KW97 (uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 6.9e-77
Identity = 152/182 (83.52%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           MGRLQIR P SNNNP+++QSLEDLLFD ANLSDDDNDENKTQLAKEES LEKEIIR+IL 
Sbjct: 19  MGRLQIR-PQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQLAKEESMLEKEIIRVILG 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           GN+DSLKPNSGQAVTIGEHHICVGFHEEKDS YRVWEWHGHIMLFDEENGY+PEYIYGNY
Sbjct: 79  GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLK-EEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHRNVNASS 180
            E LQGKV REL+K + EEEE+E+++E+EE + +LGLRELI+GGDSS GRILHRNVNASS
Sbjct: 139 FERLQGKVNRELNKKEAEEEEEEDDDEKEENLSKLGLRELIDGGDSSGGRILHRNVNASS 198

Query: 181 QR 182
           QR
Sbjct: 199 QR 199

[Close]

BLAST of Carg12572 vs. TAIR 10
Match: AT3G53630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 218.8 bits (556), Expect = 6.0e-57
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0


Query: 1   MGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQLAKEESKLEKEIIRIILA 60
           +GRLQIRPPNS+    +SQSL+DLLF   +   DD+ E +T L +EE++LEKE+IR+I++
Sbjct: 19  LGRLQIRPPNSH---FLSQSLDDLLFKSDDSDGDDDGEGQTSLDREEARLEKELIRVIVS 78

Query: 61  GNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHIMLFDEENGYTPEYIYGNY 120
           G SDSLKPNSGQAVT+ EHHICVGFHE+++S YRVWEWHGHIMLFDEENGYTPEYIYGNY
Sbjct: 79  GRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRVWEWHGHIMLFDEENGYTPEYIYGNY 138

Query: 121 LENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHR-NVNASS 180
            E L  K+     ++++E++KE +EEE E    LGLRELI+GGD++ GRILHR N+N  S
Sbjct: 139 FERLPVKLPNN-RRVEKEKKKEMKEEEVE---NLGLRELIDGGDAAPGRILHRNNINIGS 194

Query: 181 QRI 183
            R+
Sbjct: 199 SRV 194

[Close]

BLAST of Carg12572 vs. TAIR 10
Match: AT4G18692.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 117 YGNYLENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHR-NV 176
           +GNY E L  K+    H  KE++    +E +EE+V   GLRELI+GGD++ GRILHR N+
Sbjct: 4   FGNYFERLPVKLPNNRHVEKEKK----KEVKEEEVENWGLRELIDGGDAAPGRILHRNNI 63

Query: 177 NASSQR 182
           N  S R
Sbjct: 64  NIGSSR 65

[Close]

BLAST of Carg12572 vs. TAIR 10
Match: AT3G53342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 117 YGNYLENLQGKVYRELHKLKEEEEKENEEEEEEKVGELGLRELINGGDSSAGRILHR-NV 176
           +GNY E L  K+    H  KE++    +E +EE+V   GLRELI+GGD + GRILHR N+
Sbjct: 4   FGNYFERLPVKLPNNRHVEKEKK----KEVKEEEVENWGLRELIDGGDVAPGRILHRNNI 63

Query: 177 NASSQR 182
           N  S R
Sbjct: 64  NIGSSR 65

The following BLAST results are available for this feature:

BLAST of Carg12572 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017319.1	8.1e-165	100.00	hypothetical protein SDJN02_19182, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580566.1	5.7e-94	99.45	hypothetical protein SDJN03_20568, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022982545.1	1.0e-90	97.24	uncharacterized protein LOC111481390 [Cucurbita maxima]	[more]
XP_023526470.1	3.9e-90	95.70	uncharacterized protein LOC111789960 [Cucurbita pepo subsp. pepo]	[more]
XP_022934100.1	2.5e-89	95.70	uncharacterized protein LOC111441374 [Cucurbita moschata]	[more]

BLAST of Carg12572 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2Z9	4.9e-91	97.24	uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390...	[more]
A0A6J1F6Q3	1.2e-89	95.70	uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A6J1CVB7	5.1e-80	84.57	uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1F855	1.8e-77	84.15	uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1KW97	6.9e-77	83.52	uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761...	[more]

BLAST of Carg12572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53630.1	6.0e-57	62.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18692.1	1.8e-05	48.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53342.1	4.1e-05	48.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..156
None	No IPR available	PANTHER	PTHR35286	EXPRESSED PROTEIN	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12572-RA	Carg12572-RA	mRNA