Carg12495 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12495
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Laccase
Location	Carg_Chr14: 378920 .. 379294 (-)
RNA-Seq Expression	Carg12495
Synteny	Carg12495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTTGGTGGGTTCGAGCTTTTCTCTTATTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCTGAGTCCAGAGTTCGCCATTACAAATTCAATGTAAGCCTTTCTTCTCTTTCAACTTTTCTTGGATATTGGTTTTAGAAAAAGAGAGCTTTTGAATGACTTATTTCTGTTATGGCTTGATTTTAATGAGTGATATTGACTCATATTGGATGGCAGGTGGTGTTGCGGAAGGCAACCAGACTTTGCTCAACCAAGCCCATTGTCACTGTCAATGGACAGTTCCCTGGACCAACCCTTTACGCTAGGGAGGGCGACACCGTGCTTGTCAAAGTCGTCAACCACGTCAAATATAACCTTTCAATTCACTGGTAA

mRNA sequence

ATGGAGTCTTGGTGGGTTCGAGCTTTTCTCTTATTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCTGAGTCCAGAGTTCGCCATTACAAATTCAATGTGGTGTTGCGGAAGGCAACCAGACTTTGCTCAACCAAGCCCATTGTCACTGTCAATGGACAGTTCCCTGGACCAACCCTTTACGCTAGGGAGGGCGACACCGTGCTTGTCAAAGTCGTCAACCACGTCAAATATAACCTTTCAATTCACTGGTAA

Coding sequence (CDS)

ATGGAGTCTTGGTGGGTTCGAGCTTTTCTCTTATTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCTGAGTCCAGAGTTCGCCATTACAAATTCAATGTGGTGTTGCGGAAGGCAACCAGACTTTGCTCAACCAAGCCCATTGTCACTGTCAATGGACAGTTCCCTGGACCAACCCTTTACGCTAGGGAGGGCGACACCGTGCTTGTCAAAGTCGTCAACCACGTCAAATATAACCTTTCAATTCACTGGTAA

Protein sequence

MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW

Homology

[Close]

BLAST of Carg12495 vs. NCBI nr
Match: XP_022934129.1 (laccase-4-like [Cucurbita moschata])

HSP 1 Score: 178.3 bits (451), Expect = 2.7e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGDTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREGDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. NCBI nr
Match: KAG7017242.1 (Laccase-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.3 bits (451), Expect = 2.7e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGDTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREGDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. NCBI nr
Match: XP_023526766.1 (laccase-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESW VRAFLLLAFCCLLPGLAESRVRHYKFNVVLRK TRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWRVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKTTRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGDTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREGDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. NCBI nr
Match: XP_038904173.1 (laccase-4-like [Benincasa hispida])

HSP 1 Score: 170.6 bits (431), Expect = 5.6e-39
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1   MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
           MESWWVRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPT+Y
Sbjct: 28  MESWWVRAFVLLAFCCLLPGLAESTVRHYKFNVVLRKATRLCSSKPIVTVNGQFPGPTIY 87

Query: 61  AREGDTVLVKVVNHVKYNLSIHW 84
           AREGD VLVKVVNHVKYNLSIHW
Sbjct: 88  AREGDNVLVKVVNHVKYNLSIHW 110

[Close]

BLAST of Carg12495 vs. NCBI nr
Match: XP_022983313.1 (laccase-4-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37
Identity = 79/83 (95.18%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESW V AFLLLAFCCLLPGLAESRVRHYK NVVLRKATRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWRVPAFLLLAFCCLLPGLAESRVRHYKLNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          ARE DTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREDDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy Swiss-Prot
Match: O80434 (Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 7.3e-26
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          M S  V    L++F  + P  +ES VRHYKFNVV++  TRLCS+KP VTVNG++PGPT+Y
Sbjct: 1  MGSHMVWFLFLVSFFSVFPAPSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          ARE DT+L+KVVNHVKYN+SIHW
Sbjct: 61 AREDDTLLIKVVNHVKYNVSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy Swiss-Prot
Match: Q0IQU1 (Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-25
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 8  AFLLLAFCCLLPGL-AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDT 67
          + LL+A C LL  L A +  RHYKFNVV+R  TRLCSTKPI+TVNG+FPGPTLYAREGD 
Sbjct: 11 SLLLMAACFLLQALSAHAITRHYKFNVVMRNMTRLCSTKPILTVNGKFPGPTLYAREGDN 70

Query: 68 VLVKVVNHVKYNLSIHW 84
          VLVKVVNHV +N++IHW
Sbjct: 71 VLVKVVNHVAHNVTIHW 87

[Close]

BLAST of Carg12495 vs. ExPASy Swiss-Prot
Match: Q1PDH6 (Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-23
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 14 FCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVN 73
          F  L P    S +RHYKFN V+   T+LCS+KPIVTVNGQFPGPT+ AREGDT+L+KVVN
Sbjct: 17 FVLLSPTTVHSIIRHYKFN-VMTNTTKLCSSKPIVTVNGQFPGPTIVAREGDTILIKVVN 76

Query: 74 HVKYNLSIHW 84
          HVKYN+SIHW
Sbjct: 77 HVKYNVSIHW 85

[Close]

BLAST of Carg12495 vs. ExPASy Swiss-Prot
Match: Q6ID18 (Laccase-10 OS=Arabidopsis thaliana OX=3702 GN=LAC10 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-21
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 9  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVL 68
          F LLAF    P      +R Y FNVV ++ TR+CSTK IVTVNG+FPGPT+YA E DT+L
Sbjct: 11 FALLAF----PACVHGAIRKYTFNVVTKQVTRICSTKQIVTVNGKFPGPTIYANEDDTIL 70

Query: 69 VKVVNHVKYNLSIHW 84
          V VVN+VKYN+SIHW
Sbjct: 71 VNVVNNVKYNVSIHW 81

[Close]

BLAST of Carg12495 vs. ExPASy Swiss-Prot
Match: Q8VZA1 (Laccase-11 OS=Arabidopsis thaliana OX=3702 GN=LAC11 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-19
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 11 LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDT 70
          L  FC LL  L     ++ V+ Y+F+V ++  +R+C+ KPIVTVNG FPGPT+YAREGD 
Sbjct: 6  LFLFCYLLAFLGYSPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDR 65

Query: 71 VLVKVVNHVKYNLSIHW 84
          V++ V NHV+YN+SIHW
Sbjct: 66 VIINVTNHVQYNMSIHW 82

[Close]

BLAST of Carg12495 vs. ExPASy TrEMBL
Match: A0A6J1F1N9 (Laccase OS=Cucurbita moschata OX=3662 GN=LOC111441394 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGDTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREGDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy TrEMBL
Match: A0A6J1J7E9 (Laccase OS=Cucurbita maxima OX=3661 GN=LOC111481928 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 79/83 (95.18%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MESW V AFLLLAFCCLLPGLAESRVRHYK NVVLRKATRLCSTKPIVTVNGQFPGPTLY
Sbjct: 1  MESWRVPAFLLLAFCCLLPGLAESRVRHYKLNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          ARE DTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREDDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy TrEMBL
Match: A0A6J1CWL9 (Laccase OS=Momordica charantia OX=3673 GN=LOC111015070 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.6e-37
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          MES WVRAF+LLA CCLLP LAESRVRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLY
Sbjct: 1  MESLWVRAFILLAICCLLPHLAESRVRHYKFNVVLRKATRLCSSKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          ARE DTVLVKVVNHVKYNLSIHW
Sbjct: 61 AREDDTVLVKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy TrEMBL
Match: A0A5D3DMZ0 (Laccase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001020 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          M S  VRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLY
Sbjct: 1  MGSSGVRAFVLLAFCCLLPGLAESTVRHYKFNVVLRKATRLCSSKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGD VL+KVVNHVKYNLSIHW
Sbjct: 61 AREGDNVLIKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. ExPASy TrEMBL
Match: A0A1S3B5Q7 (Laccase OS=Cucumis melo OX=3656 GN=LOC103486322 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          M S  VRAF+LLAFCCLLPGLAES VRHYKFNVVLRKATRLCS+KPIVTVNGQFPGPTLY
Sbjct: 1  MGSSGVRAFVLLAFCCLLPGLAESTVRHYKFNVVLRKATRLCSSKPIVTVNGQFPGPTLY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGD VL+KVVNHVKYNLSIHW
Sbjct: 61 AREGDNVLIKVVNHVKYNLSIHW 83

[Close]

BLAST of Carg12495 vs. TAIR 10
Match: AT2G38080.1 (Laccase/Diphenol oxidase family protein )

HSP 1 Score: 117.5 bits (293), Expect = 5.2e-27
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MESWWVRAFLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 60
          M S  V    L++F  + P  +ES VRHYKFNVV++  TRLCS+KP VTVNG++PGPT+Y
Sbjct: 1  MGSHMVWFLFLVSFFSVFPAPSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIY 60

Query: 61 AREGDTVLVKVVNHVKYNLSIHW 84
          ARE DT+L+KVVNHVKYN+SIHW
Sbjct: 61 AREDDTLLIKVVNHVKYNVSIHW 83

[Close]

BLAST of Carg12495 vs. TAIR 10
Match: AT5G01190.1 (laccase 10 )

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-22
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 9  FLLLAFCCLLPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVL 68
          F LLAF    P      +R Y FNVV ++ TR+CSTK IVTVNG+FPGPT+YA E DT+L
Sbjct: 11 FALLAF----PACVHGAIRKYTFNVVTKQVTRICSTKQIVTVNGKFPGPTIYANEDDTIL 70

Query: 69 VKVVNHVKYNLSIHW 84
          V VVN+VKYN+SIHW
Sbjct: 71 VNVVNNVKYNVSIHW 81

[Close]

BLAST of Carg12495 vs. TAIR 10
Match: AT5G03260.1 (laccase 11 )

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-20
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 11 LLAFCCLLPGL----AESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLYAREGDT 70
          L  FC LL  L     ++ V+ Y+F+V ++  +R+C+ KPIVTVNG FPGPT+YAREGD 
Sbjct: 6  LFLFCYLLAFLGYSPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDR 65

Query: 71 VLVKVVNHVKYNLSIHW 84
          V++ V NHV+YN+SIHW
Sbjct: 66 VIINVTNHVQYNMSIHW 82

[Close]

BLAST of Carg12495 vs. TAIR 10
Match: AT5G58910.1 (laccase 16 )

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-19
Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 35 LRKATRLCSTKPIVTVNGQFPGPTLYAREGDTVLVKVVNHVKYNLSIHW 84
          +   T+LCS+KPIVTVNGQFPGPT+ AREGDT+L+KVVNHVKYN+SIHW
Sbjct: 1  MTNTTKLCSSKPIVTVNGQFPGPTIVAREGDTILIKVVNHVKYNVSIHW 49

[Close]

BLAST of Carg12495 vs. TAIR 10
Match: AT2G29130.1 (laccase 2 )

HSP 1 Score: 91.3 bits (225), Expect = 4.0e-19
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 5  WVRAFLLLAFCCL----LPGLAESRVRHYKFNVVLRKATRLCSTKPIVTVNGQFPGPTLY 64
          WV  +LL+AF       +   +    RHY+F++ L+  TRLC TK IVTVNG+FPGP + 
Sbjct: 4  WVLNYLLVAFLFAISYNIDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVT 63

Query: 65 AREGDTVLVKVVNHVKYNLSIHW 84
          AREGD + +KVVNHV  N+SIHW
Sbjct: 64 AREGDNLQIKVVNHVSNNISIHW 86

The following BLAST results are available for this feature:

BLAST of Carg12495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934129.1	2.7e-41	100.00	laccase-4-like [Cucurbita moschata]	[more]
KAG7017242.1	2.7e-41	100.00	Laccase-4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023526766.1	3.3e-39	97.59	laccase-4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038904173.1	5.6e-39	93.98	laccase-4-like [Benincasa hispida]	[more]
XP_022983313.1	2.3e-37	95.18	laccase-4-like [Cucurbita maxima]	[more]

BLAST of Carg12495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80434	7.3e-26	63.86	Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2	[more]
Q0IQU1	2.1e-25	71.43	Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2	[more]
Q1PDH6	3.4e-23	70.00	Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2	[more]
Q6ID18	5.4e-21	62.67	Laccase-10 OS=Arabidopsis thaliana OX=3702 GN=LAC10 PE=2 SV=1	[more]
Q8VZA1	3.0e-19	54.55	Laccase-11 OS=Arabidopsis thaliana OX=3702 GN=LAC11 PE=2 SV=1	[more]

BLAST of Carg12495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1N9	1.3e-41	100.00	Laccase OS=Cucurbita moschata OX=3662 GN=LOC111441394 PE=3 SV=1	[more]
A0A6J1J7E9	1.1e-37	95.18	Laccase OS=Cucurbita maxima OX=3661 GN=LOC111481928 PE=3 SV=1	[more]
A0A6J1CWL9	5.6e-37	92.77	Laccase OS=Momordica charantia OX=3673 GN=LOC111015070 PE=3 SV=1	[more]
A0A5D3DMZ0	1.8e-35	90.36	Laccase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001020 PE=3 ...	[more]
A0A1S3B5Q7	1.8e-35	90.36	Laccase OS=Cucumis melo OX=3656 GN=LOC103486322 PE=3 SV=1	[more]

BLAST of Carg12495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38080.1	5.2e-27	63.86	Laccase/Diphenol oxidase family protein	[more]
AT5G01190.1	3.9e-22	62.67	laccase 10	[more]
AT5G03260.1	2.1e-20	54.55	laccase 11	[more]
AT5G58910.1	3.1e-19	77.55	laccase 16	[more]
AT2G29130.1	4.0e-19	51.81	laccase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 24..83 e-value: 1.3E-14 score: 56.3
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 20..83
IPR011707	Multicopper oxidase, N-termianl	PFAM	PF07732	Cu-oxidase_3	coord: 37..83 e-value: 5.9E-14 score: 52.1
IPR045087	Multicopper oxidase	PANTHER	PTHR11709	MULTI-COPPER OXIDASE	coord: 5..83
None	No IPR available	PANTHER	PTHR11709:SF368	LACCASE	coord: 5..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12495-RA	Carg12495-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046274	lignin catabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0052716	hydroquinone:oxygen oxidoreductase activity